| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is chbG [H]
Identifier: 148241504
GI number: 148241504
Start: 385538
End: 386836
Strand: Direct
Name: chbG [H]
Synonym: SynRCC307_0405
Alternate gene names: 148241504
Gene position: 385538-386836 (Clockwise)
Preceding gene: 148241502
Following gene: 148241508
Centisome position: 17.33
GC content: 62.2
Gene sequence:
>1299_bases TTGGTCTTGCTGCAGACACTGATTCGCTACGCCCTGGTGGGCGGCGGTGCTGCAGCGATTCATCTGCTGCTGCTCCTGCT GCTGCCCCGCCTGGGGGCGCCATTGCCCCTGGCCAATGTGGCGGGCTATCTCACCGCATTGCTGTGGGGCTATGTCCTGC ATGCCGTGCTGACGTTTCGCCGGCAAACCTCAGGGGAATTGTTTCCGCGCCGTTGGTTGCTGCTGCAGCTGGTGATCAAC CTCAGCCTGAGTTTGGGCCTGCCCCAGCTGATGCCGCCGTTGGCAACCCATCCCGTTGGCATTGCCCTGCTGGTGTTCAC GCCAACGGCTGTGAATGCTTTGGTGTGGTGGCTGGCGGCCCATCAGGTGCAGCGGCTACGCCGCGGCGATGGGCTAGCGA CGTCGGCCCTGCAGTTCCATGCCGATGACCTCGGCCTTTGCGCAGCGGTCAATGCCTCGATCTTGGCGTTGGCGGACCGC GGGCTGTTGCAAGGCACCAGCGTGATGCTCAATGGCAGCGATCTGAGTGGGGCTGTGGCTGGATTGGCCCTGCGCCCCCA GCTGAATTTGGTGTTGCATTTGGTGCTGACCGAGGGGCTGCCGATTGCTGAGCAAGAGCAGGTCCCCGATCTGCTTAACG GGAGGGGTGAGCTTCAGCTCAAGGTGCATCGCTTGTTGTTGTTGTCGTTTTGGCCGCGGTCATGGGATTGGCCTCAATTG CGCAGGCAACGCCATCAATTGCGTCTGGAAGTGGATGCGCAGATCGATCGCTTTTGTTCGCTTTGGCCTGATCGCCCCCT GCAAGTCGATGGCCATCAGCATGTGCACCTGATGCCGGTCGTGTGGCGGCAGCTGATGGCGTCCCGTCCCCAGCACCCTT TGGCTTGGGTTCGCACGGTGCATGAACCGTTGCCAGTGGGACTGCCTCTTGGGGAGTGGTGGAGCGTGTTGCGGAGTGCT GGCTGGTTGAAATGGCTGCTGTTGCAGTCCCTCAGTGAGCTGCAGCGCCCTGATTTGGCGGCACGCGGCATTGCCACCAA CCAATGGTTTGCCGGGGTGCTGTGCACTGGGCGCATGGGTGATCGCGCCCTGCAGGCCTCACTTCGCAGCCTGCGGGCTT GTTTGTTGGGCCAGGAACATCAGCACGCGTTGGTCTTGCTGCATCCCTCTGAACCGCTCCAGAGCGACCGGGAGCTTGAG CGCTTTGCAGAATCGCAAGCCTTCTATCGCTCGCCTTGGCGCCAGCGTGAGGCTCAGGCCTTGCTGTCAAGAGCTGGGTG GATGTCGCGCACGAAATAG
Upstream 100 bases:
>100_bases TGCAGCGTTTTGGAGCAGACCAGACATCGTCTGAGGGCATGCATGGGCTGCCAGTCTGCGTCCTTCATGGCACTGTGACC AGCGCAGATTGAACTGAGGC
Downstream 100 bases:
>100_bases GCCGGGCGACGTTTGCTTTCCATGTAGATGCGCCCGACGTATTCCCCGAGGATGCCAATGCCGATCAGTTGCACCCCGCC GAGGAACAAGATCGCCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MVLLQTLIRYALVGGGAAAIHLLLLLLLPRLGAPLPLANVAGYLTALLWGYVLHAVLTFRRQTSGELFPRRWLLLQLVIN LSLSLGLPQLMPPLATHPVGIALLVFTPTAVNALVWWLAAHQVQRLRRGDGLATSALQFHADDLGLCAAVNASILALADR GLLQGTSVMLNGSDLSGAVAGLALRPQLNLVLHLVLTEGLPIAEQEQVPDLLNGRGELQLKVHRLLLLSFWPRSWDWPQL RRQRHQLRLEVDAQIDRFCSLWPDRPLQVDGHQHVHLMPVVWRQLMASRPQHPLAWVRTVHEPLPVGLPLGEWWSVLRSA GWLKWLLLQSLSELQRPDLAARGIATNQWFAGVLCTGRMGDRALQASLRSLRACLLGQEHQHALVLLHPSEPLQSDRELE RFAESQAFYRSPWRQREAQALLSRAGWMSRTK
Sequences:
>Translated_432_residues MVLLQTLIRYALVGGGAAAIHLLLLLLLPRLGAPLPLANVAGYLTALLWGYVLHAVLTFRRQTSGELFPRRWLLLQLVIN LSLSLGLPQLMPPLATHPVGIALLVFTPTAVNALVWWLAAHQVQRLRRGDGLATSALQFHADDLGLCAAVNASILALADR GLLQGTSVMLNGSDLSGAVAGLALRPQLNLVLHLVLTEGLPIAEQEQVPDLLNGRGELQLKVHRLLLLSFWPRSWDWPQL RRQRHQLRLEVDAQIDRFCSLWPDRPLQVDGHQHVHLMPVVWRQLMASRPQHPLAWVRTVHEPLPVGLPLGEWWSVLRSA GWLKWLLLQSLSELQRPDLAARGIATNQWFAGVLCTGRMGDRALQASLRSLRACLLGQEHQHALVLLHPSEPLQSDRELE RFAESQAFYRSPWRQREAQALLSRAGWMSRTK >Mature_432_residues MVLLQTLIRYALVGGGAAAIHLLLLLLLPRLGAPLPLANVAGYLTALLWGYVLHAVLTFRRQTSGELFPRRWLLLQLVIN LSLSLGLPQLMPPLATHPVGIALLVFTPTAVNALVWWLAAHQVQRLRRGDGLATSALQFHADDLGLCAAVNASILALADR GLLQGTSVMLNGSDLSGAVAGLALRPQLNLVLHLVLTEGLPIAEQEQVPDLLNGRGELQLKVHRLLLLSFWPRSWDWPQL RRQRHQLRLEVDAQIDRFCSLWPDRPLQVDGHQHVHLMPVVWRQLMASRPQHPLAWVRTVHEPLPVGLPLGEWWSVLRSA GWLKWLLLQSLSELQRPDLAARGIATNQWFAGVLCTGRMGDRALQASLRSLRACLLGQEHQHALVLLHPSEPLQSDRELE RFAESQAFYRSPWRQREAQALLSRAGWMSRTK
Specific function: Unknown
COG id: COG3394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0249 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002509 - InterPro: IPR006879 - InterPro: IPR022948 [H]
Pfam domain/function: PF04794 YdjC [H]
EC number: NA
Molecular weight: Translated: 48328; Mature: 48328
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLLQTLIRYALVGGGAAAIHLLLLLLLPRLGAPLPLANVAGYLTALLWGYVLHAVLTFR CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RQTSGELFPRRWLLLQLVINLSLSLGLPQLMPPLATHPVGIALLVFTPTAVNALVWWLAA HHCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHH HQVQRLRRGDGLATSALQFHADDLGLCAAVNASILALADRGLLQGTSVMLNGSDLSGAVA HHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCHHHHHHHHCCHHCCCEEEEECCCCCHHHH GLALRPQLNLVLHLVLTEGLPIAEQEQVPDLLNGRGELQLKVHRLLLLSFWPRSWDWPQL CEEECCHHHHHHHHHHHCCCCCCCHHCCCHHHCCCCCEEHHHHHHHHHHHCCCCCCCHHH RRQRHQLRLEVDAQIDRFCSLWPDRPLQVDGHQHVHLMPVVWRQLMASRPQHPLAWVRTV HHHHHHEEEEEHHHHHHHHHCCCCCCEEECCCCCEEEHHHHHHHHHHCCCCCCHHHHHHH HEPLPVGLPLGEWWSVLRSAGWLKWLLLQSLSELQRPDLAARGIATNQWFAGVLCTGRMG HCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHEEEECCCC DRALQASLRSLRACLLGQEHQHALVLLHPSEPLQSDRELERFAESQAFYRSPWRQREAQA HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHH LLSRAGWMSRTK HHHHHCCCCCCC >Mature Secondary Structure MVLLQTLIRYALVGGGAAAIHLLLLLLLPRLGAPLPLANVAGYLTALLWGYVLHAVLTFR CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RQTSGELFPRRWLLLQLVINLSLSLGLPQLMPPLATHPVGIALLVFTPTAVNALVWWLAA HHCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHH HQVQRLRRGDGLATSALQFHADDLGLCAAVNASILALADRGLLQGTSVMLNGSDLSGAVA HHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCHHHHHHHHCCHHCCCEEEEECCCCCHHHH GLALRPQLNLVLHLVLTEGLPIAEQEQVPDLLNGRGELQLKVHRLLLLSFWPRSWDWPQL CEEECCHHHHHHHHHHHCCCCCCCHHCCCHHHCCCCCEEHHHHHHHHHHHCCCCCCCHHH RRQRHQLRLEVDAQIDRFCSLWPDRPLQVDGHQHVHLMPVVWRQLMASRPQHPLAWVRTV HHHHHHEEEEEHHHHHHHHHCCCCCCEEECCCCCEEEHHHHHHHHHHCCCCCCHHHHHHH HEPLPVGLPLGEWWSVLRSAGWLKWLLLQSLSELQRPDLAARGIATNQWFAGVLCTGRMG HCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHEEEECCCC DRALQASLRSLRACLLGQEHQHALVLLHPSEPLQSDRELERFAESQAFYRSPWRQREAQA HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHH LLSRAGWMSRTK HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]