Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241687

Identifier: 148241687

GI number: 148241687

Start: 523728

End: 524624

Strand: Direct

Name: 148241687

Synonym: SynRCC307_0588

Alternate gene names: NA

Gene position: 523728-524624 (Clockwise)

Preceding gene: 148241686

Following gene: 148241690

Centisome position: 23.54

GC content: 44.48

Gene sequence:

>897_bases
ATGCCTTATTCTCCCAACCCCAGATCCCAAGCAGCCTTCTTTAGGAGATCTTTCAAGGCCCTTTTGGCTTGTGCTTCTGC
CGCTGCGTTGTCTGTCACAGCTGCTAAGGCACAAGAAGACGAATTAAATGTTGTATGTCCTCCCACAGATACAAGGCCAA
ATTTAGGCGTAGTGGCCACGTCTGAAGCGTATTGTGCTGGAACGCCTGAAAAGTATCAACTCATTATTTATGAGATGGGT
CTATGCACTTCTAATCCAACTTCTTCTAACGTATTGGATCAGTCTTCCTGTACGCCAACATTTAGATCTGAAGGTGGTAC
TACTGTGAACTTGGCTGGTGGTGCGGTCATTGATCTTGGGTCAAGCGAAGAATCTGATCTGGGGAGGCCTGAGGACAACT
CTTATTCATACGCCTACATTATTATTTCTAATAGATTTGTCTTGAGGGCTAAGTGGGGGAATACAGATGGAATTACTTAT
TATTCAAATCCTGGCGGATTGAATAATGTCAGTTTATCTCCTCCCGCTCTTGACTTTGTTGAGGATCTGTCAAGCTTTGA
TGAAGGGTTTGATCCGGTTTACCCGCCTATTATTGTTAGAGGCGGTACATTGGCTGCTTTGCTATTGAAATCTGATTTAA
CTCCAGCATCCAATGGATTAGAGGTTGGAAGACTGGTGGGAACTTTTAAGCCTCAAGCCAGCTTAGTGATTGATGAAGCA
GTTAAAGGTCTGAAGGTCGAGCTCACTGTTTCGAATAGCGGTTTGACCGTTGGAGTCGGCGAAAATCCTGGCGACTTTAA
TGGTCCTCCAAGTGATCCTCGTGCTTTTAATTGCTATCAGCAGCCTTGTAGTTATGGGTCAGGTCCTTTTCAGCCAACAT
TCACCTTGATTAAGTAA

Upstream 100 bases:

>100_bases
AGCAGAAAAAGACTATTGGTGGTGTGAATGGATCATTCATCAATCAAGCTGCTGGTATCTAAACTTTTTTCTTTGACCAG
CCTCGTCGCGTCTTAAATTC

Downstream 100 bases:

>100_bases
ATCTCAGGAGGTAGGCTAATTTCAAGAATATTGGCATGTTTGCTCTCCTTGTTTATAGCAAGTTTTTTGTTTGCTCTTGT
TTAATTTTTTTGGTTCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MPYSPNPRSQAAFFRRSFKALLACASAAALSVTAAKAQEDELNVVCPPTDTRPNLGVVATSEAYCAGTPEKYQLIIYEMG
LCTSNPTSSNVLDQSSCTPTFRSEGGTTVNLAGGAVIDLGSSEESDLGRPEDNSYSYAYIIISNRFVLRAKWGNTDGITY
YSNPGGLNNVSLSPPALDFVEDLSSFDEGFDPVYPPIIVRGGTLAALLLKSDLTPASNGLEVGRLVGTFKPQASLVIDEA
VKGLKVELTVSNSGLTVGVGENPGDFNGPPSDPRAFNCYQQPCSYGSGPFQPTFTLIK

Sequences:

>Translated_298_residues
MPYSPNPRSQAAFFRRSFKALLACASAAALSVTAAKAQEDELNVVCPPTDTRPNLGVVATSEAYCAGTPEKYQLIIYEMG
LCTSNPTSSNVLDQSSCTPTFRSEGGTTVNLAGGAVIDLGSSEESDLGRPEDNSYSYAYIIISNRFVLRAKWGNTDGITY
YSNPGGLNNVSLSPPALDFVEDLSSFDEGFDPVYPPIIVRGGTLAALLLKSDLTPASNGLEVGRLVGTFKPQASLVIDEA
VKGLKVELTVSNSGLTVGVGENPGDFNGPPSDPRAFNCYQQPCSYGSGPFQPTFTLIK
>Mature_297_residues
PYSPNPRSQAAFFRRSFKALLACASAAALSVTAAKAQEDELNVVCPPTDTRPNLGVVATSEAYCAGTPEKYQLIIYEMGL
CTSNPTSSNVLDQSSCTPTFRSEGGTTVNLAGGAVIDLGSSEESDLGRPEDNSYSYAYIIISNRFVLRAKWGNTDGITYY
SNPGGLNNVSLSPPALDFVEDLSSFDEGFDPVYPPIIVRGGTLAALLLKSDLTPASNGLEVGRLVGTFKPQASLVIDEAV
KGLKVELTVSNSGLTVGVGENPGDFNGPPSDPRAFNCYQQPCSYGSGPFQPTFTLIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31521; Mature: 31390

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYSPNPRSQAAFFRRSFKALLACASAAALSVTAAKAQEDELNVVCPPTDTRPNLGVVAT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCCCCEEEE
SEAYCAGTPEKYQLIIYEMGLCTSNPTSSNVLDQSSCTPTFRSEGGTTVNLAGGAVIDLG
CCCEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCEEEECC
SSEESDLGRPEDNSYSYAYIIISNRFVLRAKWGNTDGITYYSNPGGLNNVSLSPPALDFV
CCCCCCCCCCCCCCEEEEEEEEECEEEEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHH
EDLSSFDEGFDPVYPPIIVRGGTLAALLLKSDLTPASNGLEVGRLVGTFKPQASLVIDEA
HHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEHHHHCCCCCCHHEEEHHH
VKGLKVELTVSNSGLTVGVGENPGDFNGPPSDPRAFNCYQQPCSYGSGPFQPTFTLIK
HCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
PYSPNPRSQAAFFRRSFKALLACASAAALSVTAAKAQEDELNVVCPPTDTRPNLGVVAT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCCCCEEEE
SEAYCAGTPEKYQLIIYEMGLCTSNPTSSNVLDQSSCTPTFRSEGGTTVNLAGGAVIDLG
CCCEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCEEEECC
SSEESDLGRPEDNSYSYAYIIISNRFVLRAKWGNTDGITYYSNPGGLNNVSLSPPALDFV
CCCCCCCCCCCCCCEEEEEEEEECEEEEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHH
EDLSSFDEGFDPVYPPIIVRGGTLAALLLKSDLTPASNGLEVGRLVGTFKPQASLVIDEA
HHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEHHHHCCCCCCHHEEEHHH
VKGLKVELTVSNSGLTVGVGENPGDFNGPPSDPRAFNCYQQPCSYGSGPFQPTFTLIK
HCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA