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The map label for this gene is csoS1/ccmK2 [H]

Identifier: 148241924

GI number: 148241924

Start: 750700

End: 751209

Strand: Direct

Name: csoS1/ccmK2 [H]

Synonym: SynRCC307_0825

Alternate gene names: 148241924

Gene position: 750700-751209 (Clockwise)

Preceding gene: 148241923

Following gene: 148241925

Centisome position: 33.74

GC content: 65.88

Gene sequence:

>510_bases
ATGGCCACTCCGACTCCCCGTAAACCCTCTAGCGGTAGCAGCTCACCTCGGGCTCAAAGTGCAGCCCCTGGCGCCAATCA
GCCCGCCAAGGCTCTGCCCCCTGCAGAAGCCACCACTCAAAAGGCAGCGGCTAAGCCGGCGGCCACAGCCAAGCCCAGGA
CCACCCCAGCCCGGAAGCCTCCAGCGCGTCAGAGCGCAGCAGCCACAGTCGATCGGGTGCAGGGGATTGCCCTGGGGATG
ATTGAGACCCGCGGTCTGGTGCCTGCGATCGAGGCGGCTGATGCCATGACCAAGGCCGCTGAAGTGATGATGATTGCTCG
GGAGTTTGTGGGCGGCGGTTACGTCACCGTGATGGTGCGCGGCGAGACCGGTGCAGTGAATGCGGCGGTGCGTGCTGGCG
CCGATGCCTGTGAGCGGGTTGGTGATGGCCTGGTGGCCGCCCACATCATTGCCCGCCCCCATGGGGAGGTTGAGCCTGCC
TTAACCGCGAGCGGACAACGCCGTAGTTGA

Upstream 100 bases:

>100_bases
CCGATCTCACCATCGGCGGAATCATTGATTTCTGGGCTCCCGACGGCTGACCCGGATCTCAACCCTCCCCTCTTGATCCC
CTCGACACCTCCAGCACCCC

Downstream 100 bases:

>100_bases
TCCTGATGGCGCGCCAGCTCCACCACCGTGTTCTGGCGGCTTTGGGTCAGGCGTTAAGCCTGGAACTCACAGCCGTTCAG
CAGTATCTGACCCATGCCGC

Product: carboxysome shell peptide, CsoS1

Products: NA

Alternate protein names: Carboxysome shell protein CsoS1 [H]

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MATPTPRKPSSGSSSPRAQSAAPGANQPAKALPPAEATTQKAAAKPAATAKPRTTPARKPPARQSAAATVDRVQGIALGM
IETRGLVPAIEAADAMTKAAEVMMIAREFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLVAAHIIARPHGEVEPA
LTASGQRRS

Sequences:

>Translated_169_residues
MATPTPRKPSSGSSSPRAQSAAPGANQPAKALPPAEATTQKAAAKPAATAKPRTTPARKPPARQSAAATVDRVQGIALGM
IETRGLVPAIEAADAMTKAAEVMMIAREFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLVAAHIIARPHGEVEPA
LTASGQRRS
>Mature_168_residues
ATPTPRKPSSGSSSPRAQSAAPGANQPAKALPPAEATTQKAAAKPAATAKPRTTPARKPPARQSAAATVDRVQGIALGMI
ETRGLVPAIEAADAMTKAAEVMMIAREFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLVAAHIIARPHGEVEPAL
TASGQRRS

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=85, Percent_Identity=55.2941176470588, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 17010; Mature: 16878

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPTPRKPSSGSSSPRAQSAAPGANQPAKALPPAEATTQKAAAKPAATAKPRTTPARKP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
PARQSAAATVDRVQGIALGMIETRGLVPAIEAADAMTKAAEVMMIAREFVGGGYVTVMVR
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
GETGAVNAAVRAGADACERVGDGLVAAHIIARPHGEVEPALTASGQRRS
CCCCCCHHHHHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATPTPRKPSSGSSSPRAQSAAPGANQPAKALPPAEATTQKAAAKPAATAKPRTTPARKP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
PARQSAAATVDRVQGIALGMIETRGLVPAIEAADAMTKAAEVMMIAREFVGGGYVTVMVR
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
GETGAVNAAVRAGADACERVGDGLVAAHIIARPHGEVEPALTASGQRRS
CCCCCCHHHHHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917486 [H]