Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242039

Identifier: 148242039

GI number: 148242039

Start: 861709

End: 862008

Strand: Direct

Name: 148242039

Synonym: SynRCC307_0940

Alternate gene names: NA

Gene position: 861709-862008 (Clockwise)

Preceding gene: 148242035

Following gene: 148242045

Centisome position: 38.73

GC content: 61.0

Gene sequence:

>300_bases
ATGAAGGTGATCGTTGATCTCTGCGTGGTTCCCATTGGCGTGGGAATCGATTTGGCTCCCTATGTGGCGGCGTGCCAGCA
GGTGCTGCTGCAGCGGGGGCTGAAGCACCAATTGGGGCCCAACTCCACCGCCATCGAAGGCGACTGGGGCCCGGTGATGG
ATGCCGTGAAGGCCTGTCATGAAGTGGTGCATGAGCTGGGTGCACCGCGCATCTTCACCAGCCTCAAGATCAACAGCCGC
ACCGACCGCGATCAAGCGTTGGAAGAGAAGACAGCCGCGGTGCAGAAGCTGCTGACCTAG

Upstream 100 bases:

>100_bases
ACGCGCCGCTCACCCAAGTGGGCGGCAACGCCCACCAGTTCCAGGTAGGGCGTTGGGCTCATGGCTTCATGATGCAGCGG
CGGCTGATTGAGCGCAGGCC

Downstream 100 bases:

>100_bases
GCCGCCACGAGGCCGGAATGGCGCAGCAGAGCCTGAGCCGATGGCGGCCGGCCGCGGAAGGCTGAAAACACATCCGCTGG
AGCCTCGCTGCCGCCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MKVIVDLCVVPIGVGIDLAPYVAACQQVLLQRGLKHQLGPNSTAIEGDWGPVMDAVKACHEVVHELGAPRIFTSLKINSR
TDRDQALEEKTAAVQKLLT

Sequences:

>Translated_99_residues
MKVIVDLCVVPIGVGIDLAPYVAACQQVLLQRGLKHQLGPNSTAIEGDWGPVMDAVKACHEVVHELGAPRIFTSLKINSR
TDRDQALEEKTAAVQKLLT
>Mature_99_residues
MKVIVDLCVVPIGVGIDLAPYVAACQQVLLQRGLKHQLGPNSTAIEGDWGPVMDAVKACHEVVHELGAPRIFTSLKINSR
TDRDQALEEKTAAVQKLLT

Specific function: Unknown

COG id: COG0011

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0045 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319472, Length=97, Percent_Identity=32.9896907216495, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002767
- InterPro:   IPR016198 [H]

Pfam domain/function: PF01910 DUF77 [H]

EC number: NA

Molecular weight: Translated: 10701; Mature: 10701

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIVDLCVVPIGVGIDLAPYVAACQQVLLQRGLKHQLGPNSTAIEGDWGPVMDAVKACH
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
EVVHELGAPRIFTSLKINSRTDRDQALEEKTAAVQKLLT
HHHHHHCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVIVDLCVVPIGVGIDLAPYVAACQQVLLQRGLKHQLGPNSTAIEGDWGPVMDAVKACH
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
EVVHELGAPRIFTSLKINSRTDRDQALEEKTAAVQKLLT
HHHHHHCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]