| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241933
Identifier: 148241933
GI number: 148241933
Start: 759526
End: 760320
Strand: Direct
Name: 148241933
Synonym: SynRCC307_0834
Alternate gene names: NA
Gene position: 759526-760320 (Clockwise)
Preceding gene: 148241932
Following gene: 148241935
Centisome position: 34.14
GC content: 64.78
Gene sequence:
>795_bases GTGAGGTGTTGCAGCAAACTCTGCAGCGGGCGGCTGCGCTGCAATGGAGCCCCCAGTTGCTGCGCTGGCAAAGCGATCTC GATCGCATCGATGACATGGCGCCTTGGCATGGTGCGGCCTGATCCCAGCGATCGCTCCCAGTGGAGTGTGGTGATCCCGG TGCTCCAGGAGGCCCAGCAGCTGCCATCACTGCTGGCGCAATTGCAAGGGCCAGAGGAGGTGTGGGTGGTTGATGGTGGC AGCCGCGATGGCAGCGGTCAGATCGCCCGTTCGATGGGCGCCCATTGGCTGCGCTCAGCGGCGAGTCGCGGCGTGCAATT GCGTCTTGGTGCTGCCCAGGCCACACGCCCTTGGCTGTTGTTTTTGCATGCCGATGCCCGGTTGCCGAGCCACTGGTCCT CGGCTTTGGCACGGGTGTTGCATGATCCAGCCGTGGCTGCTGCCGCCTTTCGCCTCAGGGTGAATGGACGCGGTTGGAAG CTGCGCTTGCTGGAGCAGCTCGTGGATTGGCGCTGCCGTTGCCGTGGTTTGCCCTATGGCGATCAAGGGTTGGCGATGGC AGCCGATGTCTACCAGCGATCGGGTGGTTACCAACCGATTCCCCTGATGGAAGACCTTGAGTTGGTCCAGCGTCTGCATC GCCATGGCCGAGTTGTACAGGCGCCTGCCGCTGTGCAGGTCAGCGCGCGCCGCTGGCAACGGCTGGGGGTGTGGCGCAGC AGCTGGCGGAATGCGCAATTGCGCCGGGCTTGGCGCCAGGGGGTTCCGATCGACCAGTTGGCGGGCCGCTATTGA
Upstream 100 bases:
>100_bases GGCCCGGCCTGTGATGGTGGGTATTGGTTGGTGGGCTTAACAGCGGCAGGGCAACGTCAGCAGCGCGGCCGGTTGTTCAG TGGCATTGGCTGGGGCGGCA
Downstream 100 bases:
>100_bases TTAGCGGGCGTACCAGAACACGCAGCGCTCACCGCGGGGCTCCAGGTCCCAGCCCTGGGCTTTGTAGAAGCTCACCACGT TGGCATCGGCAAACAGGGTC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Cell Wall Biosynthesis Glycosyltransferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Cell Wall Biogenesis Glycosyltransferase; Glycosyl Transferase-Related Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferases Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MRCCSKLCSGRLRCNGAPSCCAGKAISIASMTWRLGMVRPDPSDRSQWSVVIPVLQEAQQLPSLLAQLQGPEEVWVVDGG SRDGSGQIARSMGAHWLRSAASRGVQLRLGAAQATRPWLLFLHADARLPSHWSSALARVLHDPAVAAAAFRLRVNGRGWK LRLLEQLVDWRCRCRGLPYGDQGLAMAADVYQRSGGYQPIPLMEDLELVQRLHRHGRVVQAPAAVQVSARRWQRLGVWRS SWRNAQLRRAWRQGVPIDQLAGRY
Sequences:
>Translated_264_residues MRCCSKLCSGRLRCNGAPSCCAGKAISIASMTWRLGMVRPDPSDRSQWSVVIPVLQEAQQLPSLLAQLQGPEEVWVVDGG SRDGSGQIARSMGAHWLRSAASRGVQLRLGAAQATRPWLLFLHADARLPSHWSSALARVLHDPAVAAAAFRLRVNGRGWK LRLLEQLVDWRCRCRGLPYGDQGLAMAADVYQRSGGYQPIPLMEDLELVQRLHRHGRVVQAPAAVQVSARRWQRLGVWRS SWRNAQLRRAWRQGVPIDQLAGRY >Mature_264_residues MRCCSKLCSGRLRCNGAPSCCAGKAISIASMTWRLGMVRPDPSDRSQWSVVIPVLQEAQQLPSLLAQLQGPEEVWVVDGG SRDGSGQIARSMGAHWLRSAASRGVQLRLGAAQATRPWLLFLHADARLPSHWSSALARVLHDPAVAAAAFRLRVNGRGWK LRLLEQLVDWRCRCRGLPYGDQGLAMAADVYQRSGGYQPIPLMEDLELVQRLHRHGRVVQAPAAVQVSARRWQRLGVWRS SWRNAQLRRAWRQGVPIDQLAGRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29422; Mature: 29422
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCCSKLCSGRLRCNGAPSCCAGKAISIASMTWRLGMVRPDPSDRSQWSVVIPVLQEAQQ CCHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCEEEEHHHHHHHHH LPSLLAQLQGPEEVWVVDGGSRDGSGQIARSMGAHWLRSAASRGVQLRLGAAQATRPWLL HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEE FLHADARLPSHWSSALARVLHDPAVAAAAFRLRVNGRGWKLRLLEQLVDWRCRCRGLPYG EEEECCCCCHHHHHHHHHHHHCHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC DQGLAMAADVYQRSGGYQPIPLMEDLELVQRLHRHGRVVQAPAAVQVSARRWQRLGVWRS CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHH SWRNAQLRRAWRQGVPIDQLAGRY HHCCHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure MRCCSKLCSGRLRCNGAPSCCAGKAISIASMTWRLGMVRPDPSDRSQWSVVIPVLQEAQQ CCHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCEEEEHHHHHHHHH LPSLLAQLQGPEEVWVVDGGSRDGSGQIARSMGAHWLRSAASRGVQLRLGAAQATRPWLL HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEE FLHADARLPSHWSSALARVLHDPAVAAAAFRLRVNGRGWKLRLLEQLVDWRCRCRGLPYG EEEECCCCCHHHHHHHHHHHHCHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC DQGLAMAADVYQRSGGYQPIPLMEDLELVQRLHRHGRVVQAPAAVQVSARRWQRLGVWRS CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHH SWRNAQLRRAWRQGVPIDQLAGRY HHCCHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA