| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241437
Identifier: 148241437
GI number: 148241437
Start: 328271
End: 329215
Strand: Direct
Name: 148241437
Synonym: SynRCC307_0338
Alternate gene names: NA
Gene position: 328271-329215 (Clockwise)
Preceding gene: 148241436
Following gene: 148241440
Centisome position: 14.75
GC content: 62.22
Gene sequence:
>945_bases TTGCAGGCGCCCCCCCCTTCCGATTCCACCCCAGCACCCTCCGATCGGCTTTGGCTGCGTTCGGAATTGATGGGAACCCA GGTCATTACCACTGACACCGGCCGCCGTCTTGGCGTGGTGGGCGAAGTCTTGGTGGACATCGACCGCCGCGAGGTGGTGG CCCTTGGCCTGCGCGACAACCCGTTGACCCGTTTTCTGCCTGGTCTGCCGCGTTGGATGCCGCTGGAGCAGATCCGTCAG GTGGGTGATGTGATCTTGGTTGATTCCCTCGACTCCCTGGCTGAGGGCTTCAACCCCGATCGCTACGACCGGGTGATCAA TTGTCAGGTGGTCTCGGAAGCCGGTGAGCAGCTTGGCCGGGTTCTGGGTTTCAGTTTTGACATCGAAACCGGTGAGCTCA CCACCTTGGTGGTGGGCGCTGTGGGCGTGCCCCTTCTGGGTGAAGGCATCCTCAGTACCTGGGAGCTGCCCGTTGATGAA ATCGTCAGCTCGGGCCCGGATCGAATCATTGTTTATGAGGGCGCGGAAGAGAAGCTCAAGCAGCTCAACACCGGTTTGCT CGAAAAGCTGGGTATAGGAGGCGGCAGCCTCGAGCGCGAAGAGCGTGAGCGCTACCGGCTCAACATGGTGCCAGTTGAAA ATCAGTTGCCGGCCGGCGTTCCCACTGAACAGGAGCAGCGGCGCCTTGAGGCCTCTAGGCAAGAGCGTTTTGAGCCCCAG CGCCAGGAAGACGACTACGAATACGTGGAACTTGAACAGCGCCAACGCCGCGAGCCCCAGCGCCTCTATATGGATGAGGA GCGCGATCCCTATGGCGAGCGGGATCGCTACGCCGAGCGTGATCGCTACCGCGACCGCTACGACGCGCCATTGGATGTCG AGCCCGAGCCGCTGCCAGAACCCCGCAGGGGGCCTCAGCCCGCTGAAGAAGACCCCTGGGCGTAA
Upstream 100 bases:
>100_bases GTGACCCAGGCCCGCGGTGCCCACACCCAGGTGGTGGGCATGCCGGCTGCAGCCTGATTGGCGATCCTGCGACACAATGG CTCGATCGAGCAGTTAGCCC
Downstream 100 bases:
>100_bases CTCACGTCTTGTCTTTGAAGTCCAGCGAGGCTGAGTTCACGCAGTAGCGCAGCCCAGTGGGGGTGGGGCTGTCTTGAAAC ACATGGCCCAGGTGCGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MQAPPPSDSTPAPSDRLWLRSELMGTQVITTDTGRRLGVVGEVLVDIDRREVVALGLRDNPLTRFLPGLPRWMPLEQIRQ VGDVILVDSLDSLAEGFNPDRYDRVINCQVVSEAGEQLGRVLGFSFDIETGELTTLVVGAVGVPLLGEGILSTWELPVDE IVSSGPDRIIVYEGAEEKLKQLNTGLLEKLGIGGGSLEREERERYRLNMVPVENQLPAGVPTEQEQRRLEASRQERFEPQ RQEDDYEYVELEQRQRREPQRLYMDEERDPYGERDRYAERDRYRDRYDAPLDVEPEPLPEPRRGPQPAEEDPWA
Sequences:
>Translated_314_residues MQAPPPSDSTPAPSDRLWLRSELMGTQVITTDTGRRLGVVGEVLVDIDRREVVALGLRDNPLTRFLPGLPRWMPLEQIRQ VGDVILVDSLDSLAEGFNPDRYDRVINCQVVSEAGEQLGRVLGFSFDIETGELTTLVVGAVGVPLLGEGILSTWELPVDE IVSSGPDRIIVYEGAEEKLKQLNTGLLEKLGIGGGSLEREERERYRLNMVPVENQLPAGVPTEQEQRRLEASRQERFEPQ RQEDDYEYVELEQRQRREPQRLYMDEERDPYGERDRYAERDRYRDRYDAPLDVEPEPLPEPRRGPQPAEEDPWA >Mature_314_residues MQAPPPSDSTPAPSDRLWLRSELMGTQVITTDTGRRLGVVGEVLVDIDRREVVALGLRDNPLTRFLPGLPRWMPLEQIRQ VGDVILVDSLDSLAEGFNPDRYDRVINCQVVSEAGEQLGRVLGFSFDIETGELTTLVVGAVGVPLLGEGILSTWELPVDE IVSSGPDRIIVYEGAEEKLKQLNTGLLEKLGIGGGSLEREERERYRLNMVPVENQLPAGVPTEQEQRRLEASRQERFEPQ RQEDDYEYVELEQRQRREPQRLYMDEERDPYGERDRYAERDRYRDRYDAPLDVEPEPLPEPRRGPQPAEEDPWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35845; Mature: 35845
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAPPPSDSTPAPSDRLWLRSELMGTQVITTDTGRRLGVVGEVLVDIDRREVVALGLRDN CCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCC PLTRFLPGLPRWMPLEQIRQVGDVILVDSLDSLAEGFNPDRYDRVINCQVVSEAGEQLGR CHHHHHCCCCCCCCHHHHHHHCCEEEEECHHHHHCCCCCCHHHHEEEHHHHHHHHHHHHH VLGFSFDIETGELTTLVVGAVGVPLLGEGILSTWELPVDEIVSSGPDRIIVYEGAEEKLK HHCCEEECCCCCHHHHHHHHHCCCHHCCHHHHHCCCCHHHHHCCCCCEEEEECCHHHHHH QLNTGLLEKLGIGGGSLEREERERYRLNMVPVENQLPAGVPTEQEQRRLEASRQERFEPQ HHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC RQEDDYEYVELEQRQRREPQRLYMDEERDPYGERDRYAERDRYRDRYDAPLDVEPEPLPE CCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC PRRGPQPAEEDPWA CCCCCCCCCCCCCC >Mature Secondary Structure MQAPPPSDSTPAPSDRLWLRSELMGTQVITTDTGRRLGVVGEVLVDIDRREVVALGLRDN CCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCC PLTRFLPGLPRWMPLEQIRQVGDVILVDSLDSLAEGFNPDRYDRVINCQVVSEAGEQLGR CHHHHHCCCCCCCCHHHHHHHCCEEEEECHHHHHCCCCCCHHHHEEEHHHHHHHHHHHHH VLGFSFDIETGELTTLVVGAVGVPLLGEGILSTWELPVDEIVSSGPDRIIVYEGAEEKLK HHCCEEECCCCCHHHHHHHHHCCCHHCCHHHHHCCCCHHHHHCCCCCEEEEECCHHHHHH QLNTGLLEKLGIGGGSLEREERERYRLNMVPVENQLPAGVPTEQEQRRLEASRQERFEPQ HHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC RQEDDYEYVELEQRQRREPQRLYMDEERDPYGERDRYAERDRYRDRYDAPLDVEPEPLPE CCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC PRRGPQPAEEDPWA CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA