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The map label for this gene is gcp [H]

Identifier: 148241810

GI number: 148241810

Start: 641838

End: 642908

Strand: Direct

Name: gcp [H]

Synonym: SynRCC307_0711

Alternate gene names: 148241810

Gene position: 641838-642908 (Clockwise)

Preceding gene: 148241807

Following gene: 148241811

Centisome position: 28.85

GC content: 65.45

Gene sequence:

>1071_bases
GTGCGCTCTCCCTGCCATATGCCCACGGTCCTTGCCCTCGAAACAAGTTGTGACGAGTCGGCCGCTGCCGTCGTTCGCGA
CAACGTGGTGCTCAGCAGTGAAGTGGCCAGTCAGGTGGCTGAGCATGCCCAGTTCGGTGGCGTGGTGCCTGAGCTGGCCT
CTCGCCGCCATGTGGAGGCGTTGCCATGGCTGGTGGAGCGGGCTTTGCTGCAGGCTCAGCTGCCTTTAAGTGCCATGGAT
GCGGTGGCGGCCACGGTGGCCCCTGGGCTCTCAGGAGCTCTGCTGGTGGGCTCTGTGACAGGCCGCAGCTTGGCGCGGCT
GGCAGGTGTGCCATTCGTGGGGATTCATCACTTGGAAGGCCATCTCTGTTCGGCCCTCAGTGGTGATCTGGCGCCCCAGC
TGCCGTTGTTGGTGCTGCTGGTTTCAGGTGGTCACACCGAGTTGATCGCCATGCGCGCTGAGGGCGATTACGAGCGCCTC
GGCGGCAGTCGTGACGATGCCGCTGGCGAAGCCTTTGACAAGGTGGCGCGCCTGTTGGGGTTGGGCTACCCCGGTGGCCC
TGCGATCGAAGCTGCCGCCCGCGGCGGTGATCCCGATCGTTTTGCGTTTCCGCCGGGGCGCATCTCGCTACCCGGGGGTG
GATTTCACCCCTACGACTTCAGTTTCAGTGGCCTCAAAACAGCTGTGCTGCGCGAAGTGGAGCGCTGGCGCCAGCAGGGA
GAGGAGCTGCCGGTGGCTGATTTGGCCGCCTCATTTCAAGCAGTGGTGTGCCGCGTGCTGGTTGAGCGCAGCGTGCGCTG
CGCGGAAGACCATGGCCTCAACGGTGTGGTGGTGGTGGGCGGTGTCTCCGCTAATGCCGCCTTGCGCGAGCGGTTGCAAC
GGGTCAGCCAGGAGCGCGGCCTGGCTTTGCACTTGGCCCCCTTGGCCTGGTGCACCGATAACGCCGCCATGATTGGCTTG
GCGGCTTGCCGCCGCTTTGGCGCGCAGCAGCAGTCGTCGTTGCAGCTGGGTGTGGCGCCCCGTTGGCCGTTGGGTGAGAC
CGATGCCTTGTATGGGCCGCCACCGTTTTGA

Upstream 100 bases:

>100_bases
CCATCGGGGCGAAGCCGAAGAGAAGGAAGCCGCTCAGCAGGACGGCAAAGAGTCGACGCATGATGGACAGGGCCGCACGC
GGGTGTTGTGCGGAGATTAG

Downstream 100 bases:

>100_bases
GCCGAAATTCGTTTTACGGTTGTGCCATGACCGAGCAAAGCACCGTGGACGCCCCCGAGCAGGTGGATGCCAGCGAACTC
AACTCTTGGCGCCGGGGGTT

Product: o-sialoglycoprotein endopeptidase

Products: NA

Alternate protein names: Glycoprotease [H]

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MRSPCHMPTVLALETSCDESAAAVVRDNVVLSSEVASQVAEHAQFGGVVPELASRRHVEALPWLVERALLQAQLPLSAMD
AVAATVAPGLSGALLVGSVTGRSLARLAGVPFVGIHHLEGHLCSALSGDLAPQLPLLVLLVSGGHTELIAMRAEGDYERL
GGSRDDAAGEAFDKVARLLGLGYPGGPAIEAAARGGDPDRFAFPPGRISLPGGGFHPYDFSFSGLKTAVLREVERWRQQG
EELPVADLAASFQAVVCRVLVERSVRCAEDHGLNGVVVVGGVSANAALRERLQRVSQERGLALHLAPLAWCTDNAAMIGL
AACRRFGAQQQSSLQLGVAPRWPLGETDALYGPPPF

Sequences:

>Translated_356_residues
MRSPCHMPTVLALETSCDESAAAVVRDNVVLSSEVASQVAEHAQFGGVVPELASRRHVEALPWLVERALLQAQLPLSAMD
AVAATVAPGLSGALLVGSVTGRSLARLAGVPFVGIHHLEGHLCSALSGDLAPQLPLLVLLVSGGHTELIAMRAEGDYERL
GGSRDDAAGEAFDKVARLLGLGYPGGPAIEAAARGGDPDRFAFPPGRISLPGGGFHPYDFSFSGLKTAVLREVERWRQQG
EELPVADLAASFQAVVCRVLVERSVRCAEDHGLNGVVVVGGVSANAALRERLQRVSQERGLALHLAPLAWCTDNAAMIGL
AACRRFGAQQQSSLQLGVAPRWPLGETDALYGPPPF
>Mature_356_residues
MRSPCHMPTVLALETSCDESAAAVVRDNVVLSSEVASQVAEHAQFGGVVPELASRRHVEALPWLVERALLQAQLPLSAMD
AVAATVAPGLSGALLVGSVTGRSLARLAGVPFVGIHHLEGHLCSALSGDLAPQLPLLVLLVSGGHTELIAMRAEGDYERL
GGSRDDAAGEAFDKVARLLGLGYPGGPAIEAAARGGDPDRFAFPPGRISLPGGGFHPYDFSFSGLKTAVLREVERWRQQG
EELPVADLAASFQAVVCRVLVERSVRCAEDHGLNGVVVVGGVSANAALRERLQRVSQERGLALHLAPLAWCTDNAAMIGL
AACRRFGAQQQSSLQLGVAPRWPLGETDALYGPPPF

Specific function: Could Be A Metalloprotease. [C]

COG id: COG0533

COG function: function code O; Metal-dependent proteases with possible chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Homo sapiens, GI116812636, Length=342, Percent_Identity=34.5029239766082, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI8923380, Length=350, Percent_Identity=31.4285714285714, Blast_Score=130, Evalue=2e-30,
Organism=Escherichia coli, GI1789445, Length=339, Percent_Identity=46.0176991150442, Blast_Score=268, Evalue=4e-73,
Organism=Caenorhabditis elegans, GI17557464, Length=326, Percent_Identity=31.2883435582822, Blast_Score=130, Evalue=7e-31,
Organism=Caenorhabditis elegans, GI71995670, Length=344, Percent_Identity=29.3604651162791, Blast_Score=109, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6320099, Length=363, Percent_Identity=28.3746556473829, Blast_Score=117, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6322891, Length=295, Percent_Identity=26.7796610169492, Blast_Score=89, Evalue=9e-19,
Organism=Drosophila melanogaster, GI20129063, Length=339, Percent_Identity=32.7433628318584, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI21357207, Length=332, Percent_Identity=30.7228915662651, Blast_Score=137, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022450
- InterPro:   IPR000905
- InterPro:   IPR017860
- InterPro:   IPR017861 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: =3.4.24.57 [H]

Molecular weight: Translated: 37354; Mature: 37354

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPCHMPTVLALETSCDESAAAVVRDNVVLSSEVASQVAEHAQFGGVVPELASRRHVEA
CCCCCCCCEEEEEECCCCHHHHHHHHCCEEEHHHHHHHHHHHHHHCCHHHHHHCCCHHHH
LPWLVERALLQAQLPLSAMDAVAATVAPGLSGALLVGSVTGRSLARLAGVPFVGIHHLEG
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCEEEHHHHHH
HLCSALSGDLAPQLPLLVLLVSGGHTELIAMRAEGDYERLGGSRDDAAGEAFDKVARLLG
HHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHH
LGYPGGPAIEAAARGGDPDRFAFPPGRISLPGGGFHPYDFSFSGLKTAVLREVERWRQQG
CCCCCCHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
EELPVADLAASFQAVVCRVLVERSVRCAEDHGLNGVVVVGGVSANAALRERLQRVSQERG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCC
LALHLAPLAWCTDNAAMIGLAACRRFGAQQQSSLQLGVAPRWPLGETDALYGPPPF
CEEEECHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSPCHMPTVLALETSCDESAAAVVRDNVVLSSEVASQVAEHAQFGGVVPELASRRHVEA
CCCCCCCCEEEEEECCCCHHHHHHHHCCEEEHHHHHHHHHHHHHHCCHHHHHHCCCHHHH
LPWLVERALLQAQLPLSAMDAVAATVAPGLSGALLVGSVTGRSLARLAGVPFVGIHHLEG
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCEEEHHHHHH
HLCSALSGDLAPQLPLLVLLVSGGHTELIAMRAEGDYERLGGSRDDAAGEAFDKVARLLG
HHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHH
LGYPGGPAIEAAARGGDPDRFAFPPGRISLPGGGFHPYDFSFSGLKTAVLREVERWRQQG
CCCCCCHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
EELPVADLAASFQAVVCRVLVERSVRCAEDHGLNGVVVVGGVSANAALRERLQRVSQERG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCC
LALHLAPLAWCTDNAAMIGLAACRRFGAQQQSSLQLGVAPRWPLGETDALYGPPPF
CEEEECHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA