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The map label for this gene is ydiS [C]

Identifier: 148241960

GI number: 148241960

Start: 781298

End: 782431

Strand: Direct

Name: ydiS [C]

Synonym: SynRCC307_0861

Alternate gene names: 148241960

Gene position: 781298-782431 (Clockwise)

Preceding gene: 148241959

Following gene: 148241961

Centisome position: 35.12

GC content: 63.93

Gene sequence:

>1134_bases
GTGAGTTTCGATGTTGCTGTGGTGGGTGCTGGTGCCGCCGGGGCGGCATCGGCCTACCAACTCGCCCTGCGTGGACGCTC
GGTTGTCTTGATCGATGAGCGCGCCTTGCCGCGCTCCAAACCCTGTGGCGGAGGCATGGCTGCCTCTGTTCAGCAATGGT
TTCCTTGCGACCTCACGCCGGCGGTGGATCGGGTGATTGATCGGGTGCGATTCACCTGGTGTTTGGAGGATCCGGTGATT
GCCGATCTTCCCGGTGAATCCCCGTTTTGGATCGTGCGCCGTGATGTGCTCGATGGCTACTTAGCTGATCAGGCTGCTGC
CGCTGGCGCGGAACGCTTGGAGGGCCAAGCTGTCACCGAAGTCAGCCGCCATGGCGATGGCTGGGAGCTGTGTATTGGCG
AGCAGCGCCTACAGGCCCGGGCGCTGGTGTTGGCCCATGGCTCCCGAGGTGATCTGGTGAACCAGTTGGGGGTGGCTGAT
CCCAAGCCCCGTTTGGCCGCGGCATTAGCCCTGGAGGTGGAGGGGCCGGTGGATGAACCGCAAACGGCTCGGTTCGAATT
TGGCTTGGTCAAACACGGCTTCTGCTGGTGCTTTCCCCGCAGTGGCGGCTACAGCGTTGGCATTGGCACGTTTCTGGGTC
GGACCGTGGCCGACTACGACCAGGTGCTCACCGCTTTGCTGCCCAGCCTGGGCCTGGATCCCCAGGCAGGGGAGCGCCGT
CATTGGCCGCTGCGGGTTTGGAATGGACACCACCCACTGCACCGCGATGGTGTCGTGGCGGTTGGCGATGCGGCCTCGCT
GGCGGATCCCTTCTTGGCGGAGGGGTTGCGCCCGGCTTTGCTCTCGGCCTTGCGCTCGGCGGAAGCTTTGGATGCTTATC
TCTCTGGAGATCAACAGGCCTTGGCTGGCTACACCCGCACCATGCGCCGCGAGTGGGGCGAATCGATGAGCTGGGGCCGC
CGCATTGGTCAAGTGTTTTATCGCTTCCCCAAGGTCGGCTACCAGCTGGGGATCAAACGGCCCACGGCGCCGCAGCGCAT
TGCTCAGATCTTGAGTGGTGAGATGGGTTATGGCGACATTGCTCAGCGGGTGATCCGCCGGTTGGGCGGCGGCTTGTTGG
GGGCGGGACGTTGA

Upstream 100 bases:

>100_bases
TCAGCCGTGATGAGCAGGACAAGGTTCAAAAGGTGACCGACAAGTTCATCGCCGATTTGGAGAAACTGCTGGCTGATAAA
GAAGCCGACATCCTCAAGGT

Downstream 100 bases:

>100_bases
TTCCGCTTCTTGCCCCTTGCCCATTGGAGGCTGGATGGGAGTTGATCTGGCAGCAGAGCTTGCCCAACCCAGCCGCTGAT
CAGCGCTTGGGTGGTTTCTC

Product: dehydrogenase

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSFDVAVVGAGAAGAASAYQLALRGRSVVLIDERALPRSKPCGGGMAASVQQWFPCDLTPAVDRVIDRVRFTWCLEDPVI
ADLPGESPFWIVRRDVLDGYLADQAAAAGAERLEGQAVTEVSRHGDGWELCIGEQRLQARALVLAHGSRGDLVNQLGVAD
PKPRLAAALALEVEGPVDEPQTARFEFGLVKHGFCWCFPRSGGYSVGIGTFLGRTVADYDQVLTALLPSLGLDPQAGERR
HWPLRVWNGHHPLHRDGVVAVGDAASLADPFLAEGLRPALLSALRSAEALDAYLSGDQQALAGYTRTMRREWGESMSWGR
RIGQVFYRFPKVGYQLGIKRPTAPQRIAQILSGEMGYGDIAQRVIRRLGGGLLGAGR

Sequences:

>Translated_377_residues
MSFDVAVVGAGAAGAASAYQLALRGRSVVLIDERALPRSKPCGGGMAASVQQWFPCDLTPAVDRVIDRVRFTWCLEDPVI
ADLPGESPFWIVRRDVLDGYLADQAAAAGAERLEGQAVTEVSRHGDGWELCIGEQRLQARALVLAHGSRGDLVNQLGVAD
PKPRLAAALALEVEGPVDEPQTARFEFGLVKHGFCWCFPRSGGYSVGIGTFLGRTVADYDQVLTALLPSLGLDPQAGERR
HWPLRVWNGHHPLHRDGVVAVGDAASLADPFLAEGLRPALLSALRSAEALDAYLSGDQQALAGYTRTMRREWGESMSWGR
RIGQVFYRFPKVGYQLGIKRPTAPQRIAQILSGEMGYGDIAQRVIRRLGGGLLGAGR
>Mature_376_residues
SFDVAVVGAGAAGAASAYQLALRGRSVVLIDERALPRSKPCGGGMAASVQQWFPCDLTPAVDRVIDRVRFTWCLEDPVIA
DLPGESPFWIVRRDVLDGYLADQAAAAGAERLEGQAVTEVSRHGDGWELCIGEQRLQARALVLAHGSRGDLVNQLGVADP
KPRLAAALALEVEGPVDEPQTARFEFGLVKHGFCWCFPRSGGYSVGIGTFLGRTVADYDQVLTALLPSLGLDPQAGERRH
WPLRVWNGHHPLHRDGVVAVGDAASLADPFLAEGLRPALLSALRSAEALDAYLSGDQQALAGYTRTMRREWGESMSWGRR
IGQVFYRFPKVGYQLGIKRPTAPQRIAQILSGEMGYGDIAQRVIRRLGGGLLGAGR

Specific function: Probably Accepts Electrons From Ydiq/Ydir And Reduces A Quinone. [C]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.5.5.- [C]

Molecular weight: Translated: 40672; Mature: 40541

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDVAVVGAGAAGAASAYQLALRGRSVVLIDERALPRSKPCGGGMAASVQQWFPCDLTP
CCCEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCH
AVDRVIDRVRFTWCLEDPVIADLPGESPFWIVRRDVLDGYLADQAAAAGAERLEGQAVTE
HHHHHHHHHHHEEEECCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHH
VSRHGDGWELCIGEQRLQARALVLAHGSRGDLVNQLGVADPKPRLAAALALEVEGPVDEP
HHHCCCCEEEEECHHHHHHEEEEEEECCCCCHHHHCCCCCCCCHHEEEEEEEECCCCCCC
QTARFEFGLVKHGFCWCFPRSGGYSVGIGTFLGRTVADYDQVLTALLPSLGLDPQAGERR
CCCEEEECCEECCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
HWPLRVWNGHHPLHRDGVVAVGDAASLADPFLAEGLRPALLSALRSAEALDAYLSGDQQA
CCCEEEECCCCCCCCCCEEEECCCHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHH
LAGYTRTMRREWGESMSWGRRIGQVFYRFPKVGYQLGIKRPTAPQRIAQILSGEMGYGDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCHHH
AQRVIRRLGGGLLGAGR
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SFDVAVVGAGAAGAASAYQLALRGRSVVLIDERALPRSKPCGGGMAASVQQWFPCDLTP
CCEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCH
AVDRVIDRVRFTWCLEDPVIADLPGESPFWIVRRDVLDGYLADQAAAAGAERLEGQAVTE
HHHHHHHHHHHEEEECCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHH
VSRHGDGWELCIGEQRLQARALVLAHGSRGDLVNQLGVADPKPRLAAALALEVEGPVDEP
HHHCCCCEEEEECHHHHHHEEEEEEECCCCCHHHHCCCCCCCCHHEEEEEEEECCCCCCC
QTARFEFGLVKHGFCWCFPRSGGYSVGIGTFLGRTVADYDQVLTALLPSLGLDPQAGERR
CCCEEEECCEECCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
HWPLRVWNGHHPLHRDGVVAVGDAASLADPFLAEGLRPALLSALRSAEALDAYLSGDQQA
CCCEEEECCCCCCCCCCEEEECCCHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHH
LAGYTRTMRREWGESMSWGRRIGQVFYRFPKVGYQLGIKRPTAPQRIAQILSGEMGYGDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCHHH
AQRVIRRLGGGLLGAGR
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9063468 [H]