| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241971
Identifier: 148241971
GI number: 148241971
Start: 792375
End: 793046
Strand: Direct
Name: 148241971
Synonym: SynRCC307_0872
Alternate gene names: NA
Gene position: 792375-793046 (Clockwise)
Preceding gene: 148241967
Following gene: 148241975
Centisome position: 35.61
GC content: 63.54
Gene sequence:
>672_bases ATGGAGCTTTCCAGTCGTCAGGCGGACCTTGATGCCCTCGCGCGGCAGCAAATCCCTGGCTATTCGAGCCTGGCCAGGCT GTCAGTCTCGCTGTTGGCGGGCTATCCCTCGCTGCAGCCTTCGGGTTCCCAGGTGTTGGTGGTGGGATGCGGCACCGGCG CGGAGTTGCGTGAAGCCCAGGGCCTACGCCCGGATTGGGCCCTGACCGGGGTTGACCCTGCGGCCTCATTGCTCGATGAA GCCCGTCGCCGCCTGGGGGCTGCGGCTCAGCAGGTGCGCTGGGTGGACAGTCGCGTCGAAGATCTTCCTGGTGAGGCCAG TTATGGCGCTGCTATTGCTGTGTTGGTGCTGCAAGAGCTGCCCGACGATGGAGCCAAGCTGGCGTTTTTAAGCGCCTTGG CCCGTTTGCTGCAGCCCGGCGCTCCGCTGGTGTTGGTGGATGTGTTGGCGGGCTTTGGTGGCATGGCGAGCGGCACGACT CAGCAGTTTCAGGCTGCCCTGAAGCGATTTCAGGGTGATGCCAATACCCAAGCGGTGACACCAGCGACTCCGTTGCATCT CATTGGTGAAGCCCGCCGCTCTGCCCTGCTGGCAGCGGCTGGCTTTAGTGATCCTCTGCGCTTTTATCAGGCGCTTCAGG TGGAGGGAGTGGTGGTTCAGAAGCGGCCGTGA
Upstream 100 bases:
>100_bases GGCACGGCGGTCGGGGTTATGGGCGCCGACCAACTTAACCGCCTAACGGGTGGGAATTGCGGATTGGGGTCCGAAATGAT GTGCTGCCTAACATGAGTCC
Downstream 100 bases:
>100_bases TGCAGCGTTTGATGTGCTCAAACACCGGTAAGCCTTCACTCCAGCCCTGAATTTCCGTCATGCGGCCATCCAAGCCGCGG TGGGTGCGGAAGAACTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Type
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MELSSRQADLDALARQQIPGYSSLARLSVSLLAGYPSLQPSGSQVLVVGCGTGAELREAQGLRPDWALTGVDPAASLLDE ARRRLGAAAQQVRWVDSRVEDLPGEASYGAAIAVLVLQELPDDGAKLAFLSALARLLQPGAPLVLVDVLAGFGGMASGTT QQFQAALKRFQGDANTQAVTPATPLHLIGEARRSALLAAAGFSDPLRFYQALQVEGVVVQKRP
Sequences:
>Translated_223_residues MELSSRQADLDALARQQIPGYSSLARLSVSLLAGYPSLQPSGSQVLVVGCGTGAELREAQGLRPDWALTGVDPAASLLDE ARRRLGAAAQQVRWVDSRVEDLPGEASYGAAIAVLVLQELPDDGAKLAFLSALARLLQPGAPLVLVDVLAGFGGMASGTT QQFQAALKRFQGDANTQAVTPATPLHLIGEARRSALLAAAGFSDPLRFYQALQVEGVVVQKRP >Mature_223_residues MELSSRQADLDALARQQIPGYSSLARLSVSLLAGYPSLQPSGSQVLVVGCGTGAELREAQGLRPDWALTGVDPAASLLDE ARRRLGAAAQQVRWVDSRVEDLPGEASYGAAIAVLVLQELPDDGAKLAFLSALARLLQPGAPLVLVDVLAGFGGMASGTT QQFQAALKRFQGDANTQAVTPATPLHLIGEARRSALLAAAGFSDPLRFYQALQVEGVVVQKRP
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23368; Mature: 23368
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSSRQADLDALARQQIPGYSSLARLSVSLLAGYPSLQPSGSQVLVVGCGTGAELREAQ CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHC GLRPDWALTGVDPAASLLDEARRRLGAAAQQVRWVDSRVEDLPGEASYGAAIAVLVLQEL CCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC PDDGAKLAFLSALARLLQPGAPLVLVDVLAGFGGMASGTTQQFQAALKRFQGDANTQAVT CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEC PATPLHLIGEARRSALLAAAGFSDPLRFYQALQVEGVVVQKRP CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCC >Mature Secondary Structure MELSSRQADLDALARQQIPGYSSLARLSVSLLAGYPSLQPSGSQVLVVGCGTGAELREAQ CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHC GLRPDWALTGVDPAASLLDEARRRLGAAAQQVRWVDSRVEDLPGEASYGAAIAVLVLQEL CCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC PDDGAKLAFLSALARLLQPGAPLVLVDVLAGFGGMASGTTQQFQAALKRFQGDANTQAVT CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEC PATPLHLIGEARRSALLAAAGFSDPLRFYQALQVEGVVVQKRP CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA