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The map label for this gene is pss [H]

Identifier: 148241272

GI number: 148241272

Start: 172510

End: 173844

Strand: Direct

Name: pss [H]

Synonym: SynRCC307_0173

Alternate gene names: 148241272

Gene position: 172510-173844 (Clockwise)

Preceding gene: 148241271

Following gene: 148241273

Centisome position: 7.75

GC content: 59.48

Gene sequence:

>1335_bases
ATGAGTTGGCGCGCCCCTTGGTTGCGGGAGCGACTGCTGTTGCTGTCGTTGGCGCTGTGGGATCTGGTGGTGGTGTGGGC
CATGTACGGCTCCATTTATCGATTGCGCCTTGGTCACACCCCAGGGGTCACCCTCGCTCTGCTTGTGTTGGTGCTGTTGT
GGCTTGGCGGCTCCTATCTGCTAGGGCTCTACACCCAGCAACGCCGTGGTTGGGCGAGTTGGCAGCGCACTGCTCAGCTG
GCTCTGCTCGTGCTGGCGGTGTTTGTGGCGCAGGCTTGGTTGGCTGGCATTGCTGATTCGGGCACGCGTCTGCGCAGCTT
TCTTTTGCCACTGCTGAGCGCCATCGCTCTTGGATCAGGGCTAGGCCATCAAGCCTTGGCCGCACTACGCCCCGAGCTGG
AAGCGGTTGTGTTGCTTTGCACAGCAGCTGAACGGCCGATTCTGCAGGCAGAACTTGCATCACTGCCAACCACTAGACAG
CAACAGATCACTTTTGTGGAAGAACACGAGGATCCAGAAGTGCTCGCAGGGTTGCCGCGGCGTGGCTTGAACGTGGCGAT
CAGTGATCAGGCGCGGATTCCGGATGCTCACTTGGAACGCTTCATCACCCTCAGGCCACTGGGTGCTCGGGTGAGTTCCT
TGGTGGACTGGGCTGAGCGCAGTCTTCAGCGCGTGCCGCCGGAATTGTTGAGTGAACGCTGGCTGCTGGCAGCCGACGGC
TTCAGCTTGCAACCGGGCCGTTGGAGCTGGCGGGTGAAGCGATTTTTTGATGTTCTCGGTGCGTCCAGCTTGCTGCTGAT
TACCAGCCCACTGGTGCTGATGGCTGGGTTGGCGATTTGGCTGGAAGATCGTGGCCCGATTTTTTACAGCCAGATCCGTA
GTGGTTTGTATGGCGATCCGGTGCGGATTTGGAAATTGCGGAGTATGCGCGTTGATGCCGAAGCCAGCGGCTTGCAGTGG
GCTCAAAAACAAGACCCGCGCATTACTCGTTGTGGTGCCTGGTTGCGGAGTCTGCGGATTGATGAGCTACCCCAGCTTTG
GGCTGTGTTGCGAGGTGATCTCAGTTTGATCGGCCCCCGCCCCGAGCGGCCCGAGCTCGAGCTGGAACTGGAGCAAGCCA
TTCCTCACTACCGCGTTCGCCATTGGATCCGTCCGGGCCTGAGCGGCTGGGCACAGGTCAACTATCGCTATGGCAACAGC
GTGGCCGATAGCCGCATCAAGCTCAGTTACGACCTCTATTACCTACGTAATGCTGGGATTCTGCTGGATTTGTTGATCCT
GCTGAAAACCATTCGCCTGGTGCTGCGCGCCCAGGGTGCTCAGCCGCAGCAATGA

Upstream 100 bases:

>100_bases
AGCAACTGGTGCCTGAATGGCAGCAGGGTGCTGAAGTGAGCACTTCGGCCAAGCTCTTGCCGTTTCCAGTTGTTCCCTCC
AGGTCGACAGCTCAGGCGGG

Downstream 100 bases:

>100_bases
ATCAGCCCTTGCGTTTGGCTGTGCTGATTACGCACCCGATCCAGTATTTCCGCCCTGTCTTTGCTGAGTTGGCTCAGCAA
CCTGGCTTGGAGCTGCGGGT

Product: lipopolysaccharide synthesis sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MSWRAPWLRERLLLLSLALWDLVVVWAMYGSIYRLRLGHTPGVTLALLVLVLLWLGGSYLLGLYTQQRRGWASWQRTAQL
ALLVLAVFVAQAWLAGIADSGTRLRSFLLPLLSAIALGSGLGHQALAALRPELEAVVLLCTAAERPILQAELASLPTTRQ
QQITFVEEHEDPEVLAGLPRRGLNVAISDQARIPDAHLERFITLRPLGARVSSLVDWAERSLQRVPPELLSERWLLAADG
FSLQPGRWSWRVKRFFDVLGASSLLLITSPLVLMAGLAIWLEDRGPIFYSQIRSGLYGDPVRIWKLRSMRVDAEASGLQW
AQKQDPRITRCGAWLRSLRIDELPQLWAVLRGDLSLIGPRPERPELELELEQAIPHYRVRHWIRPGLSGWAQVNYRYGNS
VADSRIKLSYDLYYLRNAGILLDLLILLKTIRLVLRAQGAQPQQ

Sequences:

>Translated_444_residues
MSWRAPWLRERLLLLSLALWDLVVVWAMYGSIYRLRLGHTPGVTLALLVLVLLWLGGSYLLGLYTQQRRGWASWQRTAQL
ALLVLAVFVAQAWLAGIADSGTRLRSFLLPLLSAIALGSGLGHQALAALRPELEAVVLLCTAAERPILQAELASLPTTRQ
QQITFVEEHEDPEVLAGLPRRGLNVAISDQARIPDAHLERFITLRPLGARVSSLVDWAERSLQRVPPELLSERWLLAADG
FSLQPGRWSWRVKRFFDVLGASSLLLITSPLVLMAGLAIWLEDRGPIFYSQIRSGLYGDPVRIWKLRSMRVDAEASGLQW
AQKQDPRITRCGAWLRSLRIDELPQLWAVLRGDLSLIGPRPERPELELELEQAIPHYRVRHWIRPGLSGWAQVNYRYGNS
VADSRIKLSYDLYYLRNAGILLDLLILLKTIRLVLRAQGAQPQQ
>Mature_443_residues
SWRAPWLRERLLLLSLALWDLVVVWAMYGSIYRLRLGHTPGVTLALLVLVLLWLGGSYLLGLYTQQRRGWASWQRTAQLA
LLVLAVFVAQAWLAGIADSGTRLRSFLLPLLSAIALGSGLGHQALAALRPELEAVVLLCTAAERPILQAELASLPTTRQQ
QITFVEEHEDPEVLAGLPRRGLNVAISDQARIPDAHLERFITLRPLGARVSSLVDWAERSLQRVPPELLSERWLLAADGF
SLQPGRWSWRVKRFFDVLGASSLLLITSPLVLMAGLAIWLEDRGPIFYSQIRSGLYGDPVRIWKLRSMRVDAEASGLQWA
QKQDPRITRCGAWLRSLRIDELPQLWAVLRGDLSLIGPRPERPELELELEQAIPHYRVRHWIRPGLSGWAQVNYRYGNSV
ADSRIKLSYDLYYLRNAGILLDLLILLKTIRLVLRAQGAQPQQ

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=182, Percent_Identity=35.7142857142857, Blast_Score=134, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 50166; Mature: 50035

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS01049 UPF0031_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWRAPWLRERLLLLSLALWDLVVVWAMYGSIYRLRLGHTPGVTLALLVLVLLWLGGSYL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCHHH
LGLYTQQRRGWASWQRTAQLALLVLAVFVAQAWLAGIADSGTRLRSFLLPLLSAIALGSG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
LGHQALAALRPELEAVVLLCTAAERPILQAELASLPTTRQQQITFVEEHEDPEVLAGLPR
CCHHHHHHHCHHHHHHHHEECCCCCCHHHHHHHHCCCCCHHHEEEECCCCCHHHHHCCCC
RGLNVAISDQARIPDAHLERFITLRPLGARVSSLVDWAERSLQRVPPELLSERWLLAADG
CCCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECC
FSLQPGRWSWRVKRFFDVLGASSLLLITSPLVLMAGLAIWLEDRGPIFYSQIRSGLYGDP
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHCCCCCCC
VRIWKLRSMRVDAEASGLQWAQKQDPRITRCGAWLRSLRIDELPQLWAVLRGDLSLIGPR
CCEEEEHHHEECCCCCCCCCHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHEECCC
PERPELELELEQAIPHYRVRHWIRPGLSGWAQVNYRYGNSVADSRIKLSYDLYYLRNAGI
CCCCCCEEEHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCH
LLDLLILLKTIRLVLRAQGAQPQQ
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SWRAPWLRERLLLLSLALWDLVVVWAMYGSIYRLRLGHTPGVTLALLVLVLLWLGGSYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCHHH
LGLYTQQRRGWASWQRTAQLALLVLAVFVAQAWLAGIADSGTRLRSFLLPLLSAIALGSG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
LGHQALAALRPELEAVVLLCTAAERPILQAELASLPTTRQQQITFVEEHEDPEVLAGLPR
CCHHHHHHHCHHHHHHHHEECCCCCCHHHHHHHHCCCCCHHHEEEECCCCCHHHHHCCCC
RGLNVAISDQARIPDAHLERFITLRPLGARVSSLVDWAERSLQRVPPELLSERWLLAADG
CCCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECC
FSLQPGRWSWRVKRFFDVLGASSLLLITSPLVLMAGLAIWLEDRGPIFYSQIRSGLYGDP
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHCCCCCCC
VRIWKLRSMRVDAEASGLQWAQKQDPRITRCGAWLRSLRIDELPQLWAVLRGDLSLIGPR
CCEEEEHHHEECCCCCCCCCHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHEECCC
PERPELELELEQAIPHYRVRHWIRPGLSGWAQVNYRYGNSVADSRIKLSYDLYYLRNAGI
CCCCCCEEEHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCH
LLDLLILLKTIRLVLRAQGAQPQQ
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2851702 [H]