| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242083
Identifier: 148242083
GI number: 148242083
Start: 903258
End: 904223
Strand: Direct
Name: 148242083
Synonym: SynRCC307_0984
Alternate gene names: NA
Gene position: 903258-904223 (Clockwise)
Preceding gene: 148242082
Following gene: 148242104
Centisome position: 40.6
GC content: 61.59
Gene sequence:
>966_bases ATGACGTCATCGATGGGTCTTAGTGGTTCCAGCCTTGCGGGCCATCCCCCGCTGGAGGTGCGGCTGCTGCGCGATGGGAT GACCGAATCGGTGCACCGGGTGCATGCCGTGGTCTGTGACCAGCGCGGCCGCCTGTTGATGCGCGCTGGCGATGCCCAGC ATTTGAGCTTTATTCGTTCGGCGCTCAAGCCCTTTCAAGCCCAGACTTTTGTCTCCAGTGGTGCCCTGGATGCTCAAGGG GGCGCGGAGCGCGCAATGGCGATTGCTTGCGCCTCCCATGACGGCGGCAAAGACAAAGCCCGTGAAGCCTTCCAGATTCT CTGGCGGGCCGACATCGATGCGTCGATGTTGCGTTGCCCGGTCCCAGCGGGCAAAGAGAGCCCGCTGGAGCACAACTGCT CGGGAAAGCATGCGGCGTTTTTGGCCAGTTGCCGGCGCATGTGCTGGCCTTTGGAGGGCTACCTCAACAAAAATCACCCA TTGCAGCAGGAGCTGTTTGGCCGCATCGCTGAGCTCCTGGGGTTGCCAAAAGATGAACTGATCATCGCGAGCGATGACTG TGGCGCCCCCACCGTTCAGCTTCCTTTGAGTCAGATGGCGCTGCTGTTTGCCCACCTTGGGGCTGGAACGCTGCCCAACC TCGAGCGCTTGGTGCGCGCGATGCAGGCCCACCCCGAGCTGGTGGCAGGTGTTGGTCGTTTTGACACCGAGCTGATGCGC CGCGGCTTGGACATGCTGATCAGCAAAGGTGGCGCTGAGGGGATTCAATGCCTGGCCCGTGTGGGCGAGGGTCTTGGTTT GGCGATCAAGGTGGAAGACGGCGCGAGCCGCGCCAAGCGTGCGGTGGCTTTGCACCTCTTGCGTCAGTTGGATTGGCTCA CGCCCACCGCTTTGGAGGAACTGGAGCAGCAATTCATGATTCCGATGGCTGGTCAGCGGCTTGAGGTGATCGGCGAATTG GTTTGA
Upstream 100 bases:
>100_bases GCCTGTGCTGGGCCGTTTGCTGCGGGCTATCAGTGTTTTGGCTGCGCTACTGCTGTGGGGCGCCAGCCTCTGCCAGGCTC TTTGAGATCGGCACCGACGC
Downstream 100 bases:
>100_bases TTGGTTGCCAACTGTCGCCGTTGTCACCTAAGTTTTGGTTTCGGTTGCCGCGGGGTAGAGCAGCCTGGTAGCTCGTCGGG CTCATAACCCGAAGGTCGGG
Product: L-asparaginase II
Products: NA
Alternate protein names: L-Asparaginase; Asparaginase; L-Asparaginase Rmolabile; L-Asparaginase II Protein; L-Asparaginase Rmolabile Subfamily; L-Asparaginase Rmolabile Family; Fumarate Lyase; Asparaginase-Related Protein
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTSSMGLSGSSLAGHPPLEVRLLRDGMTESVHRVHAVVCDQRGRLLMRAGDAQHLSFIRSALKPFQAQTFVSSGALDAQG GAERAMAIACASHDGGKDKAREAFQILWRADIDASMLRCPVPAGKESPLEHNCSGKHAAFLASCRRMCWPLEGYLNKNHP LQQELFGRIAELLGLPKDELIIASDDCGAPTVQLPLSQMALLFAHLGAGTLPNLERLVRAMQAHPELVAGVGRFDTELMR RGLDMLISKGGAEGIQCLARVGEGLGLAIKVEDGASRAKRAVALHLLRQLDWLTPTALEELEQQFMIPMAGQRLEVIGEL V
Sequences:
>Translated_321_residues MTSSMGLSGSSLAGHPPLEVRLLRDGMTESVHRVHAVVCDQRGRLLMRAGDAQHLSFIRSALKPFQAQTFVSSGALDAQG GAERAMAIACASHDGGKDKAREAFQILWRADIDASMLRCPVPAGKESPLEHNCSGKHAAFLASCRRMCWPLEGYLNKNHP LQQELFGRIAELLGLPKDELIIASDDCGAPTVQLPLSQMALLFAHLGAGTLPNLERLVRAMQAHPELVAGVGRFDTELMR RGLDMLISKGGAEGIQCLARVGEGLGLAIKVEDGASRAKRAVALHLLRQLDWLTPTALEELEQQFMIPMAGQRLEVIGEL V >Mature_320_residues TSSMGLSGSSLAGHPPLEVRLLRDGMTESVHRVHAVVCDQRGRLLMRAGDAQHLSFIRSALKPFQAQTFVSSGALDAQGG AERAMAIACASHDGGKDKAREAFQILWRADIDASMLRCPVPAGKESPLEHNCSGKHAAFLASCRRMCWPLEGYLNKNHPL QQELFGRIAELLGLPKDELIIASDDCGAPTVQLPLSQMALLFAHLGAGTLPNLERLVRAMQAHPELVAGVGRFDTELMRR GLDMLISKGGAEGIQCLARVGEGLGLAIKVEDGASRAKRAVALHLLRQLDWLTPTALEELEQQFMIPMAGQRLEVIGELV
Specific function: Unknown
COG id: COG4448
COG function: function code E; L-asparaginase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34689; Mature: 34558
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSMGLSGSSLAGHPPLEVRLLRDGMTESVHRVHAVVCDQRGRLLMRAGDAQHLSFIRS CCCCCCCCCCCCCCCCCCEEEEHHCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHH ALKPFQAQTFVSSGALDAQGGAERAMAIACASHDGGKDKAREAFQILWRADIDASMLRCP HHHHHHHHHHHHCCCCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHCCC VPAGKESPLEHNCSGKHAAFLASCRRMCWPLEGYLNKNHPLQQELFGRIAELLGLPKDEL CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCE IIASDDCGAPTVQLPLSQMALLFAHLGAGTLPNLERLVRAMQAHPELVAGVGRFDTELMR EEEECCCCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHCCHHHHHHHH RGLDMLISKGGAEGIQCLARVGEGLGLAIKVEDGASRAKRAVALHLLRQLDWLTPTALEE HHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHH LEQQFMIPMAGQRLEVIGELV HHHHHCCCCCCCHHHHHHHCC >Mature Secondary Structure TSSMGLSGSSLAGHPPLEVRLLRDGMTESVHRVHAVVCDQRGRLLMRAGDAQHLSFIRS CCCCCCCCCCCCCCCCCEEEEHHCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHH ALKPFQAQTFVSSGALDAQGGAERAMAIACASHDGGKDKAREAFQILWRADIDASMLRCP HHHHHHHHHHHHCCCCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHCCC VPAGKESPLEHNCSGKHAAFLASCRRMCWPLEGYLNKNHPLQQELFGRIAELLGLPKDEL CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCE IIASDDCGAPTVQLPLSQMALLFAHLGAGTLPNLERLVRAMQAHPELVAGVGRFDTELMR EEEECCCCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHCCHHHHHHHH RGLDMLISKGGAEGIQCLARVGEGLGLAIKVEDGASRAKRAVALHLLRQLDWLTPTALEE HHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHH LEQQFMIPMAGQRLEVIGELV HHHHHCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA