| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241574
Identifier: 148241574
GI number: 148241574
Start: 441915
End: 442175
Strand: Direct
Name: 148241574
Synonym: SynRCC307_0475
Alternate gene names: NA
Gene position: 441915-442175 (Clockwise)
Preceding gene: 148241573
Following gene: 148241579
Centisome position: 19.86
GC content: 60.54
Gene sequence:
>261_bases ATGACCTATTTCCGTCGCCGTGAGCTCATGCCTCAGGGGATCTCCCCCTCGATGCAGCGCCTAGTTAGGCGCAAGCTCAG TCGTGTGCTTGGCGGTCAGGCCCAGGTGATCAGCCTCAAGGAGATCAAACGCAAAGGCGAGTGGCAGGGCTATTGCGAGG TGGAAGGGCGTTTGGCCCAGTTCCGCTTCATTCGTGGGGGGCGTCAGCTGGTGGTGCAGCCTCTTTTAAACGTGTTCCGC TGGGACCGATCCGCGTCGTGA
Upstream 100 bases:
>100_bases TGCGCGATGTGTTCCTCACTGCAGTGTGACAGCGGCGCTGATGGGCACCGAGAACACGAAGAGATTGTGGGGCTCTGCCA AAGCAGGGCTGAGCCCCTCT
Downstream 100 bases:
>100_bases GCTGTTCGTTCAAGGCGTTGGCGTCAAACAGCATCGGCAGGAAATGGATGCTCTTCACTTCACGGAAATAGAAGAGCACC GGCACCATTGGCCAAAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MTYFRRRELMPQGISPSMQRLVRRKLSRVLGGQAQVISLKEIKRKGEWQGYCEVEGRLAQFRFIRGGRQLVVQPLLNVFR WDRSAS
Sequences:
>Translated_86_residues MTYFRRRELMPQGISPSMQRLVRRKLSRVLGGQAQVISLKEIKRKGEWQGYCEVEGRLAQFRFIRGGRQLVVQPLLNVFR WDRSAS >Mature_85_residues TYFRRRELMPQGISPSMQRLVRRKLSRVLGGQAQVISLKEIKRKGEWQGYCEVEGRLAQFRFIRGGRQLVVQPLLNVFRW DRSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10151; Mature: 10020
Theoretical pI: Translated: 12.13; Mature: 12.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYFRRRELMPQGISPSMQRLVRRKLSRVLGGQAQVISLKEIKRKGEWQGYCEVEGRLAQ CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCHHHHHHHHH FRFIRGGRQLVVQPLLNVFRWDRSAS HHHHHCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TYFRRRELMPQGISPSMQRLVRRKLSRVLGGQAQVISLKEIKRKGEWQGYCEVEGRLAQ CCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCHHHHHHHHH FRFIRGGRQLVVQPLLNVFRWDRSAS HHHHHCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA