| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is yuiD [H]
Identifier: 148241851
GI number: 148241851
Start: 680821
End: 681309
Strand: Direct
Name: yuiD [H]
Synonym: SynRCC307_0752
Alternate gene names: 148241851
Gene position: 680821-681309 (Clockwise)
Preceding gene: 148241850
Following gene: 148241852
Centisome position: 30.6
GC content: 65.24
Gene sequence:
>489_bases ATGAGTCAGCCATTTGTTCAGCTGCTCGATAACGGCCCCTTGGCCTGGGGCCTTGCAGCCTGTGGCTTGGCGCAGCTCTC CAAACTCTTGATTGAGTTAGTGGTGCATCGCCGCTGGCGCCCGGCGGTGTTGATTGAAACCGGAGGCATGCCCTCATCCC ATTCGGCGCTGGTGACCGGCACGGCCGCTTGCATCGGCCTGGAGCAGGGATTTGATGCGCCCTTGTTTGCCCTGGCTGCG GCAGTGGCGTTTGTGGTGATGTACGACGCCAGTGGGGTGCGCCGGGCCGCTGGCCGCACCGCTGAGCGGGTCAACGCCCT GCCGGAGGCGCAGGGGATGCCGCCGCTGAAGACAACCCTGGGCCATTCGCGCCTGGAGGTGTTGGTGGGCAGCCTGCTGG GCCCATTGATTGGATTGGTGGGCGATGCCTTTGTGGGCAGCCCTGTTCATCTGGCGCAGCAGCTGGGCTGGTTCAGCGGG GTGGCCTGA
Upstream 100 bases:
>100_bases CTGAGTCGCTGGTCAAGGAGGCCTGCGGGGTTCTGAACCCCTGGAGCGACAAGGCCCAGCCCCTGCTGGCCCTGGCGGGT TACATCACCTCCCGCGATCG
Downstream 100 bases:
>100_bases GCTGGCCGATGCCGCTCCCGAGCTGACCGATGGTCAGCGTGTTGCCCTTGAGGGTTTCCAGGACTGGCTGACGGCCTCCG AGGCGGATTGCCCGTTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSQPFVQLLDNGPLAWGLAACGLAQLSKLLIELVVHRRWRPAVLIETGGMPSSHSALVTGTAACIGLEQGFDAPLFALAA AVAFVVMYDASGVRRAAGRTAERVNALPEAQGMPPLKTTLGHSRLEVLVGSLLGPLIGLVGDAFVGSPVHLAQQLGWFSG VA
Sequences:
>Translated_162_residues MSQPFVQLLDNGPLAWGLAACGLAQLSKLLIELVVHRRWRPAVLIETGGMPSSHSALVTGTAACIGLEQGFDAPLFALAA AVAFVVMYDASGVRRAAGRTAERVNALPEAQGMPPLKTTLGHSRLEVLVGSLLGPLIGLVGDAFVGSPVHLAQQLGWFSG VA >Mature_161_residues SQPFVQLLDNGPLAWGLAACGLAQLSKLLIELVVHRRWRPAVLIETGGMPSSHSALVTGTAACIGLEQGFDAPLFALAAA VAFVVMYDASGVRRAAGRTAERVNALPEAQGMPPLKTTLGHSRLEVLVGSLLGPLIGLVGDAFVGSPVHLAQQLGWFSGV A
Specific function: Unknown
COG id: COG1963
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003832 [H]
Pfam domain/function: PF02681 DUF212 [H]
EC number: NA
Molecular weight: Translated: 16804; Mature: 16673
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPFVQLLDNGPLAWGLAACGLAQLSKLLIELVVHRRWRPAVLIETGGMPSSHSALVTG CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHH TAACIGLEQGFDAPLFALAAAVAFVVMYDASGVRRAAGRTAERVNALPEAQGMPPLKTTL HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH GHSRLEVLVGSLLGPLIGLVGDAFVGSPVHLAQQLGWFSGVA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SQPFVQLLDNGPLAWGLAACGLAQLSKLLIELVVHRRWRPAVLIETGGMPSSHSALVTG CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHH TAACIGLEQGFDAPLFALAAAVAFVVMYDASGVRRAAGRTAERVNALPEAQGMPPLKTTL HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH GHSRLEVLVGSLLGPLIGLVGDAFVGSPVHLAQQLGWFSGVA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]