| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is gmk [H]
Identifier: 148241807
GI number: 148241807
Start: 640554
End: 641120
Strand: Direct
Name: gmk [H]
Synonym: SynRCC307_0708
Alternate gene names: 148241807
Gene position: 640554-641120 (Clockwise)
Preceding gene: 148241804
Following gene: 148241810
Centisome position: 28.79
GC content: 62.96
Gene sequence:
>567_bases GTGAGCCCAGCCCCGCATCAACCTCGCCTCACCGTTTTGAGTGGTCCCAGTGGCGTGGGCAAAGGCACCTTGGTGGGCCT GTTGCGTCAACGCCACCCGGAGCTGTGGTTATCGGTCTCCGCCACCACCCGTGCGCCGCGCCCTGGTGAGGAGAACGGCA TTCACTACTTCTTCCACAGCCAAGACAGCTTTCAGCAGCTCGTGGATCAAAGCGGGCTGCTGGAGTGGGCGAGCTTTGCT GGCAATTGCTACGGAACCCCCCGTCAGCCTGTGGAGGAGCGCTTGGCTGCCGGCGTGCCCGTGCTGCTTGAGATTGAGCT GGAGGGAGCCCGTCAGGTGCGCCAGAGCAGCCCTGATGCGTTTCAAATCTTTTTGCGCCCCCCATCGTTTGAGGAGTTGG AGCGCCGCATTCGTGGCCGTGGCACCGACAGTGACGAGGCCATCCAACGCCGCCTCGAGCGGGCGCGCCTGGAACTGCAA GCCGAATCAGAATTTGATGCTGTGGTGGAAAACGGTGAGCTCGATGTAGCCCTGCAGGAGCTGGAGCGCTTGATGGGCCT GGCGTAG
Upstream 100 bases:
>100_bases GAGTTCGTGGACCACGCCCCGCAGTGTTGTGGTGTCCTGCGGTTGCATGGCGCCTCCCTTCACGCCCTAGTTTCCACTCA GGCCCCATCTCTGCCGCTTC
Downstream 100 bases:
>100_bases CTCGCTGGGTTCAAGGCACAAAAAAAAGGCCCCTCAAAGGGACCTTCCTTGATTGGCTTGAAATCCTCGCTTCATAACGG GTGGAAGAGGAGATCAGGGA
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSPAPHQPRLTVLSGPSGVGKGTLVGLLRQRHPELWLSVSATTRAPRPGEENGIHYFFHSQDSFQQLVDQSGLLEWASFA GNCYGTPRQPVEERLAAGVPVLLEIELEGARQVRQSSPDAFQIFLRPPSFEELERRIRGRGTDSDEAIQRRLERARLELQ AESEFDAVVENGELDVALQELERLMGLA
Sequences:
>Translated_188_residues MSPAPHQPRLTVLSGPSGVGKGTLVGLLRQRHPELWLSVSATTRAPRPGEENGIHYFFHSQDSFQQLVDQSGLLEWASFA GNCYGTPRQPVEERLAAGVPVLLEIELEGARQVRQSSPDAFQIFLRPPSFEELERRIRGRGTDSDEAIQRRLERARLELQ AESEFDAVVENGELDVALQELERLMGLA >Mature_187_residues SPAPHQPRLTVLSGPSGVGKGTLVGLLRQRHPELWLSVSATTRAPRPGEENGIHYFFHSQDSFQQLVDQSGLLEWASFAG NCYGTPRQPVEERLAAGVPVLLEIELEGARQVRQSSPDAFQIFLRPPSFEELERRIRGRGTDSDEAIQRRLERARLELQA ESEFDAVVENGELDVALQELERLMGLA
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874831, Length=179, Percent_Identity=39.6648044692737, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI226874833, Length=179, Percent_Identity=39.6648044692737, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI4504221, Length=179, Percent_Identity=39.6648044692737, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI21389483, Length=181, Percent_Identity=29.8342541436464, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI186972120, Length=182, Percent_Identity=27.4725274725275, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI186700629, Length=182, Percent_Identity=27.4725274725275, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI186700627, Length=182, Percent_Identity=27.4725274725275, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI38570142, Length=188, Percent_Identity=30.3191489361702, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI14780902, Length=184, Percent_Identity=27.7173913043478, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI4505237, Length=175, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI262118263, Length=175, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI262118259, Length=175, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI262118255, Length=175, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI21361598, Length=189, Percent_Identity=26.984126984127, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI111154074, Length=159, Percent_Identity=29.559748427673, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1790080, Length=181, Percent_Identity=44.1988950276243, Blast_Score=164, Evalue=3e-42, Organism=Caenorhabditis elegans, GI193203132, Length=182, Percent_Identity=40.6593406593407, Blast_Score=141, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17508835, Length=182, Percent_Identity=40.6593406593407, Blast_Score=140, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71988041, Length=187, Percent_Identity=24.5989304812834, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71988048, Length=179, Percent_Identity=25.1396648044693, Blast_Score=74, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17557440, Length=187, Percent_Identity=25.668449197861, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320662, Length=182, Percent_Identity=40.6593406593407, Blast_Score=137, Evalue=1e-33, Organism=Drosophila melanogaster, GI21356141, Length=182, Percent_Identity=38.4615384615385, Blast_Score=133, Evalue=8e-32, Organism=Drosophila melanogaster, GI221330162, Length=194, Percent_Identity=28.8659793814433, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI221330166, Length=194, Percent_Identity=28.8659793814433, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI221330164, Length=194, Percent_Identity=28.8659793814433, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 20968; Mature: 20837
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPAPHQPRLTVLSGPSGVGKGTLVGLLRQRHPELWLSVSATTRAPRPGEENGIHYFFHS CCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEC QDSFQQLVDQSGLLEWASFAGNCYGTPRQPVEERLAAGVPVLLEIELEGARQVRQSSPDA CHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEEECCHHHHHHHCCCCE FQIFLRPPSFEELERRIRGRGTDSDEAIQRRLERARLELQAESEFDAVVENGELDVALQE EEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHH LERLMGLA HHHHHCCC >Mature Secondary Structure SPAPHQPRLTVLSGPSGVGKGTLVGLLRQRHPELWLSVSATTRAPRPGEENGIHYFFHS CCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEC QDSFQQLVDQSGLLEWASFAGNCYGTPRQPVEERLAAGVPVLLEIELEGARQVRQSSPDA CHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEEECCHHHHHHHCCCCE FQIFLRPPSFEELERRIRGRGTDSDEAIQRRLERARLELQAESEFDAVVENGELDVALQE EEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHH LERLMGLA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA