| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241746
Identifier: 148241746
GI number: 148241746
Start: 584442
End: 586406
Strand: Direct
Name: 148241746
Synonym: SynRCC307_0647
Alternate gene names: NA
Gene position: 584442-586406 (Clockwise)
Preceding gene: 148241745
Following gene: 148241747
Centisome position: 26.27
GC content: 68.04
Gene sequence:
>1965_bases TTGTGCTGGACCATGGATCCCCGCTCCGGCGTGATCCTGATCTGCGGTCTCGGCGGGCTGGGGCAAGCCTGCCTGCGCAC CCTGATCGGCTTTGAGGCTGAGATCCACTGCATCGATCAACGCCAGCCTCGCTGGGTGGATGCGCTGCTGGCTGATCAGT ACGGCGCCAACCTGCTCATCGGCGACATGCGCAGCCCGCAAGTGCTGCGGATGGGGCGCGCAGCAGACGCCCGCGCGGTG CTGCTGCTCAGCCATGACAGCGCCATCAACCTGGAGGCGGCCTTGCAGGTGCGGCTGCTCAATCCCAAGGCTCAGCTGGT GGTGCGCACCAACAGCCGCCGCAACCTGGAGCGCCAGCTGCAGCAGCGGCTACCGGGGTTGGCAACGGTGGACCCAAGCC TGCTGACTGCCGGCGTCTTTGCCAATGCCCTGCGCACCGATGGCACCGAGGCAGCGTTCGCACTTGGCGATGAGCTGTTT CGTGTCCGTAGCCGCACCGTGCAGCACGACAGCGCCCGCGACCTGTTTGATCTGCTGGGCCGCCGCGAGCGCCTGGTGCA GTGGGTGCCGGCCGAGGGCAGCCCCGGAGGCGCCCCGGCCAGCCAGTGGTGGGACCTCGATGATCGCCCCCGCAGCGGTG ATCGGCTGCTCTGCCTTGAGCTGGCCAGCACCCTGGAGACCCGCCCGCCCCGGCGCCACCGGTTGCGCGCGGCGATGGCT CCATGGCTGCACCGCCTCGACAACCTCAGGGAGATGGTTCAACGCAGCGTGCGCCGCCGCGATCCCCTGCTGCTGTGGGG GTGTGGGTTGCTGCTGCTGGCCCTGATCGCTGGCAGCAGCGCTTTTGGCTCCGGTTCAGCCATGGGGGGGCTGCTGCTGA CCTTGGCCCTGCTGAAGGGTGAGTTTCTGGATTCGGTTGGCTTCTTGGTCGAGGACAACCCCATGGCAACGGACAACCTG GCGTTGGCCTACCTCAGCCTGCTGTATGCCGTGGTGGGCACCTTCCTGACGGCCTGGCTGGTGGCCGTGATCCTCGATCG CCTGTTGGCCCAGCGCCTCGGCCGGCGTCAGCCCCGCCCGCTGCCTGCGGGCAGCCAATACGTGCTGTTGCTGGAAGGGG GGCGGCTGGCGGAACGGCTGGCGAGCTTGCTGCAGCTGCAGAAATTCAAGGTGGTTCGCGTCGAACCCGATGGCACCGGC ATGGCCTACACGCAACTGGATCAGGCCCAGCGGGCCCTGCGGCGCAGCAGTTGCCAGGCGGTGGGAGTGCTTGGAGCTGA TCTGGTGGACAACCTCGACACGGCCTTGGAGCTGCAGGAGCGCTGGCCCGGCGTTCGCTTGGCCGTGCAGGCCCAGTCGC TGGCGGATGGGGCCAAGCTCAGCGGCTTGTTCAGCGACATGCAGGTAATCAACCCGCTGCAGGTGGCGGCTGATGCGGTG GTGGCCACTGCCTTTGGCGAGCGGGTGCGCGGGGTGTTGCGGCTGGCGGAGGACAACCTGCTGCTCACCGATTACCGCAT CGAGCCTGGCGACACCCTGGTGGGTTTGAGTCTGGCTGCCGTCTCGGGCGGATACGGCTTGATCCCGTTGCAGGTGACGC CGCTGGGGCAGCGCAAGCCCATCGTGTTGCCCAATCTCGAGCGGGTGCTGCAGCCCGGCGATGCCTTGGTGGTGATGGCC GATCTCCAGGCCCTGCTGGCTGTGGAGAACGGAACGCTCGCCCCGCCGCGCTGGCAGCTGGAGGTGCGGGGCTGCCGCCG CAATTGCAATGGCTTTGAAGCCCAGGTGCTGCTGGCGCGCTATCTGGCCCAAGCCCCTGGTGAGGTTGGCCGCTACCTCG AGACCGCCGCAGGCCCCCAGCGCACCAAGCCCATCTATCAAGCCCCTGGCCGGCTTCTGCAGCAGGGCCTCACCCGCCTT GGGGTTGAGTGCTCCCTAGTGGCTGCTGCCCAGACCCCTGCATAG
Upstream 100 bases:
>100_bases TTTGGCCTGCCGCGCTCAGGCGGAGCGCCGCTTTGGATTGGACGCCTTTGGCGCGCGCTTGGAAGCCTGGTTGCAGCAGC CTGGCTAGCGTTGAAAGGGT
Downstream 100 bases:
>100_bases GCTGGCCTGCATTTCTAACCCCAGCCTTTGGCTTTGATTCGTCGGCAGCGACTGTGGCTGGTGCTGGCTGTGCTGGCGAT GGGGGCGCTGCTGTTTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 654; Mature: 654
Protein sequence:
>654_residues MCWTMDPRSGVILICGLGGLGQACLRTLIGFEAEIHCIDQRQPRWVDALLADQYGANLLIGDMRSPQVLRMGRAADARAV LLLSHDSAINLEAALQVRLLNPKAQLVVRTNSRRNLERQLQQRLPGLATVDPSLLTAGVFANALRTDGTEAAFALGDELF RVRSRTVQHDSARDLFDLLGRRERLVQWVPAEGSPGGAPASQWWDLDDRPRSGDRLLCLELASTLETRPPRRHRLRAAMA PWLHRLDNLREMVQRSVRRRDPLLLWGCGLLLLALIAGSSAFGSGSAMGGLLLTLALLKGEFLDSVGFLVEDNPMATDNL ALAYLSLLYAVVGTFLTAWLVAVILDRLLAQRLGRRQPRPLPAGSQYVLLLEGGRLAERLASLLQLQKFKVVRVEPDGTG MAYTQLDQAQRALRRSSCQAVGVLGADLVDNLDTALELQERWPGVRLAVQAQSLADGAKLSGLFSDMQVINPLQVAADAV VATAFGERVRGVLRLAEDNLLLTDYRIEPGDTLVGLSLAAVSGGYGLIPLQVTPLGQRKPIVLPNLERVLQPGDALVVMA DLQALLAVENGTLAPPRWQLEVRGCRRNCNGFEAQVLLARYLAQAPGEVGRYLETAAGPQRTKPIYQAPGRLLQQGLTRL GVECSLVAAAQTPA
Sequences:
>Translated_654_residues MCWTMDPRSGVILICGLGGLGQACLRTLIGFEAEIHCIDQRQPRWVDALLADQYGANLLIGDMRSPQVLRMGRAADARAV LLLSHDSAINLEAALQVRLLNPKAQLVVRTNSRRNLERQLQQRLPGLATVDPSLLTAGVFANALRTDGTEAAFALGDELF RVRSRTVQHDSARDLFDLLGRRERLVQWVPAEGSPGGAPASQWWDLDDRPRSGDRLLCLELASTLETRPPRRHRLRAAMA PWLHRLDNLREMVQRSVRRRDPLLLWGCGLLLLALIAGSSAFGSGSAMGGLLLTLALLKGEFLDSVGFLVEDNPMATDNL ALAYLSLLYAVVGTFLTAWLVAVILDRLLAQRLGRRQPRPLPAGSQYVLLLEGGRLAERLASLLQLQKFKVVRVEPDGTG MAYTQLDQAQRALRRSSCQAVGVLGADLVDNLDTALELQERWPGVRLAVQAQSLADGAKLSGLFSDMQVINPLQVAADAV VATAFGERVRGVLRLAEDNLLLTDYRIEPGDTLVGLSLAAVSGGYGLIPLQVTPLGQRKPIVLPNLERVLQPGDALVVMA DLQALLAVENGTLAPPRWQLEVRGCRRNCNGFEAQVLLARYLAQAPGEVGRYLETAAGPQRTKPIYQAPGRLLQQGLTRL GVECSLVAAAQTPA >Mature_654_residues MCWTMDPRSGVILICGLGGLGQACLRTLIGFEAEIHCIDQRQPRWVDALLADQYGANLLIGDMRSPQVLRMGRAADARAV LLLSHDSAINLEAALQVRLLNPKAQLVVRTNSRRNLERQLQQRLPGLATVDPSLLTAGVFANALRTDGTEAAFALGDELF RVRSRTVQHDSARDLFDLLGRRERLVQWVPAEGSPGGAPASQWWDLDDRPRSGDRLLCLELASTLETRPPRRHRLRAAMA PWLHRLDNLREMVQRSVRRRDPLLLWGCGLLLLALIAGSSAFGSGSAMGGLLLTLALLKGEFLDSVGFLVEDNPMATDNL ALAYLSLLYAVVGTFLTAWLVAVILDRLLAQRLGRRQPRPLPAGSQYVLLLEGGRLAERLASLLQLQKFKVVRVEPDGTG MAYTQLDQAQRALRRSSCQAVGVLGADLVDNLDTALELQERWPGVRLAVQAQSLADGAKLSGLFSDMQVINPLQVAADAV VATAFGERVRGVLRLAEDNLLLTDYRIEPGDTLVGLSLAAVSGGYGLIPLQVTPLGQRKPIVLPNLERVLQPGDALVVMA DLQALLAVENGTLAPPRWQLEVRGCRRNCNGFEAQVLLARYLAQAPGEVGRYLETAAGPQRTKPIYQAPGRLLQQGLTRL GVECSLVAAAQTPA
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71165; Mature: 71165
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCWTMDPRSGVILICGLGGLGQACLRTLIGFEAEIHCIDQRQPRWVDALLADQYGANLLI CCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEE GDMRSPQVLRMGRAADARAVLLLSHDSAINLEAALQVRLLNPKAQLVVRTNSRRNLERQL ECCCCCHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCEEEEEECCCCCCHHHHH QQRLPGLATVDPSLLTAGVFANALRTDGTEAAFALGDELFRVRSRTVQHDSARDLFDLLG HHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC RRERLVQWVPAEGSPGGAPASQWWDLDDRPRSGDRLLCLELASTLETRPPRRHRLRAAMA CHHHHHEEECCCCCCCCCCCHHCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHH PWLHRLDNLREMVQRSVRRRDPLLLWGCGLLLLALIAGSSAFGSGSAMGGLLLTLALLKG HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH EFLDSVGFLVEDNPMATDNLALAYLSLLYAVVGTFLTAWLVAVILDRLLAQRLGRRQPRP HHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LPAGSQYVLLLEGGRLAERLASLLQLQKFKVVRVEPDGTGMAYTQLDQAQRALRRSSCQA CCCCCCEEEEEECCHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCE VGVLGADLVDNLDTALELQERWPGVRLAVQAQSLADGAKLSGLFSDMQVINPLQVAADAV EEEECHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHHHCHHHHHHHHH VATAFGERVRGVLRLAEDNLLLTDYRIEPGDTLVGLSLAAVSGGYGLIPLQVTPLGQRKP HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEHEEECCCCEEEEEEEECCCCCCC IVLPNLERVLQPGDALVVMADLQALLAVENGTLAPPRWQLEVRGCRRNCNGFEAQVLLAR EECCCHHHHHCCCCEEEEHHHHHHHHEECCCCCCCCCEEEEEEHHCCCCCCHHHHHHHHH YLAQAPGEVGRYLETAAGPQRTKPIYQAPGRLLQQGLTRLGVECSLVAAAQTPA HHHHCCHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHHHHCCCEEEEECCCCCC >Mature Secondary Structure MCWTMDPRSGVILICGLGGLGQACLRTLIGFEAEIHCIDQRQPRWVDALLADQYGANLLI CCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEE GDMRSPQVLRMGRAADARAVLLLSHDSAINLEAALQVRLLNPKAQLVVRTNSRRNLERQL ECCCCCHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCEEEEEECCCCCCHHHHH QQRLPGLATVDPSLLTAGVFANALRTDGTEAAFALGDELFRVRSRTVQHDSARDLFDLLG HHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC RRERLVQWVPAEGSPGGAPASQWWDLDDRPRSGDRLLCLELASTLETRPPRRHRLRAAMA CHHHHHEEECCCCCCCCCCCHHCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHH PWLHRLDNLREMVQRSVRRRDPLLLWGCGLLLLALIAGSSAFGSGSAMGGLLLTLALLKG HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH EFLDSVGFLVEDNPMATDNLALAYLSLLYAVVGTFLTAWLVAVILDRLLAQRLGRRQPRP HHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LPAGSQYVLLLEGGRLAERLASLLQLQKFKVVRVEPDGTGMAYTQLDQAQRALRRSSCQA CCCCCCEEEEEECCHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCE VGVLGADLVDNLDTALELQERWPGVRLAVQAQSLADGAKLSGLFSDMQVINPLQVAADAV EEEECHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHHHCHHHHHHHHH VATAFGERVRGVLRLAEDNLLLTDYRIEPGDTLVGLSLAAVSGGYGLIPLQVTPLGQRKP HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEHEEECCCCEEEEEEEECCCCCCC IVLPNLERVLQPGDALVVMADLQALLAVENGTLAPPRWQLEVRGCRRNCNGFEAQVLLAR EECCCHHHHHCCCCEEEEHHHHHHHHEECCCCCCCCCEEEEEEHHCCCCCCHHHHHHHHH YLAQAPGEVGRYLETAAGPQRTKPIYQAPGRLLQQGLTRLGVECSLVAAAQTPA HHHHCCHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA