| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is manC [H]
Identifier: 148241748
GI number: 148241748
Start: 588202
End: 589653
Strand: Direct
Name: manC [H]
Synonym: SynRCC307_0649
Alternate gene names: 148241748
Gene position: 588202-589653 (Clockwise)
Preceding gene: 148241747
Following gene: 148241749
Centisome position: 26.44
GC content: 64.26
Gene sequence:
>1452_bases ATGCCCAAGACCTCTGCATTGCTGCCGGTGATCCTTTGTGGTGGCACGGGCACCCGCCTGTGGCCCCTATCGCGGGCGAG TTACCCCAAGCAGTATTGGGCCCTGGCCCATAACGCCGAAGACACGCTGCTGCAGCTCACCCAACGGCGCCTCGAAGGCT TGCCGGGTCTGGGCTCACCGATCTTGATCTGCAACGAAGACCACCGCTTCATCGTGGCCGAGCAGATGCGCCAGCTCGGG GTGGAGCCGGAGTCGATCTTGCTGGAGCCCATGGGCCGCAACACCGCTCCGGCGGTGTGTGTGGCGGCGTTGCGGGCTAC CGCTCGCGGTGAAGACCCCTTGCTGCTGGTGCTGGCGGCTGATCACGTCATCCGTGAGCCCGAGAAGTTCCGCGCCACGG TGGAAGCCGGGATTCCGGCGGCGGAAGCGGGCCGGCTGGTGACCTTTGGCATCGTGCCCACGGCCCCGGAAACGGGCTAC GGCTACATCGAATCGGCTGAGGCCCTCAATGCCTCCTCGCCGGTGCCGATTGCCCGCTTTGTGGAGAAGCCTGATCGCGC CACCGCCGAGCAGTTTTTGGCCAGTGGCCGTTTCACTTGGAACAGCGGCATGTTCCTGTTCCGCGCCAGCGCCATGCTCG CCGAACTCGAGCGCCTGGCCCCTGAATTGGTGAGCTGCTGCCGCTCGGCCCTGGAGCACGACACCCCCGACTTGCAGTTC TTGCGGCTTGATCGTGAGGCCTTTGCCCAATGCCCTTCGGTGGCTCTCGATGTGGCTGTGATGGAGCGCACGCCGCTGGG TTCGGTGTTGCCGCTTGATGCCGGTTGGAGTGATGTGGGCAGCTGGAGTGCCCTATGGGAAACCGCTGATCAAGACGAGA ACGGCAACGTCTTGCGCGGTCGCGTGATCTCGGAAGGCAGCCGCAACTGTTATCTGCGCAGTGAGCACCGCCTGGTGGTG GGCCTGGGCGTTGAAAACCTGGTGGTGGTGGAAACCGATGACGCCGTGTTGATCGCTGAGCGCAGCCAGGCGCAAAACGT CAAAGCGATCGTTCAGCAGCTCGAAGCCGACGGCAGCTCAGAAGGCAAAGCCCACCGGCGCATCTACCGGCCTTGGGGCC ACTACACCTCCATCGTTGAGGGCAGCCGCTGGCAGGTGAAGCGCATTTCGGTGAAGCCTGGCGCCAGCCTGTCGCTGCAG ATGCACCACCACCGCGCCGAGCATTGGGTGGTGGTGCGCGGCACGGCCCTGGTGGAGAAGAATGGAGTGGAGGAGCTGAT TGGTGAAAACCAGAGCACCTACATCCCCTTAGGGGCGCAGCATCGCCTCAGCAACCCGGGCAAGATCCCGGTGGAGATGA TCGAGATCCAAAGCGGCGCCTACCTTGGTGAAGACGACATCGTCCGCCTCGAAGATGTCTACGGCCGCTCGACGGCCGTA AGCCGTGCCTGA
Upstream 100 bases:
>100_bases TTGCAGCAGCGTGGCCAGGCCTTAGCGGCCTCCGGTGTGGAATCCACCTGGCGCCTGCCCAACCTCGAGCGATACTGAGC GCCCCCGTTCGGCTAGGTCC
Downstream 100 bases:
>100_bases AGCCGCTGGATTTCTTGCTGCTGCCAGCACGCCGCACGGGTTAATCACCCTGCTGGTGTTTGCCGTTTCGCTGGTTCTGT TCATCAGCGGTTGGTTGGCG
Product: mannose-1-phosphate guanylyltransferase
Products: NA
Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyl transferase; GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MPKTSALLPVILCGGTGTRLWPLSRASYPKQYWALAHNAEDTLLQLTQRRLEGLPGLGSPILICNEDHRFIVAEQMRQLG VEPESILLEPMGRNTAPAVCVAALRATARGEDPLLLVLAADHVIREPEKFRATVEAGIPAAEAGRLVTFGIVPTAPETGY GYIESAEALNASSPVPIARFVEKPDRATAEQFLASGRFTWNSGMFLFRASAMLAELERLAPELVSCCRSALEHDTPDLQF LRLDREAFAQCPSVALDVAVMERTPLGSVLPLDAGWSDVGSWSALWETADQDENGNVLRGRVISEGSRNCYLRSEHRLVV GLGVENLVVVETDDAVLIAERSQAQNVKAIVQQLEADGSSEGKAHRRIYRPWGHYTSIVEGSRWQVKRISVKPGASLSLQ MHHHRAEHWVVVRGTALVEKNGVEELIGENQSTYIPLGAQHRLSNPGKIPVEMIEIQSGAYLGEDDIVRLEDVYGRSTAV SRA
Sequences:
>Translated_483_residues MPKTSALLPVILCGGTGTRLWPLSRASYPKQYWALAHNAEDTLLQLTQRRLEGLPGLGSPILICNEDHRFIVAEQMRQLG VEPESILLEPMGRNTAPAVCVAALRATARGEDPLLLVLAADHVIREPEKFRATVEAGIPAAEAGRLVTFGIVPTAPETGY GYIESAEALNASSPVPIARFVEKPDRATAEQFLASGRFTWNSGMFLFRASAMLAELERLAPELVSCCRSALEHDTPDLQF LRLDREAFAQCPSVALDVAVMERTPLGSVLPLDAGWSDVGSWSALWETADQDENGNVLRGRVISEGSRNCYLRSEHRLVV GLGVENLVVVETDDAVLIAERSQAQNVKAIVQQLEADGSSEGKAHRRIYRPWGHYTSIVEGSRWQVKRISVKPGASLSLQ MHHHRAEHWVVVRGTALVEKNGVEELIGENQSTYIPLGAQHRLSNPGKIPVEMIEIQSGAYLGEDDIVRLEDVYGRSTAV SRA >Mature_482_residues PKTSALLPVILCGGTGTRLWPLSRASYPKQYWALAHNAEDTLLQLTQRRLEGLPGLGSPILICNEDHRFIVAEQMRQLGV EPESILLEPMGRNTAPAVCVAALRATARGEDPLLLVLAADHVIREPEKFRATVEAGIPAAEAGRLVTFGIVPTAPETGYG YIESAEALNASSPVPIARFVEKPDRATAEQFLASGRFTWNSGMFLFRASAMLAELERLAPELVSCCRSALEHDTPDLQFL RLDREAFAQCPSVALDVAVMERTPLGSVLPLDAGWSDVGSWSALWETADQDENGNVLRGRVISEGSRNCYLRSEHRLVVG LGVENLVVVETDDAVLIAERSQAQNVKAIVQQLEADGSSEGKAHRRIYRPWGHYTSIVEGSRWQVKRISVKPGASLSLQM HHHRAEHWVVVRGTALVEKNGVEELIGENQSTYIPLGAQHRLSNPGKIPVEMIEIQSGAYLGEDDIVRLEDVYGRSTAVS RA
Specific function: Involved in xanthan production [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=477, Percent_Identity=55.9748427672956, Blast_Score=526, Evalue=1e-150,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =5.3.1.8; =2.7.7.13 [H]
Molecular weight: Translated: 52896; Mature: 52765
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTSALLPVILCGGTGTRLWPLSRASYPKQYWALAHNAEDTLLQLTQRRLEGLPGLGSP CCCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC ILICNEDHRFIVAEQMRQLGVEPESILLEPMGRNTAPAVCVAALRATARGEDPLLLVLAA EEEECCCCCEEHHHHHHHHCCCHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEC DHVIREPEKFRATVEAGIPAAEAGRLVTFGIVPTAPETGYGYIESAEALNASSPVPIARF CHHHCCCHHHHHHHHCCCCCHHCCCEEEEEEECCCCCCCCCCEECHHHCCCCCCCCHHHH VEKPDRATAEQFLASGRFTWNSGMFLFRASAMLAELERLAPELVSCCRSALEHDTPDLQF HCCCCHHHHHHHHHCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE LRLDREAFAQCPSVALDVAVMERTPLGSVLPLDAGWSDVGSWSALWETADQDENGNVLRG EEECHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCEEEE RVISEGSRNCYLRSEHRLVVGLGVENLVVVETDDAVLIAERSQAQNVKAIVQQLEADGSS EEECCCCCCEEEECCCEEEEEECCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCC EGKAHRRIYRPWGHYTSIVEGSRWQVKRISVKPGASLSLQMHHHRAEHWVVVRGTALVEK CCCHHHHHCCCCCHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEEEEEEECC NGVEELIGENQSTYIPLGAQHRLSNPGKIPVEMIEIQSGAYLGEDDIVRLEDVYGRSTAV CCHHHHHCCCCCEEEECCCHHCCCCCCCCCEEEEEEECCCEECCCCCEEEHHHCCCCHHC SRA CCC >Mature Secondary Structure PKTSALLPVILCGGTGTRLWPLSRASYPKQYWALAHNAEDTLLQLTQRRLEGLPGLGSP CCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC ILICNEDHRFIVAEQMRQLGVEPESILLEPMGRNTAPAVCVAALRATARGEDPLLLVLAA EEEECCCCCEEHHHHHHHHCCCHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEC DHVIREPEKFRATVEAGIPAAEAGRLVTFGIVPTAPETGYGYIESAEALNASSPVPIARF CHHHCCCHHHHHHHHCCCCCHHCCCEEEEEEECCCCCCCCCCEECHHHCCCCCCCCHHHH VEKPDRATAEQFLASGRFTWNSGMFLFRASAMLAELERLAPELVSCCRSALEHDTPDLQF HCCCCHHHHHHHHHCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE LRLDREAFAQCPSVALDVAVMERTPLGSVLPLDAGWSDVGSWSALWETADQDENGNVLRG EEECHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCEEEE RVISEGSRNCYLRSEHRLVVGLGVENLVVVETDDAVLIAERSQAQNVKAIVQQLEADGSS EEECCCCCCEEEECCCEEEEEECCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCC EGKAHRRIYRPWGHYTSIVEGSRWQVKRISVKPGASLSLQMHHHRAEHWVVVRGTALVEK CCCHHHHHCCCCCHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEEEEEEECC NGVEELIGENQSTYIPLGAQHRLSNPGKIPVEMIEIQSGAYLGEDDIVRLEDVYGRSTAV CCHHHHHCCCCCEEEECCCHHCCCCCCCCCEEEEEEECCCEECCCCCEEEHHHCCCCHHC SRA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1370280; 11589581 [H]