Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is wcaA [C]

Identifier: 148241304

GI number: 148241304

Start: 208620

End: 209447

Strand: Direct

Name: wcaA [C]

Synonym: SynRCC307_0205

Alternate gene names: 148241304

Gene position: 208620-209447 (Clockwise)

Preceding gene: 148241303

Following gene: 148241305

Centisome position: 9.38

GC content: 38.53

Gene sequence:

>828_bases
GTGACCAGTTCTAATCAACCTCTGGTAAGCATAATTATTCCCTGCTTTAATTGTGCTTCCACTGTTCTTGAAAGCCTCCA
AAGCGTTCAAAGTCAAACTTTTTCAAACTTTCAGTGCATAATTGTTGATGATTGCTCGACCGATCAGACTCAAGCATTGG
TTATGAGCTTTATAGAAGGCGATTCTCGTTTTAGGTATTTAATTACGCAATCAAATCAGGGTGTTTCTTCTGCTAGGAAT
CTTGCTCTTGATAACTGTTCTTCTCAATACATTGCCTTCCTAGACTCTGATGATCTTTGGCATCCAGAATTCTTGACCCT
TGCACTTGATTATATGTCTACCAATTCCGCAAGATTCGTGTATTCACCAGTTTTGAGATTTATTGATAATGCAAAGAGAA
CCGGCTTTGTTAAAGTGCCTCCGTTCCGTGTTTCTCTGAGTTCGCTTCTCACTAATAATCATATACCATTAGTCACGGCA
GTCTTCGATGCGTCTTTACTTTCCCCAAGTTTAAGATTTACTCCTCAACGCCCCGAAGACTATATTTTTTGGATTCAACT
ATTTACTCTTAATCCTAGCCTTGAGGGTTTCCGTTTCTCTAACTTACCACTTGGTTTTTATCGCGTCTCTCCTAAGCAAA
GGTCTTCTAATAAGATTATAAATATTAAAAGAGCCTATTATGTTTACCGATCCGTTTGGCACTTTGGGTATGTAAAGTCT
CTTTTTATGACCTTGGTTTATGTAGCTAATAGTTTGCTTGACTATATTTTCCAGTTTTCTGCTCCTCGTAATTTCCCATC
TTCAGTTTTTCTTGGCCCGAACTCGTGA

Upstream 100 bases:

>100_bases
ATCCTCTGCACGTCTGCCTGGACCAAAACCCAAGAACAGGCCATTCGTGCAGGCTCATGACCTTGACTTCTTAAATCTCT
GATAATTCCCCCTTCGTTTT

Downstream 100 bases:

>100_bases
AAGTTGCAATTACAGGCTCGTCAGGATTTGTTGGGTCTAACCTTGTTTCCTCTTTTATTGCCAATTCAATAGACTTTATT
TGTATTGATCGTTTCCCCTT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTSSNQPLVSIIIPCFNCASTVLESLQSVQSQTFSNFQCIIVDDCSTDQTQALVMSFIEGDSRFRYLITQSNQGVSSARN
LALDNCSSQYIAFLDSDDLWHPEFLTLALDYMSTNSARFVYSPVLRFIDNAKRTGFVKVPPFRVSLSSLLTNNHIPLVTA
VFDASLLSPSLRFTPQRPEDYIFWIQLFTLNPSLEGFRFSNLPLGFYRVSPKQRSSNKIINIKRAYYVYRSVWHFGYVKS
LFMTLVYVANSLLDYIFQFSAPRNFPSSVFLGPNS

Sequences:

>Translated_275_residues
MTSSNQPLVSIIIPCFNCASTVLESLQSVQSQTFSNFQCIIVDDCSTDQTQALVMSFIEGDSRFRYLITQSNQGVSSARN
LALDNCSSQYIAFLDSDDLWHPEFLTLALDYMSTNSARFVYSPVLRFIDNAKRTGFVKVPPFRVSLSSLLTNNHIPLVTA
VFDASLLSPSLRFTPQRPEDYIFWIQLFTLNPSLEGFRFSNLPLGFYRVSPKQRSSNKIINIKRAYYVYRSVWHFGYVKS
LFMTLVYVANSLLDYIFQFSAPRNFPSSVFLGPNS
>Mature_274_residues
TSSNQPLVSIIIPCFNCASTVLESLQSVQSQTFSNFQCIIVDDCSTDQTQALVMSFIEGDSRFRYLITQSNQGVSSARNL
ALDNCSSQYIAFLDSDDLWHPEFLTLALDYMSTNSARFVYSPVLRFIDNAKRTGFVKVPPFRVSLSSLLTNNHIPLVTAV
FDASLLSPSLRFTPQRPEDYIFWIQLFTLNPSLEGFRFSNLPLGFYRVSPKQRSSNKIINIKRAYYVYRSVWHFGYVKSL
FMTLVYVANSLLDYIFQFSAPRNFPSSVFLGPNS

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788372, Length=108, Percent_Identity=37.037037037037, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1790044, Length=244, Percent_Identity=26.2295081967213, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 31296; Mature: 31165

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSNQPLVSIIIPCFNCASTVLESLQSVQSQTFSNFQCIIVDDCSTDQTQALVMSFIEG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCC
DSRFRYLITQSNQGVSSARNLALDNCSSQYIAFLDSDDLWHPEFLTLALDYMSTNSARFV
CCEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHH
YSPVLRFIDNAKRTGFVKVPPFRVSLSSLLTNNHIPLVTAVFDASLLSPSLRFTPQRPED
HHHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCCCCEEHEEHHHHHCCCCCCCCCCCCCC
YIFWIQLFTLNPSLEGFRFSNLPLGFYRVSPKQRSSNKIINIKRAYYVYRSVWHFGYVKS
EEEEEEEEEECCCCCCEEECCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
LFMTLVYVANSLLDYIFQFSAPRNFPSSVFLGPNS
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
>Mature Secondary Structure 
TSSNQPLVSIIIPCFNCASTVLESLQSVQSQTFSNFQCIIVDDCSTDQTQALVMSFIEG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCC
DSRFRYLITQSNQGVSSARNLALDNCSSQYIAFLDSDDLWHPEFLTLALDYMSTNSARFV
CCEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHH
YSPVLRFIDNAKRTGFVKVPPFRVSLSSLLTNNHIPLVTAVFDASLLSPSLRFTPQRPED
HHHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCCCCEEHEEHHHHHCCCCCCCCCCCCCC
YIFWIQLFTLNPSLEGFRFSNLPLGFYRVSPKQRSSNKIINIKRAYYVYRSVWHFGYVKS
EEEEEEEEEECCCCCCEEECCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
LFMTLVYVANSLLDYIFQFSAPRNFPSSVFLGPNS
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]