Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is bioH [C]

Identifier: 148241935

GI number: 148241935

Start: 760867

End: 761562

Strand: Direct

Name: bioH [C]

Synonym: SynRCC307_0836

Alternate gene names: 148241935

Gene position: 760867-761562 (Clockwise)

Preceding gene: 148241933

Following gene: 148241938

Centisome position: 34.2

GC content: 64.22

Gene sequence:

>696_bases
ATGAGTGAGAGCACCAACTTACGAGAACCGCACGCCCAACTGGTGATGGCCCATGGTTGGCTGTTGCGTGGGCGCATTTG
GCAGCCCTTGCAGCAGCAGCTTGAGCCGCAGTGGTCCTGCTGGGCGCCTGATCTGCCGGGCTTTGGCTCCGCTCAACGCC
CCCCAGGCCTGAGCCCAACCCTGCCGGCCTACGGCCGTTGGCTGGCTCAAGAAGCCAAACAGCGTGCTGCCGGTGGCCCT
CTGGTGCTTCTCGGCCATTCGCTCGGCGGCAGTGTTGTGCTCCATGCCGCTGCCTTGCTGGGGGATCAACTCCAAGGGAT
CGTTTTGCTGGGCTGTGGCGGTGGGGTTTACCAACGCAGGCCTTTTGCGCGATTGCGCCAAGTCGGCTGTGCCCTGTCGT
GGTTCCAGGGCGATCGCCGTGCTGCCCGAGGCCTGCTGCTCAACAGCACCCAGCGCCGTGCGGTGGCTGGCTTGCCCAAG
TTGGTGTCGCAACTGGCCATGCCAAGCCTCTGGGTCGGTGGCGGCAACGATCAGGTCATGCAGCCTGTCTATGTGCGGCA
CTTGGCTGGCTATGCGCCGGATCATCAGATCGAGGTGCTTCCAGGCGCGGGGCACTTGCCCATGCGTGATCAACCGGTTG
CCTTGGCTGAGGTGCTGATTCCTTGGCTTCAGAGGCTGGCCAGTCCCCGCTCTTGA

Upstream 100 bases:

>100_bases
AATCTTTGCCGTAGAGCTGATCGAGCAGCGGCTCCGCCTGCCAGGCTGGATTGGCTGCCAGTGAGGAGGCCATGGGACCT
GGGCTGCCGGCCAGCACCGG

Downstream 100 bases:

>100_bases
AGTTCCGCTAGCTGGGCGTAGAGGCCCCCTTGGCGGCGCAGTTCCTGGTGGGTTCCCTCCTCCACGAGCCGGCCCCGCTT
GAGCACCAAAATGCGATCAC

Product: alpha/beta superfamily hydrolase/acyltransferase

Products: NA

Alternate protein names: Alpha/Beta Fold Family Hydrolase; Alpha/Beta Superfamily Hydrolase/Acyltransferase

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSESTNLREPHAQLVMAHGWLLRGRIWQPLQQQLEPQWSCWAPDLPGFGSAQRPPGLSPTLPAYGRWLAQEAKQRAAGGP
LVLLGHSLGGSVVLHAAALLGDQLQGIVLLGCGGGVYQRRPFARLRQVGCALSWFQGDRRAARGLLLNSTQRRAVAGLPK
LVSQLAMPSLWVGGGNDQVMQPVYVRHLAGYAPDHQIEVLPGAGHLPMRDQPVALAEVLIPWLQRLASPRS

Sequences:

>Translated_231_residues
MSESTNLREPHAQLVMAHGWLLRGRIWQPLQQQLEPQWSCWAPDLPGFGSAQRPPGLSPTLPAYGRWLAQEAKQRAAGGP
LVLLGHSLGGSVVLHAAALLGDQLQGIVLLGCGGGVYQRRPFARLRQVGCALSWFQGDRRAARGLLLNSTQRRAVAGLPK
LVSQLAMPSLWVGGGNDQVMQPVYVRHLAGYAPDHQIEVLPGAGHLPMRDQPVALAEVLIPWLQRLASPRS
>Mature_230_residues
SESTNLREPHAQLVMAHGWLLRGRIWQPLQQQLEPQWSCWAPDLPGFGSAQRPPGLSPTLPAYGRWLAQEAKQRAAGGPL
VLLGHSLGGSVVLHAAALLGDQLQGIVLLGCGGGVYQRRPFARLRQVGCALSWFQGDRRAARGLLLNSTQRRAVAGLPKL
VSQLAMPSLWVGGGNDQVMQPVYVRHLAGYAPDHQIEVLPGAGHLPMRDQPVALAEVLIPWLQRLASPRS

Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25057; Mature: 24926

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESTNLREPHAQLVMAHGWLLRGRIWQPLQQQLEPQWSCWAPDLPGFGSAQRPPGLSPT
CCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPAYGRWLAQEAKQRAAGGPLVLLGHSLGGSVVLHAAALLGDQLQGIVLLGCGGGVYQRR
CHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHCC
PFARLRQVGCALSWFQGDRRAARGLLLNSTQRRAVAGLPKLVSQLAMPSLWVGGGNDQVM
HHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCHHH
QPVYVRHLAGYAPDHQIEVLPGAGHLPMRDQPVALAEVLIPWLQRLASPRS
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SESTNLREPHAQLVMAHGWLLRGRIWQPLQQQLEPQWSCWAPDLPGFGSAQRPPGLSPT
CCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPAYGRWLAQEAKQRAAGGPLVLLGHSLGGSVVLHAAALLGDQLQGIVLLGCGGGVYQRR
CHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHCC
PFARLRQVGCALSWFQGDRRAARGLLLNSTQRRAVAGLPKLVSQLAMPSLWVGGGNDQVM
HHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCHHH
QPVYVRHLAGYAPDHQIEVLPGAGHLPMRDQPVALAEVLIPWLQRLASPRS
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA