| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is bfr [H]
Identifier: 148241925
GI number: 148241925
Start: 751206
End: 751706
Strand: Direct
Name: bfr [H]
Synonym: SynRCC307_0826
Alternate gene names: 148241925
Gene position: 751206-751706 (Clockwise)
Preceding gene: 148241924
Following gene: 148241926
Centisome position: 33.76
GC content: 62.08
Gene sequence:
>501_bases TTGATCCTGATGGCGCGCCAGCTCCACCACCGTGTTCTGGCGGCTTTGGGTCAGGCGTTAAGCCTGGAACTCACAGCCGT TCAGCAGTATCTGACCCATGCCGCTTTGCTGGAGGCCTGGGGAGATCCGCTGACGGCCGATCGTTTTCGCCAAGAAACGG TGGAGGAGATGCGCCACAGCGAGCGCATCATCCAGCGGATGGTGAGCCTGGGCCTGGCCCCGGCGGCGTCCCAGCTGCAG CCAGTAGCAACGGCTACCGATCTGCGCGGTCTGCTGGAGGTAAACACCCTCCTCGAAGATCAATTGGTGCGCCATTACGC CGAGGCCCAGCGCTTCTGCCAGTTGGTTGGTGATGCCGAGCAGGCTGCTTTTTTCTCTGAGCTGCTGGGCGAAGAAACCG CACACGCCCAGGCTCTTGCCCAATGGTTGCGGGAGCTAAACGGTCCCGGCGTTAACTCGATACATTCTCCTGACTTGCGA CCCCCAGCCCGCGCCGCTTGA
Upstream 100 bases:
>100_bases CCTGTGAGCGGGTTGGTGATGGCCTGGTGGCCGCCCACATCATTGCCCGCCCCCATGGGGAGGTTGAGCCTGCCTTAACC GCGAGCGGACAACGCCGTAG
Downstream 100 bases:
>100_bases ACGCCCATCTCCCACTGTCCATCCAGCTCTCATGGCTGATTCCGTTGTACGGATTCAGCGGAGTTCTCCTGTCGCTGCCC TGGGCGACCGGTTGGGTGAA
Product: bacterioferritin
Products: NA
Alternate protein names: BFR [H]
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MILMARQLHHRVLAALGQALSLELTAVQQYLTHAALLEAWGDPLTADRFRQETVEEMRHSERIIQRMVSLGLAPAASQLQ PVATATDLRGLLEVNTLLEDQLVRHYAEAQRFCQLVGDAEQAAFFSELLGEETAHAQALAQWLRELNGPGVNSIHSPDLR PPARAA
Sequences:
>Translated_166_residues MILMARQLHHRVLAALGQALSLELTAVQQYLTHAALLEAWGDPLTADRFRQETVEEMRHSERIIQRMVSLGLAPAASQLQ PVATATDLRGLLEVNTLLEDQLVRHYAEAQRFCQLVGDAEQAAFFSELLGEETAHAQALAQWLRELNGPGVNSIHSPDLR PPARAA >Mature_166_residues MILMARQLHHRVLAALGQALSLELTAVQQYLTHAALLEAWGDPLTADRFRQETVEEMRHSERIIQRMVSLGLAPAASQLQ PVATATDLRGLLEVNTLLEDQLVRHYAEAQRFCQLVGDAEQAAFFSELLGEETAHAQALAQWLRELNGPGVNSIHSPDLR PPARAA
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
None
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18361; Mature: 18361
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILMARQLHHRVLAALGQALSLELTAVQQYLTHAALLEAWGDPLTADRFRQETVEEMRHS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ERIIQRMVSLGLAPAASQLQPVATATDLRGLLEVNTLLEDQLVRHYAEAQRFCQLVGDAE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QAAFFSELLGEETAHAQALAQWLRELNGPGVNSIHSPDLRPPARAA HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MILMARQLHHRVLAALGQALSLELTAVQQYLTHAALLEAWGDPLTADRFRQETVEEMRHS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ERIIQRMVSLGLAPAASQLQPVATATDLRGLLEVNTLLEDQLVRHYAEAQRFCQLVGDAE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QAAFFSELLGEETAHAQALAQWLRELNGPGVNSIHSPDLRPPARAA HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7698330; 11756688 [H]