Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

Click here to switch to the map view.

The map label for this gene is 148241483

Identifier: 148241483

GI number: 148241483

Start: 365143

End: 365415

Strand: Direct

Name: 148241483

Synonym: SynRCC307_0384

Alternate gene names: NA

Gene position: 365143-365415 (Clockwise)

Preceding gene: 148241479

Following gene: 148241486

Centisome position: 16.41

GC content: 67.03

Gene sequence:

>273_bases
GTGCCTAAGGCCGTGGCGACCCGTCAGACCTCCAGCAGTGGCCGCGCCAAGTCGCCGCGTATTCAGGTGGTGTTGCCAGA
AGCGCTTCTCGAGCGCCTGGCGGTGGCGGCAGACCAGGACAGCCGCACGGTCAGCAACATGGCCAAGGTTTTGATTCAGC
AAGGCCTCGATCGCTTGCAGGGCGGCGTGCGCCATCAACTCGAGCGTCAGCAGCAGGTGCAGCCCCGTCTGCGTCAGGGC
CGGCCGCGGCGGATTCGTTTGCGCGGCGGCTAA

Upstream 100 bases:

>100_bases
TTGTCAGCGGAGGCGGCCATGGCGGGGATTGCCGGTTCCATCAGCATACGCATGGATACTATCCGTGGCGATCTCAGTAC
ACTTGTGTGTGTGACCGTGT

Downstream 100 bases:

>100_bases
TTAGGGCTCGGCCACTTGCCCCAGCAGGCCCGCTCGCGCTCCTGTGATCGATGGGGCGCTTCCCGGCAGTCCCAGCTGCC
GCCACCAGGCCAGAAGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MPKAVATRQTSSSGRAKSPRIQVVLPEALLERLAVAADQDSRTVSNMAKVLIQQGLDRLQGGVRHQLERQQQVQPRLRQG
RPRRIRLRGG

Sequences:

>Translated_90_residues
MPKAVATRQTSSSGRAKSPRIQVVLPEALLERLAVAADQDSRTVSNMAKVLIQQGLDRLQGGVRHQLERQQQVQPRLRQG
RPRRIRLRGG
>Mature_89_residues
PKAVATRQTSSSGRAKSPRIQVVLPEALLERLAVAADQDSRTVSNMAKVLIQQGLDRLQGGVRHQLERQQQVQPRLRQGR
PRRIRLRGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10073; Mature: 9942

Theoretical pI: Translated: 12.56; Mature: 12.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKAVATRQTSSSGRAKSPRIQVVLPEALLERLAVAADQDSRTVSNMAKVLIQQGLDRLQ
CCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GGVRHQLERQQQVQPRLRQGRPRRIRLRGG
HHHHHHHHHHHHHHHHHHCCCCCEEEECCC
>Mature Secondary Structure 
PKAVATRQTSSSGRAKSPRIQVVLPEALLERLAVAADQDSRTVSNMAKVLIQQGLDRLQ
CCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GGVRHQLERQQQVQPRLRQGRPRRIRLRGG
HHHHHHHHHHHHHHHHHHCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA