Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241579

Identifier: 148241579

GI number: 148241579

Start: 446873

End: 447514

Strand: Direct

Name: 148241579

Synonym: SynRCC307_0480

Alternate gene names: NA

Gene position: 446873-447514 (Clockwise)

Preceding gene: 148241574

Following gene: 148241580

Centisome position: 20.08

GC content: 64.02

Gene sequence:

>642_bases
ATGGATGGGATGGGTATCGCAGCGCTGGGTTCTGGTCTGTGGGCATTTCCCCCCAGTCGCGACAGCGACGGCGGTACGGC
CTGGCTGTTCCACAGCCAAAGCGGCGCTTCGGTGCTCGTGGATGTGCCGCTGCTCAGTGATGAGCATCTGAGCTGGCTGC
AGCAACAGCCCCGCGGCTGGATCGTGCTCACCCATCGCCAAGGCCATGGCCGCTGCCGGCGTTTACAGGAACAGCTGGGG
TGGCCTGTGCTGGTGCAAGAGCAGGAGGCTTATCTGTTGCCCACGCTGCAGCAGCGCCACAGCTTTGGTGAGCAGCGGGA
GCTTGAGCCGGGCTTGCAGCTGCTCTGGACACCGGGGCCAACCCCTGGATCCTGCTGTTTGCATTGGTCCCAAGGGAGGC
GGGATGTGTTGTTCTGCGGACGTTTGCTGTGGCCGCGTGGCCTCGAGGATGTCGAAATGCGAATTGGCGACAGCACCTTT
CATGCCACCCGCCAGCAGCGCAGTGTGGGGCGGCTGAGGACCTGGCTGGATGCGGGGCAACCTGCCCAGATCGCTTGCGC
CGCAGGGCTTGGCGTGTTGCGTGGCGCCAAGCTTGTTGAGCGCGGCAGTGTCGCCATCGATACATTGATCGCTCGCAACT
GA

Upstream 100 bases:

>100_bases
ACCGCCTACCAGTGAGCTGCCCAGGGGCCATGGCTTGCCGATGCTCACCGCCATGGCTGGGCTGTTCCTGTGCGCGTGCC
TATTCAGAGGATGGCGTGAA

Downstream 100 bases:

>100_bases
GCAATCAACCGCTCAAACCCATTGCAAAGGCTGGGTTGGTTAGTTGCGTTCTCGAAAAGTGCTCCATACAGTTGGCGCGT
TCCTACTCCTCGCAGCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MDGMGIAALGSGLWAFPPSRDSDGGTAWLFHSQSGASVLVDVPLLSDEHLSWLQQQPRGWIVLTHRQGHGRCRRLQEQLG
WPVLVQEQEAYLLPTLQQRHSFGEQRELEPGLQLLWTPGPTPGSCCLHWSQGRRDVLFCGRLLWPRGLEDVEMRIGDSTF
HATRQQRSVGRLRTWLDAGQPAQIACAAGLGVLRGAKLVERGSVAIDTLIARN

Sequences:

>Translated_213_residues
MDGMGIAALGSGLWAFPPSRDSDGGTAWLFHSQSGASVLVDVPLLSDEHLSWLQQQPRGWIVLTHRQGHGRCRRLQEQLG
WPVLVQEQEAYLLPTLQQRHSFGEQRELEPGLQLLWTPGPTPGSCCLHWSQGRRDVLFCGRLLWPRGLEDVEMRIGDSTF
HATRQQRSVGRLRTWLDAGQPAQIACAAGLGVLRGAKLVERGSVAIDTLIARN
>Mature_213_residues
MDGMGIAALGSGLWAFPPSRDSDGGTAWLFHSQSGASVLVDVPLLSDEHLSWLQQQPRGWIVLTHRQGHGRCRRLQEQLG
WPVLVQEQEAYLLPTLQQRHSFGEQRELEPGLQLLWTPGPTPGSCCLHWSQGRRDVLFCGRLLWPRGLEDVEMRIGDSTF
HATRQQRSVGRLRTWLDAGQPAQIACAAGLGVLRGAKLVERGSVAIDTLIARN

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23627; Mature: 23627

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGMGIAALGSGLWAFPPSRDSDGGTAWLFHSQSGASVLVDVPLLSDEHLSWLQQQPRGW
CCCCCCHHHCCCEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHCCCCE
IVLTHRQGHGRCRRLQEQLGWPVLVQEQEAYLLPTLQQRHSFGEQRELEPGLQLLWTPGP
EEEEECCCCHHHHHHHHHCCCCEEEECCCCEECCCHHHHHCCCCCCCCCCCCEEEECCCC
TPGSCCLHWSQGRRDVLFCGRLLWPRGLEDVEMRIGDSTFHATRQQRSVGRLRTWLDAGQ
CCCCEEEECCCCCEEEEHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
PAQIACAAGLGVLRGAKLVERGSVAIDTLIARN
CCEEEHHHHHHHHHHHHHHHCCCEEEHHEECCC
>Mature Secondary Structure
MDGMGIAALGSGLWAFPPSRDSDGGTAWLFHSQSGASVLVDVPLLSDEHLSWLQQQPRGW
CCCCCCHHHCCCEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHCCCCE
IVLTHRQGHGRCRRLQEQLGWPVLVQEQEAYLLPTLQQRHSFGEQRELEPGLQLLWTPGP
EEEEECCCCHHHHHHHHHCCCCEEEECCCCEECCCHHHHHCCCCCCCCCCCCEEEECCCC
TPGSCCLHWSQGRRDVLFCGRLLWPRGLEDVEMRIGDSTFHATRQQRSVGRLRTWLDAGQ
CCCCEEEECCCCCEEEEHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
PAQIACAAGLGVLRGAKLVERGSVAIDTLIARN
CCEEEHHHHHHHHHHHHHHHCCCEEEHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA