| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241687
Identifier: 148241687
GI number: 148241687
Start: 523728
End: 524624
Strand: Direct
Name: 148241687
Synonym: SynRCC307_0588
Alternate gene names: NA
Gene position: 523728-524624 (Clockwise)
Preceding gene: 148241686
Following gene: 148241690
Centisome position: 23.54
GC content: 44.48
Gene sequence:
>897_bases ATGCCTTATTCTCCCAACCCCAGATCCCAAGCAGCCTTCTTTAGGAGATCTTTCAAGGCCCTTTTGGCTTGTGCTTCTGC CGCTGCGTTGTCTGTCACAGCTGCTAAGGCACAAGAAGACGAATTAAATGTTGTATGTCCTCCCACAGATACAAGGCCAA ATTTAGGCGTAGTGGCCACGTCTGAAGCGTATTGTGCTGGAACGCCTGAAAAGTATCAACTCATTATTTATGAGATGGGT CTATGCACTTCTAATCCAACTTCTTCTAACGTATTGGATCAGTCTTCCTGTACGCCAACATTTAGATCTGAAGGTGGTAC TACTGTGAACTTGGCTGGTGGTGCGGTCATTGATCTTGGGTCAAGCGAAGAATCTGATCTGGGGAGGCCTGAGGACAACT CTTATTCATACGCCTACATTATTATTTCTAATAGATTTGTCTTGAGGGCTAAGTGGGGGAATACAGATGGAATTACTTAT TATTCAAATCCTGGCGGATTGAATAATGTCAGTTTATCTCCTCCCGCTCTTGACTTTGTTGAGGATCTGTCAAGCTTTGA TGAAGGGTTTGATCCGGTTTACCCGCCTATTATTGTTAGAGGCGGTACATTGGCTGCTTTGCTATTGAAATCTGATTTAA CTCCAGCATCCAATGGATTAGAGGTTGGAAGACTGGTGGGAACTTTTAAGCCTCAAGCCAGCTTAGTGATTGATGAAGCA GTTAAAGGTCTGAAGGTCGAGCTCACTGTTTCGAATAGCGGTTTGACCGTTGGAGTCGGCGAAAATCCTGGCGACTTTAA TGGTCCTCCAAGTGATCCTCGTGCTTTTAATTGCTATCAGCAGCCTTGTAGTTATGGGTCAGGTCCTTTTCAGCCAACAT TCACCTTGATTAAGTAA
Upstream 100 bases:
>100_bases AGCAGAAAAAGACTATTGGTGGTGTGAATGGATCATTCATCAATCAAGCTGCTGGTATCTAAACTTTTTTCTTTGACCAG CCTCGTCGCGTCTTAAATTC
Downstream 100 bases:
>100_bases ATCTCAGGAGGTAGGCTAATTTCAAGAATATTGGCATGTTTGCTCTCCTTGTTTATAGCAAGTTTTTTGTTTGCTCTTGT TTAATTTTTTTGGTTCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MPYSPNPRSQAAFFRRSFKALLACASAAALSVTAAKAQEDELNVVCPPTDTRPNLGVVATSEAYCAGTPEKYQLIIYEMG LCTSNPTSSNVLDQSSCTPTFRSEGGTTVNLAGGAVIDLGSSEESDLGRPEDNSYSYAYIIISNRFVLRAKWGNTDGITY YSNPGGLNNVSLSPPALDFVEDLSSFDEGFDPVYPPIIVRGGTLAALLLKSDLTPASNGLEVGRLVGTFKPQASLVIDEA VKGLKVELTVSNSGLTVGVGENPGDFNGPPSDPRAFNCYQQPCSYGSGPFQPTFTLIK
Sequences:
>Translated_298_residues MPYSPNPRSQAAFFRRSFKALLACASAAALSVTAAKAQEDELNVVCPPTDTRPNLGVVATSEAYCAGTPEKYQLIIYEMG LCTSNPTSSNVLDQSSCTPTFRSEGGTTVNLAGGAVIDLGSSEESDLGRPEDNSYSYAYIIISNRFVLRAKWGNTDGITY YSNPGGLNNVSLSPPALDFVEDLSSFDEGFDPVYPPIIVRGGTLAALLLKSDLTPASNGLEVGRLVGTFKPQASLVIDEA VKGLKVELTVSNSGLTVGVGENPGDFNGPPSDPRAFNCYQQPCSYGSGPFQPTFTLIK >Mature_297_residues PYSPNPRSQAAFFRRSFKALLACASAAALSVTAAKAQEDELNVVCPPTDTRPNLGVVATSEAYCAGTPEKYQLIIYEMGL CTSNPTSSNVLDQSSCTPTFRSEGGTTVNLAGGAVIDLGSSEESDLGRPEDNSYSYAYIIISNRFVLRAKWGNTDGITYY SNPGGLNNVSLSPPALDFVEDLSSFDEGFDPVYPPIIVRGGTLAALLLKSDLTPASNGLEVGRLVGTFKPQASLVIDEAV KGLKVELTVSNSGLTVGVGENPGDFNGPPSDPRAFNCYQQPCSYGSGPFQPTFTLIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31521; Mature: 31390
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYSPNPRSQAAFFRRSFKALLACASAAALSVTAAKAQEDELNVVCPPTDTRPNLGVVAT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCCCCEEEE SEAYCAGTPEKYQLIIYEMGLCTSNPTSSNVLDQSSCTPTFRSEGGTTVNLAGGAVIDLG CCCEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCEEEECC SSEESDLGRPEDNSYSYAYIIISNRFVLRAKWGNTDGITYYSNPGGLNNVSLSPPALDFV CCCCCCCCCCCCCCEEEEEEEEECEEEEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHH EDLSSFDEGFDPVYPPIIVRGGTLAALLLKSDLTPASNGLEVGRLVGTFKPQASLVIDEA HHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEHHHHCCCCCCHHEEEHHH VKGLKVELTVSNSGLTVGVGENPGDFNGPPSDPRAFNCYQQPCSYGSGPFQPTFTLIK HCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCEEEEEC >Mature Secondary Structure PYSPNPRSQAAFFRRSFKALLACASAAALSVTAAKAQEDELNVVCPPTDTRPNLGVVAT CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCCCCEEEE SEAYCAGTPEKYQLIIYEMGLCTSNPTSSNVLDQSSCTPTFRSEGGTTVNLAGGAVIDLG CCCEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCEEEECC SSEESDLGRPEDNSYSYAYIIISNRFVLRAKWGNTDGITYYSNPGGLNNVSLSPPALDFV CCCCCCCCCCCCCCEEEEEEEEECEEEEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHH EDLSSFDEGFDPVYPPIIVRGGTLAALLLKSDLTPASNGLEVGRLVGTFKPQASLVIDEA HHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEHHHHCCCCCCHHEEEHHH VKGLKVELTVSNSGLTVGVGENPGDFNGPPSDPRAFNCYQQPCSYGSGPFQPTFTLIK HCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA