| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is chrA
Identifier: 148241538
GI number: 148241538
Start: 414194
End: 414772
Strand: Direct
Name: chrA
Synonym: SynRCC307_0439
Alternate gene names: NA
Gene position: 414194-414772 (Clockwise)
Preceding gene: 148241537
Following gene: 148241539
Centisome position: 18.62
GC content: 63.39
Gene sequence:
>579_bases GTGATGGCAGCTCAGCTGGATCAAGAACCGTTGGCTGCAGCCCCAAGCCGTAAGGGGTTGTTCCTGGGCATGTTGCAGGT GGCGCTGTCCTCCTTTGGTGGGGGCATGTCGGCCTGGAGTCAGCGCATCGTTGTTGAGCAGCGCCGCTGGATGAGCAACG AAAGCTTCATCACTGGCCTCACGGTGGCTCGTCTCTTCCCCGGCCCCAATCAAATCAACATGGCCGTCTACATCGGCGCG CAGTTCCGGGCGTTTGCTGGCGCGGTGGCGGCTGTGGGCGGGATTTTGCTCGTGCCCTTCAGCCTGTTGATGCTGATCGG GGTGGTGTATTTCCAGTTCCACGCGGCTCCAGCGGTGGACCGGGTGCTCACCGGGGTGGTGGCAGCGGCAGCGGGCATGG CCCTGTCCATGGGCTTCAAGATCCTGCACGTGTATTGGCGTGATCCGCTGGCCTTGGGGTTGGCGGCGCTCACCTTTGTG GTGCTGGAGTTCAAGGGGATTGGCCTGATCCCGGTGGTGCTGGTGTTGGGGCCGATTGCCATGGCCCTCTACTGGCCGCG GCAGCAGCGCCATGGTTGA
Upstream 100 bases:
>100_bases ACGACTGGAATGAAGCCACGCCCTACGCCGCACCGGATCCGTTGGATCCCGCGATGCATGAGGAGGGGGAGCTGCCTCCG GATCCCCACTTCATTCACGA
Downstream 100 bases:
>100_bases TCCCAGCAGCGCTTGGGACACCTGGCTTCAGGTGGTGTGGACCTTCCTGCGCCTGTCGCTGTTTTCCCTCGGCGGCGGCA ACACCTTGCTGGCGGAATAC
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MMAAQLDQEPLAAAPSRKGLFLGMLQVALSSFGGGMSAWSQRIVVEQRRWMSNESFITGLTVARLFPGPNQINMAVYIGA QFRAFAGAVAAVGGILLVPFSLLMLIGVVYFQFHAAPAVDRVLTGVVAAAAGMALSMGFKILHVYWRDPLALGLAALTFV VLEFKGIGLIPVVLVLGPIAMALYWPRQQRHG
Sequences:
>Translated_192_residues MMAAQLDQEPLAAAPSRKGLFLGMLQVALSSFGGGMSAWSQRIVVEQRRWMSNESFITGLTVARLFPGPNQINMAVYIGA QFRAFAGAVAAVGGILLVPFSLLMLIGVVYFQFHAAPAVDRVLTGVVAAAAGMALSMGFKILHVYWRDPLALGLAALTFV VLEFKGIGLIPVVLVLGPIAMALYWPRQQRHG >Mature_192_residues MMAAQLDQEPLAAAPSRKGLFLGMLQVALSSFGGGMSAWSQRIVVEQRRWMSNESFITGLTVARLFPGPNQINMAVYIGA QFRAFAGAVAAVGGILLVPFSLLMLIGVVYFQFHAAPAVDRVLTGVVAAAAGMALSMGFKILHVYWRDPLALGLAALTFV VLEFKGIGLIPVVLVLGPIAMALYWPRQQRHG
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 20571; Mature: 20571
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAAQLDQEPLAAAPSRKGLFLGMLQVALSSFGGGMSAWSQRIVVEQRRWMSNESFITGL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHH TVARLFPGPNQINMAVYIGAQFRAFAGAVAAVGGILLVPFSLLMLIGVVYFQFHAAPAVD HHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RVLTGVVAAAAGMALSMGFKILHVYWRDPLALGLAALTFVVLEFKGIGLIPVVLVLGPIA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH MALYWPRQQRHG HHHHCCHHHCCC >Mature Secondary Structure MMAAQLDQEPLAAAPSRKGLFLGMLQVALSSFGGGMSAWSQRIVVEQRRWMSNESFITGL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHH TVARLFPGPNQINMAVYIGAQFRAFAGAVAAVGGILLVPFSLLMLIGVVYFQFHAAPAVD HHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RVLTGVVAAAAGMALSMGFKILHVYWRDPLALGLAALTFVVLEFKGIGLIPVVLVLGPIA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH MALYWPRQQRHG HHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]