| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241863
Identifier: 148241863
GI number: 148241863
Start: 693551
End: 694108
Strand: Direct
Name: 148241863
Synonym: SynRCC307_0764
Alternate gene names: NA
Gene position: 693551-694108 (Clockwise)
Preceding gene: 148241862
Following gene: 148241864
Centisome position: 31.17
GC content: 59.32
Gene sequence:
>558_bases GTGGAACCCGTCTCCCTGTTTCGAGCCAAGCCGACCGTTGAGCCGCAGCAGCGGCTGCAATTTGATACGTCGCTGCGGCG TTGGTTTAATCGCAATTTGGGGTTGTGGCGCTCCCGCCGGCAGTACTTTTTTGCCGACGATCAGGCCTTGCGGGTCGACA TGTTCTTACGCATGGAGGCGTTCAGTGAGCCGGTTGAGGGAGAGGCGGCCTATCGCTTCACCTGGTGGCCCGAGAAGGAA TACGACTTTTTCGACAAGAACCCGCGCTACGTGCGGGAAGGAACCCTGGAGGCCTATCTGTGCGGCCATCAGCTGCGCCG TAGCCGCGGCTATCTCTGCGGCTCACCCACCAAGAGCCAGATTCGCCAGGTGGATGAGCATGAGTTGGTGTTTGAGTCCC ATTACCTGGAGTGGGACATCCTTGAGCACATCCGCTTGGTGGACATGGACCGCTACCGGGCCCGCTCGATTTATTCCTGG TGCAATGGGGAGTTGGTGCTGGCCGAAGTGCACCACGAAGAGCGTCTGGAATCCTCAGGCCAACCGTTGACATCCTGA
Upstream 100 bases:
>100_bases TGGTGTTGTGGTGCTACGCCGCAGTTGAAGATCATCTGCAGCTTGGGGATGTTTTTCTTTGCCCCTGGCTAAGACGAAAT TGAGAGATCGTCCCTGATCA
Downstream 100 bases:
>100_bases TTCGATCTCGTTGCCGCCGGCTGTGGGACGGGCTAGACAGCCTGGAGCCGATCTGCTCCTCGATGACATCAGCAGCGAAG CCCATCCAGGAGCCTGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MEPVSLFRAKPTVEPQQRLQFDTSLRRWFNRNLGLWRSRRQYFFADDQALRVDMFLRMEAFSEPVEGEAAYRFTWWPEKE YDFFDKNPRYVREGTLEAYLCGHQLRRSRGYLCGSPTKSQIRQVDEHELVFESHYLEWDILEHIRLVDMDRYRARSIYSW CNGELVLAEVHHEERLESSGQPLTS
Sequences:
>Translated_185_residues MEPVSLFRAKPTVEPQQRLQFDTSLRRWFNRNLGLWRSRRQYFFADDQALRVDMFLRMEAFSEPVEGEAAYRFTWWPEKE YDFFDKNPRYVREGTLEAYLCGHQLRRSRGYLCGSPTKSQIRQVDEHELVFESHYLEWDILEHIRLVDMDRYRARSIYSW CNGELVLAEVHHEERLESSGQPLTS >Mature_185_residues MEPVSLFRAKPTVEPQQRLQFDTSLRRWFNRNLGLWRSRRQYFFADDQALRVDMFLRMEAFSEPVEGEAAYRFTWWPEKE YDFFDKNPRYVREGTLEAYLCGHQLRRSRGYLCGSPTKSQIRQVDEHELVFESHYLEWDILEHIRLVDMDRYRARSIYSW CNGELVLAEVHHEERLESSGQPLTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22377; Mature: 22377
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPVSLFRAKPTVEPQQRLQFDTSLRRWFNRNLGLWRSRRQYFFADDQALRVDMFLRMEA CCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEECCCEEEHHHHHHHHH FSEPVEGEAAYRFTWWPEKEYDFFDKNPRYVREGTLEAYLCGHQLRRSRGYLCGSPTKSQ HCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCHHH IRQVDEHELVFESHYLEWDILEHIRLVDMDRYRARSIYSWCNGELVLAEVHHEERLESSG HHHCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHCC QPLTS CCCCC >Mature Secondary Structure MEPVSLFRAKPTVEPQQRLQFDTSLRRWFNRNLGLWRSRRQYFFADDQALRVDMFLRMEA CCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEECCCEEEHHHHHHHHH FSEPVEGEAAYRFTWWPEKEYDFFDKNPRYVREGTLEAYLCGHQLRRSRGYLCGSPTKSQ HCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCHHH IRQVDEHELVFESHYLEWDILEHIRLVDMDRYRARSIYSWCNGELVLAEVHHEERLESSG HHHCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHCC QPLTS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA