| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241502
Identifier: 148241502
GI number: 148241502
Start: 384688
End: 385017
Strand: Direct
Name: 148241502
Synonym: SynRCC307_0403
Alternate gene names: NA
Gene position: 384688-385017 (Clockwise)
Preceding gene: 148241499
Following gene: 148241504
Centisome position: 17.29
GC content: 60.3
Gene sequence:
>330_bases ATGGCACGCCGACTTTTGCTCACCAGCCTTGGGTGGTTCGCTTTGCTTGCAACACCGGCAATGGCCGCGCCTGAAACCTC TTGGGCTGAAGCGGTGCAGCAGGGGCGCGAGGCCTCGCAAGCGGTTCTGGGTCGCACGGGCACCGAAACCTGCCTGCAGG GAAAGATGATCAATGCCCTGATCGAGGTGTCCAATCGCTGTGATGAGGGTGATGGCAATCCCGAGCTCTGTGAGTTGGCG GAAGCCAACGTGCTCAGTGGTGTTCAGCCCCTCTCCGTCCTCGATCAGGTCTCCAGCGACTTTCTCAAGCTGACCTCTGC CCAGCCATAA
Upstream 100 bases:
>100_bases ACTCAGTGCTGGGTGAGGAAAGCGTCACGGCAAGCCGTAAGGGGGCTTCAACTTAAAGCGATTTTCTCACTAGCTTGGAT ATATACCTAACACCGCAGCA
Downstream 100 bases:
>100_bases GGCTTAGTTGAGTAGATCGAGAACGTTGATCTTGTTGTCGTTGGTTTTGTTCTCATCCAGCTCGCCATAAACCGGACGCG GGTCTTCTTTGCCCTTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MARRLLLTSLGWFALLATPAMAAPETSWAEAVQQGREASQAVLGRTGTETCLQGKMINALIEVSNRCDEGDGNPELCELA EANVLSGVQPLSVLDQVSSDFLKLTSAQP
Sequences:
>Translated_109_residues MARRLLLTSLGWFALLATPAMAAPETSWAEAVQQGREASQAVLGRTGTETCLQGKMINALIEVSNRCDEGDGNPELCELA EANVLSGVQPLSVLDQVSSDFLKLTSAQP >Mature_108_residues ARRLLLTSLGWFALLATPAMAAPETSWAEAVQQGREASQAVLGRTGTETCLQGKMINALIEVSNRCDEGDGNPELCELAE ANVLSGVQPLSVLDQVSSDFLKLTSAQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11560; Mature: 11429
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRLLLTSLGWFALLATPAMAAPETSWAEAVQQGREASQAVLGRTGTETCLQGKMINAL CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IEVSNRCDEGDGNPELCELAEANVLSGVQPLSVLDQVSSDFLKLTSAQP HHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ARRLLLTSLGWFALLATPAMAAPETSWAEAVQQGREASQAVLGRTGTETCLQGKMINAL CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IEVSNRCDEGDGNPELCELAEANVLSGVQPLSVLDQVSSDFLKLTSAQP HHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA