| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241961
Identifier: 148241961
GI number: 148241961
Start: 782428
End: 783426
Strand: Direct
Name: 148241961
Synonym: SynRCC307_0862
Alternate gene names: NA
Gene position: 782428-783426 (Clockwise)
Preceding gene: 148241960
Following gene: 148241966
Centisome position: 35.17
GC content: 63.36
Gene sequence:
>999_bases TTGATTCCGCTTCTTGCCCCTTGCCCATTGGAGGCTGGATGGGAGTTGATCTGGCAGCAGAGCTTGCCCAACCCAGCCGC TGATCAGCGCTTGGGTGGTTTCTCTGGGATGGCGCTCGATTGGCCGCGGCGGCGCCTGTGGCTGCTTAGCGATGCCAAGC GCACCCACAGCCTTGAGCTGCGCTGGGATGGAACCGTGCGCCAGCCCTTGCTATCGGCGCAGGCTCCCCAGCCGTTGCAG GGGCAAGGCCGCCAGAAGTTGGATGGTGAAGCGCTGGTGCGCACACCCGGGGGTAGTCCGGAGCGGTTTTGGATGGCCAG TGAAGCCCGTAACCCCCAAAAGCGACCAGCCTCCCTGTTGGAGCTGAAGCTGCTCCGCTCCGGTGGCTTTGCCATCCAGC AGCAATGGCCGTTGCCCGCCGAGTGGCAACCACAGCAGGGTCAAGGCATGCGCCGCAACAAAGGGCCCGAGGCCCTGGTT GCCTTGCCGGCGCTGCGTTTTTTGCTCGCAGCGGAGGCTCCATTGCAACAGGATTCATCGCGCCAATTGCGCCTGCTGCT GGCTAAGCAGCAGGGCCAGCAGATGCAATTCACCCCCCTGGGAACACCGCTGCTGGTTAGTGCGCCTTTAGAAGCCCAGC CCCATTGGGGGCTCACCGCATTGCTGCCTGCTCAGGCTGGAGAGCAGCCACCACTACTAGCCCTATGGCGTGGGTACGCC GAGCCCAATAAATGGTGGAACCGGCTCAGCTTGCTGCCAGCGGTTCCTCTCGATCAGAAGCCAGAGCGGGCTGTGGCTCC CTTGATGCGCTGGGATCTGCGCGATGTTGGCTTAGAGCCCGACAACTGGGAGGCGTTAACCGCTGGACCGCAACTGGAGG ATGGACGTCCCACCCTGCTGCTAGCCAGCGATGACAATTTCAGCCCCTTCCAGCAGAACCGCTTGGCTCTGCTGGCACCC CTGCAAACTGAAGCCTGCGCCTCAGCGGACAGCCGCTAG
Upstream 100 bases:
>100_bases CGCAGCGCATTGCTCAGATCTTGAGTGGTGAGATGGGTTATGGCGACATTGCTCAGCGGGTGATCCGCCGGTTGGGCGGC GGCTTGTTGGGGGCGGGACG
Downstream 100 bases:
>100_bases GGCTGCGCCAAGACCGGCGCGCACATCTTCGGGATGGAGCTTGCCGTCGTGGTCGCGATCGAGGGCATCGAAGACGGCAT CGCTACCGAGCCATTCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MIPLLAPCPLEAGWELIWQQSLPNPAADQRLGGFSGMALDWPRRRLWLLSDAKRTHSLELRWDGTVRQPLLSAQAPQPLQ GQGRQKLDGEALVRTPGGSPERFWMASEARNPQKRPASLLELKLLRSGGFAIQQQWPLPAEWQPQQGQGMRRNKGPEALV ALPALRFLLAAEAPLQQDSSRQLRLLLAKQQGQQMQFTPLGTPLLVSAPLEAQPHWGLTALLPAQAGEQPPLLALWRGYA EPNKWWNRLSLLPAVPLDQKPERAVAPLMRWDLRDVGLEPDNWEALTAGPQLEDGRPTLLLASDDNFSPFQQNRLALLAP LQTEACASADSR
Sequences:
>Translated_332_residues MIPLLAPCPLEAGWELIWQQSLPNPAADQRLGGFSGMALDWPRRRLWLLSDAKRTHSLELRWDGTVRQPLLSAQAPQPLQ GQGRQKLDGEALVRTPGGSPERFWMASEARNPQKRPASLLELKLLRSGGFAIQQQWPLPAEWQPQQGQGMRRNKGPEALV ALPALRFLLAAEAPLQQDSSRQLRLLLAKQQGQQMQFTPLGTPLLVSAPLEAQPHWGLTALLPAQAGEQPPLLALWRGYA EPNKWWNRLSLLPAVPLDQKPERAVAPLMRWDLRDVGLEPDNWEALTAGPQLEDGRPTLLLASDDNFSPFQQNRLALLAP LQTEACASADSR >Mature_332_residues MIPLLAPCPLEAGWELIWQQSLPNPAADQRLGGFSGMALDWPRRRLWLLSDAKRTHSLELRWDGTVRQPLLSAQAPQPLQ GQGRQKLDGEALVRTPGGSPERFWMASEARNPQKRPASLLELKLLRSGGFAIQQQWPLPAEWQPQQGQGMRRNKGPEALV ALPALRFLLAAEAPLQQDSSRQLRLLLAKQQGQQMQFTPLGTPLLVSAPLEAQPHWGLTALLPAQAGEQPPLLALWRGYA EPNKWWNRLSLLPAVPLDQKPERAVAPLMRWDLRDVGLEPDNWEALTAGPQLEDGRPTLLLASDDNFSPFQQNRLALLAP LQTEACASADSR
Specific function: Unknown
COG id: COG4222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36930; Mature: 36930
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPLLAPCPLEAGWELIWQQSLPNPAADQRLGGFSGMALDWPRRRLWLLSDAKRTHSLEL CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCEECCCCCEEEEEECCCCCEEEEE RWDGTVRQPLLSAQAPQPLQGQGRQKLDGEALVRTPGGSPERFWMASEARNPQKRPASLL EECCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEHHHCCCCCCCCHHHH ELKLLRSGGFAIQQQWPLPAEWQPQQGQGMRRNKGPEALVALPALRFLLAAEAPLQQDSS HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC RQLRLLLAKQQGQQMQFTPLGTPLLVSAPLEAQPHWGLTALLPAQAGEQPPLLALWRGYA HHHHHHEEHHCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEHHHHCCC EPNKWWNRLSLLPAVPLDQKPERAVAPLMRWDLRDVGLEPDNWEALTAGPQLEDGRPTLL CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEE LASDDNFSPFQQNRLALLAPLQTEACASADSR EECCCCCCCHHHCCEEEEECCCHHHHHCCCCC >Mature Secondary Structure MIPLLAPCPLEAGWELIWQQSLPNPAADQRLGGFSGMALDWPRRRLWLLSDAKRTHSLEL CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCEECCCCCEEEEEECCCCCEEEEE RWDGTVRQPLLSAQAPQPLQGQGRQKLDGEALVRTPGGSPERFWMASEARNPQKRPASLL EECCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEHHHCCCCCCCCHHHH ELKLLRSGGFAIQQQWPLPAEWQPQQGQGMRRNKGPEALVALPALRFLLAAEAPLQQDSS HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC RQLRLLLAKQQGQQMQFTPLGTPLLVSAPLEAQPHWGLTALLPAQAGEQPPLLALWRGYA HHHHHHEEHHCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEHHHHCCC EPNKWWNRLSLLPAVPLDQKPERAVAPLMRWDLRDVGLEPDNWEALTAGPQLEDGRPTLL CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEE LASDDNFSPFQQNRLALLAPLQTEACASADSR EECCCCCCCHHHCCEEEEECCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA