| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is cdsA [H]
Identifier: 148241883
GI number: 148241883
Start: 714388
End: 715224
Strand: Direct
Name: cdsA [H]
Synonym: SynRCC307_0784
Alternate gene names: 148241883
Gene position: 714388-715224 (Clockwise)
Preceding gene: 148241882
Following gene: 148241889
Centisome position: 32.11
GC content: 61.41
Gene sequence:
>837_bases ATGAGGGGCTCGAGCCGTTGGTTGAGCGGTCTGGCGGCGGCAGCCTTTGGTCTCTTGATCGTTGGGTTGGGGGGCTGGTG GTTCACCCTCAGCCTCGGTGTGATCGTGCATCTGGCCTTGCTGGAATTTTTCCGGCTGGCCCAGTTCAAGGGCATTCGTC CAGCCAGCAAAACCACCTTGGTGGCCTGTCAGTTGCTGTTGATCATTACCCAGTTGGCCCCGGGAAGTCCCTGGGCGGCA GCGGTCCTGCCAGTGGCGGGCTCGGTGATCTGTGGCTGGCTGCTGCTGCAGCCGGTCACCGGCACGATCGCCGATATTGC GGCGTCGATTTTTGGCCTCTTTTATTTGGGCTTTTTGCCCAGCCATTGGGTGCGCTTACGCGATCTCAGTGACGCTTGGG CGGCGCCCCATTGGCCTCTGCATCCGGGACTGTCGATCACGCTGTTGGCGTTTGTGCTGATTTGGGCGGCTGATTGCGGG TCCTATTTGTGGGGCAGCCGTTTTGGCCGCACGCGCCTCTCGGAGGTGTCACCGGGCAAGACAGTGGAAGGGGCTTTGGC GGGCTTGTTCGCCACGGTGATCACGGGCGCTGTGGGGGGCTGGTTGTTGGGTTGGCCGTTGGGGCTTTTGCTCGGTGCTG GGCTGGGGGGCTTGGTAGCGCTGTTTGCCCTGGTGGGTGATCTCACCGAATCGATGATGAAACGCGATGCCGGTGTGAAG GACTCAGGCGCGTTGATTCCAGGCCATGGCGGCATTCTCGATCGGGTCGATAGTTATTTGTTCACCCCTGCGGTGGTGTT TTACGCCGTCACTTTGGTCTTGCCGCTGGTGGGCTAG
Upstream 100 bases:
>100_bases AGGTGTCTCAAGCCACTGTTCATCGCATGGTGCGGCGCAGTAATCAAACGCGCTTGGCCGCGGCGGAACCTCTGTTCGTG ATTGCGGCCGAACGTCACCC
Downstream 100 bases:
>100_bases GCAGCCGCTTCGGGGCTCACCACTGACTGCCCTCGCAGCGTCAGCTGAGCCGCTTGCAGCTCTAGCTGCTCCAGGGTGAT AGCGGGATCCATTGGCACGA
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MRGSSRWLSGLAAAAFGLLIVGLGGWWFTLSLGVIVHLALLEFFRLAQFKGIRPASKTTLVACQLLLIITQLAPGSPWAA AVLPVAGSVICGWLLLQPVTGTIADIAASIFGLFYLGFLPSHWVRLRDLSDAWAAPHWPLHPGLSITLLAFVLIWAADCG SYLWGSRFGRTRLSEVSPGKTVEGALAGLFATVITGAVGGWLLGWPLGLLLGAGLGGLVALFALVGDLTESMMKRDAGVK DSGALIPGHGGILDRVDSYLFTPAVVFYAVTLVLPLVG
Sequences:
>Translated_278_residues MRGSSRWLSGLAAAAFGLLIVGLGGWWFTLSLGVIVHLALLEFFRLAQFKGIRPASKTTLVACQLLLIITQLAPGSPWAA AVLPVAGSVICGWLLLQPVTGTIADIAASIFGLFYLGFLPSHWVRLRDLSDAWAAPHWPLHPGLSITLLAFVLIWAADCG SYLWGSRFGRTRLSEVSPGKTVEGALAGLFATVITGAVGGWLLGWPLGLLLGAGLGGLVALFALVGDLTESMMKRDAGVK DSGALIPGHGGILDRVDSYLFTPAVVFYAVTLVLPLVG >Mature_278_residues MRGSSRWLSGLAAAAFGLLIVGLGGWWFTLSLGVIVHLALLEFFRLAQFKGIRPASKTTLVACQLLLIITQLAPGSPWAA AVLPVAGSVICGWLLLQPVTGTIADIAASIFGLFYLGFLPSHWVRLRDLSDAWAAPHWPLHPGLSITLLAFVLIWAADCG SYLWGSRFGRTRLSEVSPGKTVEGALAGLFATVITGAVGGWLLGWPLGLLLGAGLGGLVALFALVGDLTESMMKRDAGVK DSGALIPGHGGILDRVDSYLFTPAVVFYAVTLVLPLVG
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=131, Percent_Identity=49.618320610687, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787677, Length=116, Percent_Identity=45.6896551724138, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 29213; Mature: 29213
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSSRWLSGLAAAAFGLLIVGLGGWWFTLSLGVIVHLALLEFFRLAQFKGIRPASKTTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VACQLLLIITQLAPGSPWAAAVLPVAGSVICGWLLLQPVTGTIADIAASIFGLFYLGFLP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHWVRLRDLSDAWAAPHWPLHPGLSITLLAFVLIWAADCGSYLWGSRFGRTRLSEVSPGK HHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC TVEGALAGLFATVITGAVGGWLLGWPLGLLLGAGLGGLVALFALVGDLTESMMKRDAGVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC DSGALIPGHGGILDRVDSYLFTPAVVFYAVTLVLPLVG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRGSSRWLSGLAAAAFGLLIVGLGGWWFTLSLGVIVHLALLEFFRLAQFKGIRPASKTTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VACQLLLIITQLAPGSPWAAAVLPVAGSVICGWLLLQPVTGTIADIAASIFGLFYLGFLP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHWVRLRDLSDAWAAPHWPLHPGLSITLLAFVLIWAADCGSYLWGSRFGRTRLSEVSPGK HHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC TVEGALAGLFATVITGAVGGWLLGWPLGLLLGAGLGGLVALFALVGDLTESMMKRDAGVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC DSGALIPGHGGILDRVDSYLFTPAVVFYAVTLVLPLVG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]