Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242045

Identifier: 148242045

GI number: 148242045

Start: 869547

End: 870020

Strand: Direct

Name: 148242045

Synonym: SynRCC307_0946

Alternate gene names: NA

Gene position: 869547-870020 (Clockwise)

Preceding gene: 148242039

Following gene: 148242046

Centisome position: 39.08

GC content: 61.18

Gene sequence:

>474_bases
ATGGGGATCTTACGCAGCACGGGTGTGCCCCGAGCCGTTTCCCAAGCAGATCAACCGTTGCGCCGGTTGGATCTGTCCTA
TCTGCTGTGGTGCCTGTCGCTGGTGGGCATCTGCGGTGTGCAGCGGATCTACAACCGCCGGCCCCTCAGTGGCGTGTTGT
ATCTGCTCAGCTTTGGGCTGCTGGGCATCGGCACGGTGGTGGATTTGTTTTTGATCCCCTCTTTGGTGCGCCATGCCAAT
GCCCCCACGCTGTTGGATCAGGCGCGCGCAGCGGTTGAGCCGATTGATCGCCAACTGCTGCTGCTGGCCCGCAGCAAAGG
TTCAGCCGGTTTCAGCCTCAATGACGCCGTTTTGGCATTGGATCCGGCCGTTGAGCTCGCTGAGCTGCGCCGTGTCTTGG
ACGACTTGCAACAGCACGAGCTGCTGCTGATCAGCAATGACGCGCAAGGGCGCGTGGTCTACCGGGAGCCTTAA

Upstream 100 bases:

>100_bases
ATGGCTCATGGAATGACGAATCTTGAGCAGCTGAGGGCTTTCGCTGGTCTTGGGAAGCGCCACGGCGGCTGCTGAAGACA
CCGACTCTTTTGCAGTGAGA

Downstream 100 bases:

>100_bases
ACCCTGGGTTGGTAACAGTTGTGGCTCAAATTGGACTCAGTTTCTACGTTTGTGTTATTGGGCTGAGTTGAATGACTGCC
ACCCCCCTGCAGCCACCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MGILRSTGVPRAVSQADQPLRRLDLSYLLWCLSLVGICGVQRIYNRRPLSGVLYLLSFGLLGIGTVVDLFLIPSLVRHAN
APTLLDQARAAVEPIDRQLLLLARSKGSAGFSLNDAVLALDPAVELAELRRVLDDLQQHELLLISNDAQGRVVYREP

Sequences:

>Translated_157_residues
MGILRSTGVPRAVSQADQPLRRLDLSYLLWCLSLVGICGVQRIYNRRPLSGVLYLLSFGLLGIGTVVDLFLIPSLVRHAN
APTLLDQARAAVEPIDRQLLLLARSKGSAGFSLNDAVLALDPAVELAELRRVLDDLQQHELLLISNDAQGRVVYREP
>Mature_156_residues
GILRSTGVPRAVSQADQPLRRLDLSYLLWCLSLVGICGVQRIYNRRPLSGVLYLLSFGLLGIGTVVDLFLIPSLVRHANA
PTLLDQARAAVEPIDRQLLLLARSKGSAGFSLNDAVLALDPAVELAELRRVLDDLQQHELLLISNDAQGRVVYREP

Specific function: Unknown

COG id: COG2314

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17234; Mature: 17103

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILRSTGVPRAVSQADQPLRRLDLSYLLWCLSLVGICGVQRIYNRRPLSGVLYLLSFGL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LGIGTVVDLFLIPSLVRHANAPTLLDQARAAVEPIDRQLLLLARSKGSAGFSLNDAVLAL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
DPAVELAELRRVLDDLQQHELLLISNDAQGRVVYREP
CCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECC
>Mature Secondary Structure 
GILRSTGVPRAVSQADQPLRRLDLSYLLWCLSLVGICGVQRIYNRRPLSGVLYLLSFGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LGIGTVVDLFLIPSLVRHANAPTLLDQARAAVEPIDRQLLLLARSKGSAGFSLNDAVLAL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
DPAVELAELRRVLDDLQQHELLLISNDAQGRVVYREP
CCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA