| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241932
Identifier: 148241932
GI number: 148241932
Start: 759072
End: 759647
Strand: Direct
Name: 148241932
Synonym: SynRCC307_0833
Alternate gene names: NA
Gene position: 759072-759647 (Clockwise)
Preceding gene: 148241931
Following gene: 148241933
Centisome position: 34.12
GC content: 63.72
Gene sequence:
>576_bases TTGAGCCTTGCGCTGATTGTTTTAGCTCGTCAGCCCAGTCCAGGGCGCTGCAAGCGCCGCTTGGCGGCAACGATTGGCGA TCAATCAGCAGCGCGCATTCAGCAGCGCTTGCTGGCTCACACCGTGGCCGTTGCCCGCCAATGGCAACACACCCAAGCCG GCGCTGTGGTGAGCCTTTGCCTTGGGCATCACCAGGGATCTGGTGGCTTGGGGCTGCGCATGCAACGCCAGTTGGGACGC GCGGTGCGTGCCGGCGCCAGGGCGGCGGTGCTGGTTGGTTCCGATTTGCCAGGCTTGAGTGTTCAGCAGATTCAGCAGGC CTTCAGCGCTCTGCACCACGCTCCATTGGTTTTGGGCCCGGCCTGTGATGGTGGGTATTGGTTGGTGGGCTTAACAGCGG CAGGGCAACGTCAGCAGCGCGGCCGGTTGTTCAGTGGCATTGGCTGGGGCGGCAGTGAGGTGTTGCAGCAAACTCTGCAG CGGGCGGCTGCGCTGCAATGGAGCCCCCAGTTGCTGCGCTGGCAAAGCGATCTCGATCGCATCGATGACATGGCGCCTTG GCATGGTGCGGCCTGA
Upstream 100 bases:
>100_bases CCAAGGTGGGCGAGCCTTTGGCGGTGACGATTGAGCGTGATGGTGAGCCTCAGACCCTCGAGGTGAATCCCGCTGAGCTG CCCCAATCCCCGAAGCGCAA
Downstream 100 bases:
>100_bases TCCCAGCGATCGCTCCCAGTGGAGTGTGGTGATCCCGGTGCTCCAGGAGGCCCAGCAGCTGCCATCACTGCTGGCGCAAT TGCAAGGGCCAGAGGAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSLALIVLARQPSPGRCKRRLAATIGDQSAARIQQRLLAHTVAVARQWQHTQAGAVVSLCLGHHQGSGGLGLRMQRQLGR AVRAGARAAVLVGSDLPGLSVQQIQQAFSALHHAPLVLGPACDGGYWLVGLTAAGQRQQRGRLFSGIGWGGSEVLQQTLQ RAAALQWSPQLLRWQSDLDRIDDMAPWHGAA
Sequences:
>Translated_191_residues MSLALIVLARQPSPGRCKRRLAATIGDQSAARIQQRLLAHTVAVARQWQHTQAGAVVSLCLGHHQGSGGLGLRMQRQLGR AVRAGARAAVLVGSDLPGLSVQQIQQAFSALHHAPLVLGPACDGGYWLVGLTAAGQRQQRGRLFSGIGWGGSEVLQQTLQ RAAALQWSPQLLRWQSDLDRIDDMAPWHGAA >Mature_190_residues SLALIVLARQPSPGRCKRRLAATIGDQSAARIQQRLLAHTVAVARQWQHTQAGAVVSLCLGHHQGSGGLGLRMQRQLGRA VRAGARAAVLVGSDLPGLSVQQIQQAFSALHHAPLVLGPACDGGYWLVGLTAAGQRQQRGRLFSGIGWGGSEVLQQTLQR AAALQWSPQLLRWQSDLDRIDDMAPWHGAA
Specific function: Unknown
COG id: COG3222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20421; Mature: 20290
Theoretical pI: Translated: 12.09; Mature: 12.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLALIVLARQPSPGRCKRRLAATIGDQSAARIQQRLLAHTVAVARQWQHTQAGAVVSLC CCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGHHQGSGGLGLRMQRQLGRAVRAGARAAVLVGSDLPGLSVQQIQQAFSALHHAPLVLGP HHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEC ACDGGYWLVGLTAAGQRQQRGRLFSGIGWGGSEVLQQTLQRAAALQWSPQLLRWQSDLDR CCCCCEEEEEEECCCCHHHCCCCHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IDDMAPWHGAA HHHCCCCCCCC >Mature Secondary Structure SLALIVLARQPSPGRCKRRLAATIGDQSAARIQQRLLAHTVAVARQWQHTQAGAVVSLC CEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGHHQGSGGLGLRMQRQLGRAVRAGARAAVLVGSDLPGLSVQQIQQAFSALHHAPLVLGP HHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEC ACDGGYWLVGLTAAGQRQQRGRLFSGIGWGGSEVLQQTLQRAAALQWSPQLLRWQSDLDR CCCCCEEEEEEECCCCHHHCCCCHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IDDMAPWHGAA HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA