| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is bioH [C]
Identifier: 148241935
GI number: 148241935
Start: 760867
End: 761562
Strand: Direct
Name: bioH [C]
Synonym: SynRCC307_0836
Alternate gene names: 148241935
Gene position: 760867-761562 (Clockwise)
Preceding gene: 148241933
Following gene: 148241938
Centisome position: 34.2
GC content: 64.22
Gene sequence:
>696_bases ATGAGTGAGAGCACCAACTTACGAGAACCGCACGCCCAACTGGTGATGGCCCATGGTTGGCTGTTGCGTGGGCGCATTTG GCAGCCCTTGCAGCAGCAGCTTGAGCCGCAGTGGTCCTGCTGGGCGCCTGATCTGCCGGGCTTTGGCTCCGCTCAACGCC CCCCAGGCCTGAGCCCAACCCTGCCGGCCTACGGCCGTTGGCTGGCTCAAGAAGCCAAACAGCGTGCTGCCGGTGGCCCT CTGGTGCTTCTCGGCCATTCGCTCGGCGGCAGTGTTGTGCTCCATGCCGCTGCCTTGCTGGGGGATCAACTCCAAGGGAT CGTTTTGCTGGGCTGTGGCGGTGGGGTTTACCAACGCAGGCCTTTTGCGCGATTGCGCCAAGTCGGCTGTGCCCTGTCGT GGTTCCAGGGCGATCGCCGTGCTGCCCGAGGCCTGCTGCTCAACAGCACCCAGCGCCGTGCGGTGGCTGGCTTGCCCAAG TTGGTGTCGCAACTGGCCATGCCAAGCCTCTGGGTCGGTGGCGGCAACGATCAGGTCATGCAGCCTGTCTATGTGCGGCA CTTGGCTGGCTATGCGCCGGATCATCAGATCGAGGTGCTTCCAGGCGCGGGGCACTTGCCCATGCGTGATCAACCGGTTG CCTTGGCTGAGGTGCTGATTCCTTGGCTTCAGAGGCTGGCCAGTCCCCGCTCTTGA
Upstream 100 bases:
>100_bases AATCTTTGCCGTAGAGCTGATCGAGCAGCGGCTCCGCCTGCCAGGCTGGATTGGCTGCCAGTGAGGAGGCCATGGGACCT GGGCTGCCGGCCAGCACCGG
Downstream 100 bases:
>100_bases AGTTCCGCTAGCTGGGCGTAGAGGCCCCCTTGGCGGCGCAGTTCCTGGTGGGTTCCCTCCTCCACGAGCCGGCCCCGCTT GAGCACCAAAATGCGATCAC
Product: alpha/beta superfamily hydrolase/acyltransferase
Products: NA
Alternate protein names: Alpha/Beta Fold Family Hydrolase; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSESTNLREPHAQLVMAHGWLLRGRIWQPLQQQLEPQWSCWAPDLPGFGSAQRPPGLSPTLPAYGRWLAQEAKQRAAGGP LVLLGHSLGGSVVLHAAALLGDQLQGIVLLGCGGGVYQRRPFARLRQVGCALSWFQGDRRAARGLLLNSTQRRAVAGLPK LVSQLAMPSLWVGGGNDQVMQPVYVRHLAGYAPDHQIEVLPGAGHLPMRDQPVALAEVLIPWLQRLASPRS
Sequences:
>Translated_231_residues MSESTNLREPHAQLVMAHGWLLRGRIWQPLQQQLEPQWSCWAPDLPGFGSAQRPPGLSPTLPAYGRWLAQEAKQRAAGGP LVLLGHSLGGSVVLHAAALLGDQLQGIVLLGCGGGVYQRRPFARLRQVGCALSWFQGDRRAARGLLLNSTQRRAVAGLPK LVSQLAMPSLWVGGGNDQVMQPVYVRHLAGYAPDHQIEVLPGAGHLPMRDQPVALAEVLIPWLQRLASPRS >Mature_230_residues SESTNLREPHAQLVMAHGWLLRGRIWQPLQQQLEPQWSCWAPDLPGFGSAQRPPGLSPTLPAYGRWLAQEAKQRAAGGPL VLLGHSLGGSVVLHAAALLGDQLQGIVLLGCGGGVYQRRPFARLRQVGCALSWFQGDRRAARGLLLNSTQRRAVAGLPKL VSQLAMPSLWVGGGNDQVMQPVYVRHLAGYAPDHQIEVLPGAGHLPMRDQPVALAEVLIPWLQRLASPRS
Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25057; Mature: 24926
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESTNLREPHAQLVMAHGWLLRGRIWQPLQQQLEPQWSCWAPDLPGFGSAQRPPGLSPT CCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC LPAYGRWLAQEAKQRAAGGPLVLLGHSLGGSVVLHAAALLGDQLQGIVLLGCGGGVYQRR CHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHCC PFARLRQVGCALSWFQGDRRAARGLLLNSTQRRAVAGLPKLVSQLAMPSLWVGGGNDQVM HHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCHHH QPVYVRHLAGYAPDHQIEVLPGAGHLPMRDQPVALAEVLIPWLQRLASPRS HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SESTNLREPHAQLVMAHGWLLRGRIWQPLQQQLEPQWSCWAPDLPGFGSAQRPPGLSPT CCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC LPAYGRWLAQEAKQRAAGGPLVLLGHSLGGSVVLHAAALLGDQLQGIVLLGCGGGVYQRR CHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHCC PFARLRQVGCALSWFQGDRRAARGLLLNSTQRRAVAGLPKLVSQLAMPSLWVGGGNDQVM HHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCHHH QPVYVRHLAGYAPDHQIEVLPGAGHLPMRDQPVALAEVLIPWLQRLASPRS HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA