Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is cdsA [H]

Identifier: 148241883

GI number: 148241883

Start: 714388

End: 715224

Strand: Direct

Name: cdsA [H]

Synonym: SynRCC307_0784

Alternate gene names: 148241883

Gene position: 714388-715224 (Clockwise)

Preceding gene: 148241882

Following gene: 148241889

Centisome position: 32.11

GC content: 61.41

Gene sequence:

>837_bases
ATGAGGGGCTCGAGCCGTTGGTTGAGCGGTCTGGCGGCGGCAGCCTTTGGTCTCTTGATCGTTGGGTTGGGGGGCTGGTG
GTTCACCCTCAGCCTCGGTGTGATCGTGCATCTGGCCTTGCTGGAATTTTTCCGGCTGGCCCAGTTCAAGGGCATTCGTC
CAGCCAGCAAAACCACCTTGGTGGCCTGTCAGTTGCTGTTGATCATTACCCAGTTGGCCCCGGGAAGTCCCTGGGCGGCA
GCGGTCCTGCCAGTGGCGGGCTCGGTGATCTGTGGCTGGCTGCTGCTGCAGCCGGTCACCGGCACGATCGCCGATATTGC
GGCGTCGATTTTTGGCCTCTTTTATTTGGGCTTTTTGCCCAGCCATTGGGTGCGCTTACGCGATCTCAGTGACGCTTGGG
CGGCGCCCCATTGGCCTCTGCATCCGGGACTGTCGATCACGCTGTTGGCGTTTGTGCTGATTTGGGCGGCTGATTGCGGG
TCCTATTTGTGGGGCAGCCGTTTTGGCCGCACGCGCCTCTCGGAGGTGTCACCGGGCAAGACAGTGGAAGGGGCTTTGGC
GGGCTTGTTCGCCACGGTGATCACGGGCGCTGTGGGGGGCTGGTTGTTGGGTTGGCCGTTGGGGCTTTTGCTCGGTGCTG
GGCTGGGGGGCTTGGTAGCGCTGTTTGCCCTGGTGGGTGATCTCACCGAATCGATGATGAAACGCGATGCCGGTGTGAAG
GACTCAGGCGCGTTGATTCCAGGCCATGGCGGCATTCTCGATCGGGTCGATAGTTATTTGTTCACCCCTGCGGTGGTGTT
TTACGCCGTCACTTTGGTCTTGCCGCTGGTGGGCTAG

Upstream 100 bases:

>100_bases
AGGTGTCTCAAGCCACTGTTCATCGCATGGTGCGGCGCAGTAATCAAACGCGCTTGGCCGCGGCGGAACCTCTGTTCGTG
ATTGCGGCCGAACGTCACCC

Downstream 100 bases:

>100_bases
GCAGCCGCTTCGGGGCTCACCACTGACTGCCCTCGCAGCGTCAGCTGAGCCGCTTGCAGCTCTAGCTGCTCCAGGGTGAT
AGCGGGATCCATTGGCACGA

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MRGSSRWLSGLAAAAFGLLIVGLGGWWFTLSLGVIVHLALLEFFRLAQFKGIRPASKTTLVACQLLLIITQLAPGSPWAA
AVLPVAGSVICGWLLLQPVTGTIADIAASIFGLFYLGFLPSHWVRLRDLSDAWAAPHWPLHPGLSITLLAFVLIWAADCG
SYLWGSRFGRTRLSEVSPGKTVEGALAGLFATVITGAVGGWLLGWPLGLLLGAGLGGLVALFALVGDLTESMMKRDAGVK
DSGALIPGHGGILDRVDSYLFTPAVVFYAVTLVLPLVG

Sequences:

>Translated_278_residues
MRGSSRWLSGLAAAAFGLLIVGLGGWWFTLSLGVIVHLALLEFFRLAQFKGIRPASKTTLVACQLLLIITQLAPGSPWAA
AVLPVAGSVICGWLLLQPVTGTIADIAASIFGLFYLGFLPSHWVRLRDLSDAWAAPHWPLHPGLSITLLAFVLIWAADCG
SYLWGSRFGRTRLSEVSPGKTVEGALAGLFATVITGAVGGWLLGWPLGLLLGAGLGGLVALFALVGDLTESMMKRDAGVK
DSGALIPGHGGILDRVDSYLFTPAVVFYAVTLVLPLVG
>Mature_278_residues
MRGSSRWLSGLAAAAFGLLIVGLGGWWFTLSLGVIVHLALLEFFRLAQFKGIRPASKTTLVACQLLLIITQLAPGSPWAA
AVLPVAGSVICGWLLLQPVTGTIADIAASIFGLFYLGFLPSHWVRLRDLSDAWAAPHWPLHPGLSITLLAFVLIWAADCG
SYLWGSRFGRTRLSEVSPGKTVEGALAGLFATVITGAVGGWLLGWPLGLLLGAGLGGLVALFALVGDLTESMMKRDAGVK
DSGALIPGHGGILDRVDSYLFTPAVVFYAVTLVLPLVG

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=131, Percent_Identity=49.618320610687, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787677, Length=116, Percent_Identity=45.6896551724138, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 29213; Mature: 29213

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSSRWLSGLAAAAFGLLIVGLGGWWFTLSLGVIVHLALLEFFRLAQFKGIRPASKTTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
VACQLLLIITQLAPGSPWAAAVLPVAGSVICGWLLLQPVTGTIADIAASIFGLFYLGFLP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHWVRLRDLSDAWAAPHWPLHPGLSITLLAFVLIWAADCGSYLWGSRFGRTRLSEVSPGK
HHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC
TVEGALAGLFATVITGAVGGWLLGWPLGLLLGAGLGGLVALFALVGDLTESMMKRDAGVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
DSGALIPGHGGILDRVDSYLFTPAVVFYAVTLVLPLVG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRGSSRWLSGLAAAAFGLLIVGLGGWWFTLSLGVIVHLALLEFFRLAQFKGIRPASKTTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
VACQLLLIITQLAPGSPWAAAVLPVAGSVICGWLLLQPVTGTIADIAASIFGLFYLGFLP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHWVRLRDLSDAWAAPHWPLHPGLSITLLAFVLIWAADCGSYLWGSRFGRTRLSEVSPGK
HHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC
TVEGALAGLFATVITGAVGGWLLGWPLGLLLGAGLGGLVALFALVGDLTESMMKRDAGVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
DSGALIPGHGGILDRVDSYLFTPAVVFYAVTLVLPLVG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]