| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241579
Identifier: 148241579
GI number: 148241579
Start: 446873
End: 447514
Strand: Direct
Name: 148241579
Synonym: SynRCC307_0480
Alternate gene names: NA
Gene position: 446873-447514 (Clockwise)
Preceding gene: 148241574
Following gene: 148241580
Centisome position: 20.08
GC content: 64.02
Gene sequence:
>642_bases ATGGATGGGATGGGTATCGCAGCGCTGGGTTCTGGTCTGTGGGCATTTCCCCCCAGTCGCGACAGCGACGGCGGTACGGC CTGGCTGTTCCACAGCCAAAGCGGCGCTTCGGTGCTCGTGGATGTGCCGCTGCTCAGTGATGAGCATCTGAGCTGGCTGC AGCAACAGCCCCGCGGCTGGATCGTGCTCACCCATCGCCAAGGCCATGGCCGCTGCCGGCGTTTACAGGAACAGCTGGGG TGGCCTGTGCTGGTGCAAGAGCAGGAGGCTTATCTGTTGCCCACGCTGCAGCAGCGCCACAGCTTTGGTGAGCAGCGGGA GCTTGAGCCGGGCTTGCAGCTGCTCTGGACACCGGGGCCAACCCCTGGATCCTGCTGTTTGCATTGGTCCCAAGGGAGGC GGGATGTGTTGTTCTGCGGACGTTTGCTGTGGCCGCGTGGCCTCGAGGATGTCGAAATGCGAATTGGCGACAGCACCTTT CATGCCACCCGCCAGCAGCGCAGTGTGGGGCGGCTGAGGACCTGGCTGGATGCGGGGCAACCTGCCCAGATCGCTTGCGC CGCAGGGCTTGGCGTGTTGCGTGGCGCCAAGCTTGTTGAGCGCGGCAGTGTCGCCATCGATACATTGATCGCTCGCAACT GA
Upstream 100 bases:
>100_bases ACCGCCTACCAGTGAGCTGCCCAGGGGCCATGGCTTGCCGATGCTCACCGCCATGGCTGGGCTGTTCCTGTGCGCGTGCC TATTCAGAGGATGGCGTGAA
Downstream 100 bases:
>100_bases GCAATCAACCGCTCAAACCCATTGCAAAGGCTGGGTTGGTTAGTTGCGTTCTCGAAAAGTGCTCCATACAGTTGGCGCGT TCCTACTCCTCGCAGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MDGMGIAALGSGLWAFPPSRDSDGGTAWLFHSQSGASVLVDVPLLSDEHLSWLQQQPRGWIVLTHRQGHGRCRRLQEQLG WPVLVQEQEAYLLPTLQQRHSFGEQRELEPGLQLLWTPGPTPGSCCLHWSQGRRDVLFCGRLLWPRGLEDVEMRIGDSTF HATRQQRSVGRLRTWLDAGQPAQIACAAGLGVLRGAKLVERGSVAIDTLIARN
Sequences:
>Translated_213_residues MDGMGIAALGSGLWAFPPSRDSDGGTAWLFHSQSGASVLVDVPLLSDEHLSWLQQQPRGWIVLTHRQGHGRCRRLQEQLG WPVLVQEQEAYLLPTLQQRHSFGEQRELEPGLQLLWTPGPTPGSCCLHWSQGRRDVLFCGRLLWPRGLEDVEMRIGDSTF HATRQQRSVGRLRTWLDAGQPAQIACAAGLGVLRGAKLVERGSVAIDTLIARN >Mature_213_residues MDGMGIAALGSGLWAFPPSRDSDGGTAWLFHSQSGASVLVDVPLLSDEHLSWLQQQPRGWIVLTHRQGHGRCRRLQEQLG WPVLVQEQEAYLLPTLQQRHSFGEQRELEPGLQLLWTPGPTPGSCCLHWSQGRRDVLFCGRLLWPRGLEDVEMRIGDSTF HATRQQRSVGRLRTWLDAGQPAQIACAAGLGVLRGAKLVERGSVAIDTLIARN
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23627; Mature: 23627
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGMGIAALGSGLWAFPPSRDSDGGTAWLFHSQSGASVLVDVPLLSDEHLSWLQQQPRGW CCCCCCHHHCCCEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHCCCCE IVLTHRQGHGRCRRLQEQLGWPVLVQEQEAYLLPTLQQRHSFGEQRELEPGLQLLWTPGP EEEEECCCCHHHHHHHHHCCCCEEEECCCCEECCCHHHHHCCCCCCCCCCCCEEEECCCC TPGSCCLHWSQGRRDVLFCGRLLWPRGLEDVEMRIGDSTFHATRQQRSVGRLRTWLDAGQ CCCCEEEECCCCCEEEEHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC PAQIACAAGLGVLRGAKLVERGSVAIDTLIARN CCEEEHHHHHHHHHHHHHHHCCCEEEHHEECCC >Mature Secondary Structure MDGMGIAALGSGLWAFPPSRDSDGGTAWLFHSQSGASVLVDVPLLSDEHLSWLQQQPRGW CCCCCCHHHCCCEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHCCCCE IVLTHRQGHGRCRRLQEQLGWPVLVQEQEAYLLPTLQQRHSFGEQRELEPGLQLLWTPGP EEEEECCCCHHHHHHHHHCCCCEEEECCCCEECCCHHHHHCCCCCCCCCCCCEEEECCCC TPGSCCLHWSQGRRDVLFCGRLLWPRGLEDVEMRIGDSTFHATRQQRSVGRLRTWLDAGQ CCCCEEEECCCCCEEEEHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC PAQIACAAGLGVLRGAKLVERGSVAIDTLIARN CCEEEHHHHHHHHHHHHHHHCCCEEEHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA