| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is 148242045
Identifier: 148242045
GI number: 148242045
Start: 869547
End: 870020
Strand: Direct
Name: 148242045
Synonym: SynRCC307_0946
Alternate gene names: NA
Gene position: 869547-870020 (Clockwise)
Preceding gene: 148242039
Following gene: 148242046
Centisome position: 39.08
GC content: 61.18
Gene sequence:
>474_bases ATGGGGATCTTACGCAGCACGGGTGTGCCCCGAGCCGTTTCCCAAGCAGATCAACCGTTGCGCCGGTTGGATCTGTCCTA TCTGCTGTGGTGCCTGTCGCTGGTGGGCATCTGCGGTGTGCAGCGGATCTACAACCGCCGGCCCCTCAGTGGCGTGTTGT ATCTGCTCAGCTTTGGGCTGCTGGGCATCGGCACGGTGGTGGATTTGTTTTTGATCCCCTCTTTGGTGCGCCATGCCAAT GCCCCCACGCTGTTGGATCAGGCGCGCGCAGCGGTTGAGCCGATTGATCGCCAACTGCTGCTGCTGGCCCGCAGCAAAGG TTCAGCCGGTTTCAGCCTCAATGACGCCGTTTTGGCATTGGATCCGGCCGTTGAGCTCGCTGAGCTGCGCCGTGTCTTGG ACGACTTGCAACAGCACGAGCTGCTGCTGATCAGCAATGACGCGCAAGGGCGCGTGGTCTACCGGGAGCCTTAA
Upstream 100 bases:
>100_bases ATGGCTCATGGAATGACGAATCTTGAGCAGCTGAGGGCTTTCGCTGGTCTTGGGAAGCGCCACGGCGGCTGCTGAAGACA CCGACTCTTTTGCAGTGAGA
Downstream 100 bases:
>100_bases ACCCTGGGTTGGTAACAGTTGTGGCTCAAATTGGACTCAGTTTCTACGTTTGTGTTATTGGGCTGAGTTGAATGACTGCC ACCCCCCTGCAGCCACCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MGILRSTGVPRAVSQADQPLRRLDLSYLLWCLSLVGICGVQRIYNRRPLSGVLYLLSFGLLGIGTVVDLFLIPSLVRHAN APTLLDQARAAVEPIDRQLLLLARSKGSAGFSLNDAVLALDPAVELAELRRVLDDLQQHELLLISNDAQGRVVYREP
Sequences:
>Translated_157_residues MGILRSTGVPRAVSQADQPLRRLDLSYLLWCLSLVGICGVQRIYNRRPLSGVLYLLSFGLLGIGTVVDLFLIPSLVRHAN APTLLDQARAAVEPIDRQLLLLARSKGSAGFSLNDAVLALDPAVELAELRRVLDDLQQHELLLISNDAQGRVVYREP >Mature_156_residues GILRSTGVPRAVSQADQPLRRLDLSYLLWCLSLVGICGVQRIYNRRPLSGVLYLLSFGLLGIGTVVDLFLIPSLVRHANA PTLLDQARAAVEPIDRQLLLLARSKGSAGFSLNDAVLALDPAVELAELRRVLDDLQQHELLLISNDAQGRVVYREP
Specific function: Unknown
COG id: COG2314
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17234; Mature: 17103
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILRSTGVPRAVSQADQPLRRLDLSYLLWCLSLVGICGVQRIYNRRPLSGVLYLLSFGL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LGIGTVVDLFLIPSLVRHANAPTLLDQARAAVEPIDRQLLLLARSKGSAGFSLNDAVLAL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE DPAVELAELRRVLDDLQQHELLLISNDAQGRVVYREP CCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECC >Mature Secondary Structure GILRSTGVPRAVSQADQPLRRLDLSYLLWCLSLVGICGVQRIYNRRPLSGVLYLLSFGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LGIGTVVDLFLIPSLVRHANAPTLLDQARAAVEPIDRQLLLLARSKGSAGFSLNDAVLAL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE DPAVELAELRRVLDDLQQHELLLISNDAQGRVVYREP CCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA