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The map label for this gene is rfbU [H]

Identifier: 148241486

GI number: 148241486

Start: 367232

End: 368296

Strand: Direct

Name: rfbU [H]

Synonym: SynRCC307_0387

Alternate gene names: 148241486

Gene position: 367232-368296 (Clockwise)

Preceding gene: 148241483

Following gene: 148241489

Centisome position: 16.51

GC content: 64.98

Gene sequence:

>1065_bases
ATGACCCACTGTGAGACCGTAACGCTCATGCAAACTCCCCTCGCTCTTTTTAACGGCAGCTATGTCGGAGAGCGGCCCAC
GGGGATTGGCGTTGTGGCGAGGGATTTGGCCGCCGCCTTGGGTCCTGAGCAGGTGCCAGCCGTGTGGCCCCAAGGCATGG
CGCCCGATCAGGGCAGCGCGGGCCATGGCCGGCGTCTGTGGTGGACCCAGAGGCAGCTTCCGAAGCTGTGGCGAGCTAGT
GGCGCGCCGCTGTTGTTATCGCCATTGCCGGAAGCCCCTCTGTTGGCAGGCGTGCCTTCGGTGGTGCTGGCCCATGACCT
GCTGCCGCTGCGGTACCCGCAGCTGACGCCGCTGCTGGCTTACCACCTGGCCTATGTGCCGCTGGTGCTGCGCCGCGCTC
GCCACGTGCTCTGCAATTCCGAGGCGACGGCCCGGGAGGTGCATGGCCGCATTGGTGTGCCAACACGCCGCTTGTCCGTC
TTGAAGTTGGGCTTCAACCCAGGACAGCTTCGCCCTTTGGGCTATCAGCGCGAAGCGGAATTGCTGGTGCTCGGCCGCCA
TGACCCCCACAAAAACCTGCGCCGGCTGTTGAAGGCGGTGGCAGCGCTGCGCGATCGCGAGCACCGCATTCACTTTGTGG
GGCCCCACGATCGCCGCTACACACCCAAACTTCAGGCGCTGGCCCAGGAGCTGGGTATCGCCTCGCGTTGCCGCTGGACC
GCTTGGGTGAGCAACGACGAGCGCTTGGAGTTGCTGAATCGGGCCCGCGCCTTGGTGATGCCGAGCCTCTGGGAGGGATT
TGGTTTGCCAGCCCTCGAAGCGATGGCTTGCGGCACGCCGGTGTTGGCCTCCACGGCTGGTGCTTTACCGGAAGTGGTGG
GAGAGGTGGCCGTTCCCCTTGATCCGATGTCTTCAGCGCAAATGGCTGCGGCTATCGACGACTTTTTGCAGTCGAGTGCG
CTGCAACAGCAGTTGGGCCAGCAGGGGCCGTTGCGGGCGGCTGGCTTTAGTTGGGCGCAAACCGGGGCCGATTTGAAGCA
GCGTTTGCAGGCCTTGTGCCCCTGA

Upstream 100 bases:

>100_bases
GAGTCCTGGGTGAAATTGGGAACGGTGTCCCCAAGCTGGAGCGCCATGACTGTGGACAAAGTGTCTTTTTGATCGTGGCA
CATGCCCTGCGCCGCAGGCC

Downstream 100 bases:

>100_bases
GCTCTTAGGGCACCAGCAGACCGCTGGGGCGCTGCAAGCGCAAACAGCGCATGCCGGCCGCTGCAGCCGCCTGCTCATCG
GCGCCGCTATCGCCAATCAG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MTHCETVTLMQTPLALFNGSYVGERPTGIGVVARDLAAALGPEQVPAVWPQGMAPDQGSAGHGRRLWWTQRQLPKLWRAS
GAPLLLSPLPEAPLLAGVPSVVLAHDLLPLRYPQLTPLLAYHLAYVPLVLRRARHVLCNSEATAREVHGRIGVPTRRLSV
LKLGFNPGQLRPLGYQREAELLVLGRHDPHKNLRRLLKAVAALRDREHRIHFVGPHDRRYTPKLQALAQELGIASRCRWT
AWVSNDERLELLNRARALVMPSLWEGFGLPALEAMACGTPVLASTAGALPEVVGEVAVPLDPMSSAQMAAAIDDFLQSSA
LQQQLGQQGPLRAAGFSWAQTGADLKQRLQALCP

Sequences:

>Translated_354_residues
MTHCETVTLMQTPLALFNGSYVGERPTGIGVVARDLAAALGPEQVPAVWPQGMAPDQGSAGHGRRLWWTQRQLPKLWRAS
GAPLLLSPLPEAPLLAGVPSVVLAHDLLPLRYPQLTPLLAYHLAYVPLVLRRARHVLCNSEATAREVHGRIGVPTRRLSV
LKLGFNPGQLRPLGYQREAELLVLGRHDPHKNLRRLLKAVAALRDREHRIHFVGPHDRRYTPKLQALAQELGIASRCRWT
AWVSNDERLELLNRARALVMPSLWEGFGLPALEAMACGTPVLASTAGALPEVVGEVAVPLDPMSSAQMAAAIDDFLQSSA
LQQQLGQQGPLRAAGFSWAQTGADLKQRLQALCP
>Mature_353_residues
THCETVTLMQTPLALFNGSYVGERPTGIGVVARDLAAALGPEQVPAVWPQGMAPDQGSAGHGRRLWWTQRQLPKLWRASG
APLLLSPLPEAPLLAGVPSVVLAHDLLPLRYPQLTPLLAYHLAYVPLVLRRARHVLCNSEATAREVHGRIGVPTRRLSVL
KLGFNPGQLRPLGYQREAELLVLGRHDPHKNLRRLLKAVAALRDREHRIHFVGPHDRRYTPKLQALAQELGIASRCRWTA
WVSNDERLELLNRARALVMPSLWEGFGLPALEAMACGTPVLASTAGALPEVVGEVAVPLDPMSSAQMAAAIDDFLQSSAL
QQQLGQQGPLRAAGFSWAQTGADLKQRLQALCP

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38643; Mature: 38512

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHCETVTLMQTPLALFNGSYVGERPTGIGVVARDLAAALGPEQVPAVWPQGMAPDQGSA
CCCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GHGRRLWWTQRQLPKLWRASGAPLLLSPLPEAPLLAGVPSVVLAHDLLPLRYPQLTPLLA
CCCCCEEEHHHHHHHHHHCCCCCEEECCCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHH
YHLAYVPLVLRRARHVLCNSEATAREVHGRIGVPTRRLSVLKLGFNPGQLRPLGYQREAE
HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCC
LLVLGRHDPHKNLRRLLKAVAALRDREHRIHFVGPHDRRYTPKLQALAQELGIASRCRWT
EEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCHHHHCEEE
AWVSNDERLELLNRARALVMPSLWEGFGLPALEAMACGTPVLASTAGALPEVVGEVAVPL
EECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
DPMSSAQMAAAIDDFLQSSALQQQLGQQGPLRAAGFSWAQTGADLKQRLQALCP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
THCETVTLMQTPLALFNGSYVGERPTGIGVVARDLAAALGPEQVPAVWPQGMAPDQGSA
CCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GHGRRLWWTQRQLPKLWRASGAPLLLSPLPEAPLLAGVPSVVLAHDLLPLRYPQLTPLLA
CCCCCEEEHHHHHHHHHHCCCCCEEECCCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHH
YHLAYVPLVLRRARHVLCNSEATAREVHGRIGVPTRRLSVLKLGFNPGQLRPLGYQREAE
HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCC
LLVLGRHDPHKNLRRLLKAVAALRDREHRIHFVGPHDRRYTPKLQALAQELGIASRCRWT
EEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCHHHHCEEE
AWVSNDERLELLNRARALVMPSLWEGFGLPALEAMACGTPVLASTAGALPEVVGEVAVPL
EECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
DPMSSAQMAAAIDDFLQSSALQQQLGQQGPLRAAGFSWAQTGADLKQRLQALCP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]