| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241690
Identifier: 148241690
GI number: 148241690
Start: 525536
End: 526714
Strand: Direct
Name: 148241690
Synonym: SynRCC307_0591
Alternate gene names: NA
Gene position: 525536-526714 (Clockwise)
Preceding gene: 148241687
Following gene: 148241691
Centisome position: 23.62
GC content: 62.6
Gene sequence:
>1179_bases ATGGCCCTGTTCCCCTTCCCCACTGCCCTGGTGCATGAGTGGTTTAGCCCGCGCTCGGTGGGTGGGGCTGAGTTGGTGGT GCAGCAACTTGATCAGCTGTTAGATCCGCAGCTGTTTTCCTTGGTGGATGGCGAGAGCGGCCGGCCCCAGAGCTGGTTGG CGGGCCGCCAGATCGAAACCTCCTTCATCCAAAAGCTGCCCTGGGGCCGCAGCCATGTGCAGCAGTACTTACCGCTCTTG CCCTTAGCGATTGAGCAGCTGGACCTCTCGGGCTATCCGCTGGTGCTGAGCAGCAGCCATTTGGTGGCTAAGGGCGTGCT CACGTCGCCTGAGCAGCTGCATGTGAGCTACGTGCACACCCCCGTGCGTTACGCCTGGGATCAGATGCATGCTTATTTGC GCAGCTCGCGCTTGGCTCAAAGCCCCCTGGGGCCATGGATCCGTTGGCAGCTGCACCAGTTGCGCCAATGGGATGTGCTC AGTGCCAGTCGGCCGGATCGCTTGATTGCCAATTCCCGTTTTACGGCCCAGCGCATTGCCCGTTACTGGGGCCGGAGCTC CACGGTGTTGCCGCCACCAGTGGATGTGGAGCGCTTCGATTGGCAACAACCCCGGGAAGATTTTTATCTCTCGGTCTGTC GATTGGTTCCCTACAAGCGCGTGGATCTGGTGGTGCAGGCCTGCCGGGAGCTGGATCTGCCCTTGGTGGTGGTGGGCGAT GGACCAGAACGCTCGCGGCTGGAGGCCATGGCTGGCCCGTCAACGCGGTTCCTAGGTCGCTCGTCGGCGCACGAGGTGGA GCAGCTCTTGGCCCGCTGCCGCGCTTACGTCTATGCCGGTTTGGAGGATTTCGGCATTGCTCCAGTAGAGGCCATGGCCT CTGGGGCACCGGTGGTGGGGTTGGGGCGCGGCGGCCTGCTGGATTCGGTGCGTTGCCTCAGCCAAGAGCCGGCTCAGGCC ACGGGGCTGCTGTTTGCGGAACAGCAGCTCGGCGCTGTGAAAGCGGCACTGGAGTCCTTTGAAAGCAATGGGCTCTGGCG GCAGCTGCCGGCTGAGCGGCTGCGACTGCATGCCAAGGGATTCTCTGAAGAATCCTTCCGGCAACGTTTAAGCTCGCTGC TCATTGATTGGGTCAACCAACACGGGATCGGTTCCCACTCCGCTGTGCCTGTGGGGTAG
Upstream 100 bases:
>100_bases TAGTGCCATCGTCCCCACAACGTGGCATCAGCCTGCTGGCCTGCTTTGGAGGCGGCAAGCAAGCTTCAGAACTTGTATCT AACCCGGATAGGCTCCGGCC
Downstream 100 bases:
>100_bases GTGATCCAGATCCGGTGGGATTGTCACATGACAGTCCGTACGGTGCAGTCAGGTCTGTTTACGCGATGCTTTCAAGACCA GCCAGCCTTCTGAATACAGG
Product: glycosyltransferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Mannosyltransferase; Glycosyl Transferase Group 1 Protein; First Mannosyl Transferase; Mannosyl Transferase; Glycosyltransferase Protein; Glycosyl Transferase Group 1 Family; Glycosyltransferase Group 1 Family Protein; Lipopolysaccharide Biosynthesys-Related Glycosyltransferase; First Mannosyl Transferase WbaZ; Group 1 Family Glycosyltransferase; Glycosyltransferase Family 4 Domain Protein; First Mannosyl Transferase O- Antigen Biosynthesis; Aldehyde Dehydrogenase; Glycosyl Transferase Family Protein; Mannose-1-Phosphate Guanylyltransferase
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MALFPFPTALVHEWFSPRSVGGAELVVQQLDQLLDPQLFSLVDGESGRPQSWLAGRQIETSFIQKLPWGRSHVQQYLPLL PLAIEQLDLSGYPLVLSSSHLVAKGVLTSPEQLHVSYVHTPVRYAWDQMHAYLRSSRLAQSPLGPWIRWQLHQLRQWDVL SASRPDRLIANSRFTAQRIARYWGRSSTVLPPPVDVERFDWQQPREDFYLSVCRLVPYKRVDLVVQACRELDLPLVVVGD GPERSRLEAMAGPSTRFLGRSSAHEVEQLLARCRAYVYAGLEDFGIAPVEAMASGAPVVGLGRGGLLDSVRCLSQEPAQA TGLLFAEQQLGAVKAALESFESNGLWRQLPAERLRLHAKGFSEESFRQRLSSLLIDWVNQHGIGSHSAVPVG
Sequences:
>Translated_392_residues MALFPFPTALVHEWFSPRSVGGAELVVQQLDQLLDPQLFSLVDGESGRPQSWLAGRQIETSFIQKLPWGRSHVQQYLPLL PLAIEQLDLSGYPLVLSSSHLVAKGVLTSPEQLHVSYVHTPVRYAWDQMHAYLRSSRLAQSPLGPWIRWQLHQLRQWDVL SASRPDRLIANSRFTAQRIARYWGRSSTVLPPPVDVERFDWQQPREDFYLSVCRLVPYKRVDLVVQACRELDLPLVVVGD GPERSRLEAMAGPSTRFLGRSSAHEVEQLLARCRAYVYAGLEDFGIAPVEAMASGAPVVGLGRGGLLDSVRCLSQEPAQA TGLLFAEQQLGAVKAALESFESNGLWRQLPAERLRLHAKGFSEESFRQRLSSLLIDWVNQHGIGSHSAVPVG >Mature_391_residues ALFPFPTALVHEWFSPRSVGGAELVVQQLDQLLDPQLFSLVDGESGRPQSWLAGRQIETSFIQKLPWGRSHVQQYLPLLP LAIEQLDLSGYPLVLSSSHLVAKGVLTSPEQLHVSYVHTPVRYAWDQMHAYLRSSRLAQSPLGPWIRWQLHQLRQWDVLS ASRPDRLIANSRFTAQRIARYWGRSSTVLPPPVDVERFDWQQPREDFYLSVCRLVPYKRVDLVVQACRELDLPLVVVGDG PERSRLEAMAGPSTRFLGRSSAHEVEQLLARCRAYVYAGLEDFGIAPVEAMASGAPVVGLGRGGLLDSVRCLSQEPAQAT GLLFAEQQLGAVKAALESFESNGLWRQLPAERLRLHAKGFSEESFRQRLSSLLIDWVNQHGIGSHSAVPVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43821; Mature: 43689
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFPFPTALVHEWFSPRSVGGAELVVQQLDQLLDPQLFSLVDGESGRPQSWLAGRQIET CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHCCCHHHH SFIQKLPWGRSHVQQYLPLLPLAIEQLDLSGYPLVLSSSHLVAKGVLTSPEQLHVSYVHT HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCHHHEEEHHHHH PVRYAWDQMHAYLRSSRLAQSPLGPWIRWQLHQLRQWDVLSASRPDRLIANSRFTAQRIA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHH RYWGRSSTVLPPPVDVERFDWQQPREDFYLSVCRLVPYKRVDLVVQACRELDLPLVVVGD HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECC GPERSRLEAMAGPSTRFLGRSSAHEVEQLLARCRAYVYAGLEDFGIAPVEAMASGAPVVG CCCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHCCCCEEE LGRGGLLDSVRCLSQEPAQATGLLFAEQQLGAVKAALESFESNGLWRQLPAERLRLHAKG CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHCC FSEESFRQRLSSLLIDWVNQHGIGSHSAVPVG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ALFPFPTALVHEWFSPRSVGGAELVVQQLDQLLDPQLFSLVDGESGRPQSWLAGRQIET CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHCCCHHHH SFIQKLPWGRSHVQQYLPLLPLAIEQLDLSGYPLVLSSSHLVAKGVLTSPEQLHVSYVHT HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCHHHEEEHHHHH PVRYAWDQMHAYLRSSRLAQSPLGPWIRWQLHQLRQWDVLSASRPDRLIANSRFTAQRIA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHH RYWGRSSTVLPPPVDVERFDWQQPREDFYLSVCRLVPYKRVDLVVQACRELDLPLVVVGD HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECC GPERSRLEAMAGPSTRFLGRSSAHEVEQLLARCRAYVYAGLEDFGIAPVEAMASGAPVVG CCCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHCCCCEEE LGRGGLLDSVRCLSQEPAQATGLLFAEQQLGAVKAALESFESNGLWRQLPAERLRLHAKG CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHCC FSEESFRQRLSSLLIDWVNQHGIGSHSAVPVG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA