| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is trxA [H]
Identifier: 148241752
GI number: 148241752
Start: 592803
End: 593135
Strand: Direct
Name: trxA [H]
Synonym: SynRCC307_0653
Alternate gene names: 148241752
Gene position: 592803-593135 (Clockwise)
Preceding gene: 148241751
Following gene: 148241753
Centisome position: 26.64
GC content: 63.36
Gene sequence:
>333_bases GTGCCGCCTCCAGTGACTGTCCACAGCCTCAGTGATGCCAACTTCCAGGCCGAGGTGATGGAGTATTCCGGACTGGTATT GGTGGATGTGTGGGCCACCTGGTGCGGCCCCTGCCGCCTGATGGCGCCGTTGATGGATTGGGCCGCCAGCACCTATGGCG ATGGCCTCAAGGTGGGCAAGTTGGAGGCTGACCCCAATCCCACCAGCCGCGATGCTCTGCAAGTGCAGGGGTTGCCGGCC TTGGTGCTGTTCCGCAATGGCCAGGAATTGGCGCGCCATGAGGGCGCCATGGCGCAGCCCCAGTTGAAGGCCTTCTTGGA TGCCCATCTCTGA
Upstream 100 bases:
>100_bases CTGCCCAGCAGGCCCAGGTCGATGAGGAGCTCGAGTCGCTGAAGCGCTCGATCGATCAGCTCTAACGCCCGGCCAGCTGC CTAGGATCAGTCCTGTTTGA
Downstream 100 bases:
>100_bases GCGTCTCGGGCAACTGGGCTCCGGCGTTTTTGGCCGGGTTGACGGTGAAAAACGCAGTTACCGCCTCTCGCAGCAACAGC CGCAGCGTCCGCTGATTGAT
Product: thioredoxin
Products: NA
Alternate protein names: Trx-2 [H]
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MPPPVTVHSLSDANFQAEVMEYSGLVLVDVWATWCGPCRLMAPLMDWAASTYGDGLKVGKLEADPNPTSRDALQVQGLPA LVLFRNGQELARHEGAMAQPQLKAFLDAHL
Sequences:
>Translated_110_residues MPPPVTVHSLSDANFQAEVMEYSGLVLVDVWATWCGPCRLMAPLMDWAASTYGDGLKVGKLEADPNPTSRDALQVQGLPA LVLFRNGQELARHEGAMAQPQLKAFLDAHL >Mature_109_residues PPPVTVHSLSDANFQAEVMEYSGLVLVDVWATWCGPCRLMAPLMDWAASTYGDGLKVGKLEADPNPTSRDALQVQGLPAL VLFRNGQELARHEGAMAQPQLKAFLDAHL
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI87082331, Length=104, Percent_Identity=43.2692307692308, Blast_Score=102, Evalue=8e-24,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 11945; Mature: 11814
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPVTVHSLSDANFQAEVMEYSGLVLVDVWATWCGPCRLMAPLMDWAASTYGDGLKVGK CCCCCEEECCCCCCCCEEEHHCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCEEEEE LEADPNPTSRDALQVQGLPALVLFRNGQELARHEGAMAQPQLKAFLDAHL EECCCCCCCCCEEEECCCCEEEEEECCHHHHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure PPPVTVHSLSDANFQAEVMEYSGLVLVDVWATWCGPCRLMAPLMDWAASTYGDGLKVGK CCCCEEECCCCCCCCEEEHHCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCEEEEE LEADPNPTSRDALQVQGLPALVLFRNGQELARHEGAMAQPQLKAFLDAHL EECCCCCCCCCEEEECCCCEEEEEECCHHHHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2492494; 11759840; 8590004 [H]