| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is yefI [C]
Identifier: 148241273
GI number: 148241273
Start: 173841
End: 175046
Strand: Direct
Name: yefI [C]
Synonym: SynRCC307_0174
Alternate gene names: 148241273
Gene position: 173841-175046 (Clockwise)
Preceding gene: 148241272
Following gene: 148241287
Centisome position: 7.81
GC content: 57.38
Gene sequence:
>1206_bases ATGAATCAGCCCTTGCGTTTGGCTGTGCTGATTACGCACCCGATCCAGTATTTCCGCCCTGTCTTTGCTGAGTTGGCTCA GCAACCTGGCTTGGAGCTGCGGGTGTTTTTTGGTTGTGATCATGGCCGGCGCAGCAGTTTGGATCCCGACTTTGGTGTCA GCTTCGCTTGGGATGTTCCAGCCGATGAAGGCTTCCCCCATGCCTTCATCAGCCACGCTCCTTTGGATCAGTTGAGCCGG CTGCGTTCTGCCTTGCCGCTTGCTTGCAGAGCTGCCCGCGCCATCAGCGCCTGGCAGCCCGATCAGGTGCTGATCTTTGC TTACACCCCGGTTTTCATCGGTTTGTCCACTTTGCTGTTGAAGATTCGGGGGCAATCGTTGTTGTTGCGGGCCGATGGCA CCGATCGCGCCTTTCCGCGCAGTTGGCTGAAGAGCTCAATCAAAGACCTTGTGTTGCGGATTTGGTATCGCCAATTTCGC CATTTGTTTCCAATCGGCGTTGATTCCGATCGCCATTTCGCGCGATTGGGCGTTGCCGCCTCACGGCGGCATCCGGTGTC CTACGCCGTGGATGTTGATTTTTTTGCTCAGCAGCAACAGCACTGGTCACCCCAGCGCTTGAGTTTGCGCCACGAACTCG GCATTGCCCCTACTGACTTGGTTCTGCTGTGGAGCGCCAAGATGACGCCGGTCAAGGCTCCGTTCCTGCTGGTTGAGGCC TTGGCCGCATTGCCAGAGCCTGTTCGCCAGCGGTTTTGGGTTGTCGCGATGGGGGATGGCCCCTTGCGCCAAGCGTTTGA GGCTCAACTCCAAACATTGTTGCCAGGCCATACCCATTTCCTTGGCTTCTGCAATCAATCCGAGATTGGCCGTGGTTATG CGATGGCGGATGCCTTGGTATTTCCCTCAGTGCAGGGGGAAACATGGGGATTGGTGGTGAATGAAGCGCTGCAATTTGGT TTGGCTGTGATGGCCAGTGATCATCCAGGCTGTGCGGCTGATCTGCTGGCCTCAGAACGACCTGTTCCCACCGGTTCGGC GGTGTTCCCCAGTGGTGATCCCATTGCTTTTGCCAATGCTCTGCTGGCGTTTGCAAAGGCCCACCCGGAGGGTTTCAGCC CTCAGCCGAGCACTGATCTCCCCCATCCCCGCGATTTGGCCAGCACCATTCAGCATTGGGCTAGCCATTCGGCCAGCACC ACATAA
Upstream 100 bases:
>100_bases ACCTCTATTACCTACGTAATGCTGGGATTCTGCTGGATTTGTTGATCCTGCTGAAAACCATTCGCCTGGTGCTGCGCGCC CAGGGTGCTCAGCCGCAGCA
Downstream 100 bases:
>100_bases CGCCAGTAGGGCTTGAAGCGGCCACTGAGCCGCAACAGGATCCAACTTCCCCAGAAGCTGCGCCGTGAAAGCTGCAAGGG TTGCTTCTGCAAAAGACTCC
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Group 1 Family; Glycosyl Transferase
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MNQPLRLAVLITHPIQYFRPVFAELAQQPGLELRVFFGCDHGRRSSLDPDFGVSFAWDVPADEGFPHAFISHAPLDQLSR LRSALPLACRAARAISAWQPDQVLIFAYTPVFIGLSTLLLKIRGQSLLLRADGTDRAFPRSWLKSSIKDLVLRIWYRQFR HLFPIGVDSDRHFARLGVAASRRHPVSYAVDVDFFAQQQQHWSPQRLSLRHELGIAPTDLVLLWSAKMTPVKAPFLLVEA LAALPEPVRQRFWVVAMGDGPLRQAFEAQLQTLLPGHTHFLGFCNQSEIGRGYAMADALVFPSVQGETWGLVVNEALQFG LAVMASDHPGCAADLLASERPVPTGSAVFPSGDPIAFANALLAFAKAHPEGFSPQPSTDLPHPRDLASTIQHWASHSAST T
Sequences:
>Translated_401_residues MNQPLRLAVLITHPIQYFRPVFAELAQQPGLELRVFFGCDHGRRSSLDPDFGVSFAWDVPADEGFPHAFISHAPLDQLSR LRSALPLACRAARAISAWQPDQVLIFAYTPVFIGLSTLLLKIRGQSLLLRADGTDRAFPRSWLKSSIKDLVLRIWYRQFR HLFPIGVDSDRHFARLGVAASRRHPVSYAVDVDFFAQQQQHWSPQRLSLRHELGIAPTDLVLLWSAKMTPVKAPFLLVEA LAALPEPVRQRFWVVAMGDGPLRQAFEAQLQTLLPGHTHFLGFCNQSEIGRGYAMADALVFPSVQGETWGLVVNEALQFG LAVMASDHPGCAADLLASERPVPTGSAVFPSGDPIAFANALLAFAKAHPEGFSPQPSTDLPHPRDLASTIQHWASHSAST T >Mature_401_residues MNQPLRLAVLITHPIQYFRPVFAELAQQPGLELRVFFGCDHGRRSSLDPDFGVSFAWDVPADEGFPHAFISHAPLDQLSR LRSALPLACRAARAISAWQPDQVLIFAYTPVFIGLSTLLLKIRGQSLLLRADGTDRAFPRSWLKSSIKDLVLRIWYRQFR HLFPIGVDSDRHFARLGVAASRRHPVSYAVDVDFFAQQQQHWSPQRLSLRHELGIAPTDLVLLWSAKMTPVKAPFLLVEA LAALPEPVRQRFWVVAMGDGPLRQAFEAQLQTLLPGHTHFLGFCNQSEIGRGYAMADALVFPSVQGETWGLVVNEALQFG LAVMASDHPGCAADLLASERPVPTGSAVFPSGDPIAFANALLAFAKAHPEGFSPQPSTDLPHPRDLASTIQHWASHSAST T
Specific function: May Be A Glycosyltransferase Involved In The Transfer Of UDP-Galf And UDP-Glucose. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44278; Mature: 44278
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPLRLAVLITHPIQYFRPVFAELAQQPGLELRVFFGCDHGRRSSLDPDFGVSFAWDVP CCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCC ADEGFPHAFISHAPLDQLSRLRSALPLACRAARAISAWQPDQVLIFAYTPVFIGLSTLLL CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHH KIRGQSLLLRADGTDRAFPRSWLKSSIKDLVLRIWYRQFRHLFPIGVDSDRHFARLGVAA HHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHH SRRHPVSYAVDVDFFAQQQQHWSPQRLSLRHELGIAPTDLVLLWSAKMTPVKAPFLLVEA CCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHH LAALPEPVRQRFWVVAMGDGPLRQAFEAQLQTLLPGHTHFLGFCNQSEIGRGYAMADALV HHHCCHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHH FPSVQGETWGLVVNEALQFGLAVMASDHPGCAADLLASERPVPTGSAVFPSGDPIAFANA CCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCEECCCCCCHHHHHH LLAFAKAHPEGFSPQPSTDLPHPRDLASTIQHWASHSASTT HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNQPLRLAVLITHPIQYFRPVFAELAQQPGLELRVFFGCDHGRRSSLDPDFGVSFAWDVP CCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCC ADEGFPHAFISHAPLDQLSRLRSALPLACRAARAISAWQPDQVLIFAYTPVFIGLSTLLL CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHH KIRGQSLLLRADGTDRAFPRSWLKSSIKDLVLRIWYRQFRHLFPIGVDSDRHFARLGVAA HHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHH SRRHPVSYAVDVDFFAQQQQHWSPQRLSLRHELGIAPTDLVLLWSAKMTPVKAPFLLVEA CCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHH LAALPEPVRQRFWVVAMGDGPLRQAFEAQLQTLLPGHTHFLGFCNQSEIGRGYAMADALV HHHCCHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHH FPSVQGETWGLVVNEALQFGLAVMASDHPGCAADLLASERPVPTGSAVFPSGDPIAFANA CCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCEECCCCCCHHHHHH LLAFAKAHPEGFSPQPSTDLPHPRDLASTIQHWASHSASTT HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA