| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241862
Identifier: 148241862
GI number: 148241862
Start: 691901
End: 693478
Strand: Direct
Name: 148241862
Synonym: SynRCC307_0763
Alternate gene names: NA
Gene position: 691901-693478 (Clockwise)
Preceding gene: 148241860
Following gene: 148241863
Centisome position: 31.1
GC content: 61.28
Gene sequence:
>1578_bases TTGAGGTTTCTTGATTTGCTCAGCAAAAAACGACAAACCGCAGTAAATGACCCCGCCCGTTGGGTTTGGTGGGCGGCTGG CCTGTTCCTGCTGCTGGGTCTGCTGGTGCAGTTTTGGCGGCTTTGGTCGCTGTCGGCTACTTACGACCAAGGCATCTTCA ACCAGGTGCTCTGGAACAGCGGCCACGGCCGCTGGTTTGCCAGCAGCCTCTCCTCCCAGCTTTCCAGTGCTGTGTTGCAT GGGGGATTGGCGCCTGATCCCAGTTATCAGCGCCTCGGCCAGCACTACACGCCATTGCTGCTTCTCTGGGCACCGCTGGT GCGGTGGTTGGGCTTCGCTGCCTTGCCCCTCGTGCAAGTGAGCCTGATGACGGCGGCCGGTTTGGTGTTGCACCGCCTGG CTCGGGGGTTGCTTCCAGCTGGGCTAGCTGCAGCTGTGGCCTGCAGTTTTTATTGCGCCCAGGCAGTGATTGGCCCCACC TGGTGCAACTTCCACGATCTCTGCCAGCTGCCGCTGCTGGTGTTTCTGCTGCTCTTGGGGCTGCTGGAGCGGCGTTGGTG GTTGCTGCTGTTGGCGGCGCTGTTGATTCCGTTGGTGCGTGAGGACACCGGTGTTGTTCTCTTTGGCATGGCCCTGTGGA TGGGCCTGCGGCGCAAGGCCCCCTGGTGGGTGGCTGCGTTAATCGGCCTTTGGGGCGCTGCCTGGTGCGTTGTGGTCACC TCGGTGTTGATGCCTGCGGTGAGCGCCGATGTCAGCAAGCGCTTCATGGTGGAGAACTTTGGTCAGTACACCCCCGATGC TGAAGAGCTCAGCAGTTTGGAGGTGCTCAAGGGTTTGCTGCTCCAGCCGTGGCGCCTGCTCTGGGAGCTGATTAATCCCC CCGGAAAAACCCTGGCCTATCTGGCAGCGCAGTGGTTGCCACTGATGTTTGTGCCAGCGCTCAGCCTCGATGCCTGGTTG TTGGTCGCTCTGCCATTGGCGGGATTGTTCTTGGCTCGGGGCAGTAACGATCCGCTGTCCATCAACATCCGCTACGCCCT GCTGGTGGCACCGGGCCTTTTTGCCGGAGCGGTGTTTTGGTGGCAGCAGCGCAGCCAGCTGTTTGCGAGGCGCCGTTTGC GCCGCATTTGGACCGGGTGTGTGCTGCTCTCGCTGTTGTTGACGTTGATCAGTAATCCGAACCGAAGCCTGTCGTTTTTG GTGCCTGACAGCTTTGTTCCTTGGGTGCATGTCTCGCCGCTGCAGCAGTGGCGACATGGCCGTTTGGCTCGCCAAGCCCT GGCCGTGATTCCCCCTGAGGCGTCGGTGGCTGCCAATACGCCATTGATTCCACTGCTCTCGCACCGCCGGGTGTTGGTGC GCTTACCCGCTTGGTATCAGTGGCAAGACAGCGATGGGCAGCGCCAGAACGTCGATTGGGTGGCGATTGACACAGCTCAA GCCAGTCGGCGCGCCAAGGCGTTTGCCCCTGATCGACGCAGGCAGTTGCAACTCCAGTTGCAGCTGCGCGACTTACAGGG CCAGGGCTACAGCCCAGTGGCCAACGCTGATGGTGTTGTGGTGCTACGCCGCAGTTGA
Upstream 100 bases:
>100_bases CAAGGTGGTGGGGCCCGGCGACCAAGAGCAGGGTGATGTCCTGCCGATTTTCGTTATCGCCGGTGGGGGGCAATGAAACC CATCAATCGGAAACAGGTTA
Downstream 100 bases:
>100_bases AGATCATCTGCAGCTTGGGGATGTTTTTCTTTGCCCCTGGCTAAGACGAAATTGAGAGATCGTCCCTGATCAGTGGAACC CGTCTCCCTGTTTCGAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MRFLDLLSKKRQTAVNDPARWVWWAAGLFLLLGLLVQFWRLWSLSATYDQGIFNQVLWNSGHGRWFASSLSSQLSSAVLH GGLAPDPSYQRLGQHYTPLLLLWAPLVRWLGFAALPLVQVSLMTAAGLVLHRLARGLLPAGLAAAVACSFYCAQAVIGPT WCNFHDLCQLPLLVFLLLLGLLERRWWLLLLAALLIPLVREDTGVVLFGMALWMGLRRKAPWWVAALIGLWGAAWCVVVT SVLMPAVSADVSKRFMVENFGQYTPDAEELSSLEVLKGLLLQPWRLLWELINPPGKTLAYLAAQWLPLMFVPALSLDAWL LVALPLAGLFLARGSNDPLSINIRYALLVAPGLFAGAVFWWQQRSQLFARRRLRRIWTGCVLLSLLLTLISNPNRSLSFL VPDSFVPWVHVSPLQQWRHGRLARQALAVIPPEASVAANTPLIPLLSHRRVLVRLPAWYQWQDSDGQRQNVDWVAIDTAQ ASRRAKAFAPDRRRQLQLQLQLRDLQGQGYSPVANADGVVVLRRS
Sequences:
>Translated_525_residues MRFLDLLSKKRQTAVNDPARWVWWAAGLFLLLGLLVQFWRLWSLSATYDQGIFNQVLWNSGHGRWFASSLSSQLSSAVLH GGLAPDPSYQRLGQHYTPLLLLWAPLVRWLGFAALPLVQVSLMTAAGLVLHRLARGLLPAGLAAAVACSFYCAQAVIGPT WCNFHDLCQLPLLVFLLLLGLLERRWWLLLLAALLIPLVREDTGVVLFGMALWMGLRRKAPWWVAALIGLWGAAWCVVVT SVLMPAVSADVSKRFMVENFGQYTPDAEELSSLEVLKGLLLQPWRLLWELINPPGKTLAYLAAQWLPLMFVPALSLDAWL LVALPLAGLFLARGSNDPLSINIRYALLVAPGLFAGAVFWWQQRSQLFARRRLRRIWTGCVLLSLLLTLISNPNRSLSFL VPDSFVPWVHVSPLQQWRHGRLARQALAVIPPEASVAANTPLIPLLSHRRVLVRLPAWYQWQDSDGQRQNVDWVAIDTAQ ASRRAKAFAPDRRRQLQLQLQLRDLQGQGYSPVANADGVVVLRRS >Mature_525_residues MRFLDLLSKKRQTAVNDPARWVWWAAGLFLLLGLLVQFWRLWSLSATYDQGIFNQVLWNSGHGRWFASSLSSQLSSAVLH GGLAPDPSYQRLGQHYTPLLLLWAPLVRWLGFAALPLVQVSLMTAAGLVLHRLARGLLPAGLAAAVACSFYCAQAVIGPT WCNFHDLCQLPLLVFLLLLGLLERRWWLLLLAALLIPLVREDTGVVLFGMALWMGLRRKAPWWVAALIGLWGAAWCVVVT SVLMPAVSADVSKRFMVENFGQYTPDAEELSSLEVLKGLLLQPWRLLWELINPPGKTLAYLAAQWLPLMFVPALSLDAWL LVALPLAGLFLARGSNDPLSINIRYALLVAPGLFAGAVFWWQQRSQLFARRRLRRIWTGCVLLSLLLTLISNPNRSLSFL VPDSFVPWVHVSPLQQWRHGRLARQALAVIPPEASVAANTPLIPLLSHRRVLVRLPAWYQWQDSDGQRQNVDWVAIDTAQ ASRRAKAFAPDRRRQLQLQLQLRDLQGQGYSPVANADGVVVLRRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58904; Mature: 58904
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLDLLSKKRQTAVNDPARWVWWAAGLFLLLGLLVQFWRLWSLSATYDQGIFNQVLWNS CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC GHGRWFASSLSSQLSSAVLHGGLAPDPSYQRLGQHYTPLLLLWAPLVRWLGFAALPLVQV CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLMTAAGLVLHRLARGLLPAGLAAAVACSFYCAQAVIGPTWCNFHDLCQLPLLVFLLLLG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LLERRWWLLLLAALLIPLVREDTGVVLFGMALWMGLRRKAPWWVAALIGLWGAAWCVVVT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SVLMPAVSADVSKRFMVENFGQYTPDAEELSSLEVLKGLLLQPWRLLWELINPPGKTLAY HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LAAQWLPLMFVPALSLDAWLLVALPLAGLFLARGSNDPLSINIRYALLVAPGLFAGAVFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCHHHHHHHHH WQQRSQLFARRRLRRIWTGCVLLSLLLTLISNPNRSLSFLVPDSFVPWVHVSPLQQWRHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEECCHHHHHHHH RLARQALAVIPPEASVAANTPLIPLLSHRRVLVRLPAWYQWQDSDGQRQNVDWVAIDTAQ HHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEECCCCEEECCCCCCCCCCCEEEEECHH ASRRAKAFAPDRRRQLQLQLQLRDLQGQGYSPVANADGVVVLRRS HHHHHHCCCCCHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure MRFLDLLSKKRQTAVNDPARWVWWAAGLFLLLGLLVQFWRLWSLSATYDQGIFNQVLWNS CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC GHGRWFASSLSSQLSSAVLHGGLAPDPSYQRLGQHYTPLLLLWAPLVRWLGFAALPLVQV CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLMTAAGLVLHRLARGLLPAGLAAAVACSFYCAQAVIGPTWCNFHDLCQLPLLVFLLLLG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LLERRWWLLLLAALLIPLVREDTGVVLFGMALWMGLRRKAPWWVAALIGLWGAAWCVVVT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SVLMPAVSADVSKRFMVENFGQYTPDAEELSSLEVLKGLLLQPWRLLWELINPPGKTLAY HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LAAQWLPLMFVPALSLDAWLLVALPLAGLFLARGSNDPLSINIRYALLVAPGLFAGAVFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCHHHHHHHHH WQQRSQLFARRRLRRIWTGCVLLSLLLTLISNPNRSLSFLVPDSFVPWVHVSPLQQWRHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEECCHHHHHHHH RLARQALAVIPPEASVAANTPLIPLLSHRRVLVRLPAWYQWQDSDGQRQNVDWVAIDTAQ HHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEECCCCEEECCCCCCCCCCCEEEEECHH ASRRAKAFAPDRRRQLQLQLQLRDLQGQGYSPVANADGVVVLRRS HHHHHHCCCCCHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA