Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241270

Identifier: 148241270

GI number: 148241270

Start: 169358

End: 170551

Strand: Direct

Name: 148241270

Synonym: SynRCC307_0171

Alternate gene names: NA

Gene position: 169358-170551 (Clockwise)

Preceding gene: 148241265

Following gene: 148241271

Centisome position: 7.61

GC content: 58.21

Gene sequence:

>1194_bases
ATGAAAGACCCGGGAAAACTACGTGGTATGCCTCTTCTTTCTGGAAGCAGGTGGCCAGTGAGGCATCTGCCTAAATGGCG
CGCAGCGGTCGATGCCCTGTTCTTGATTTCGATCGTGCTGTTCTTGTGGCCCCTGGATCCCTGGATCAGCAGCATTCCGG
CTGTTCTCTGGGTGCTGCTTCAGTTGTTGGTGGCTCCAGTTCAGCGCCGTTGGGCCGCTTGGCCGATGCTGTTTGTGCTG
TTGCTGTTCAGCCGCAGTTGGTGGCTCAACCAAATGCCCCATCCAGTGGCTGCCCAGGATGGGGTATTGGTTGCCGGAGC
TTTGTTAGCGGGAGCTTGTGTGGCCCCGCAGCGTTGGCAGCTGCTGTTGCGTCTTCCCTTGCTGGTGTTGCCGCTGTTGC
TGTTTGAGATGGGTGCCAAGCCCTGGACGCCCAATCCGTTGGCAGGTGCTAATCAGGGGGGCTATCTGTTGGGGTTGATT
TGGCTGCTGGCAATCGCTTGGTTCCGCCAGGGCAACCAGCCTCATTTGCAGCGGGTGCTGGCTGGCGTGGCAACGGCCCT
GGCTGCGGTGATGGTGTGGCAGACAGGTTCTCGTGCTGCGTTTGTAGCCGCCGTTGTTTCAGCCGCCTTGTTGTGGATTC
AGCAGGGCATTGGCTTAGGTCAGGTTTGCAAGCGTGGTTTCTTGCTGCTGGGTTTTGGTGCGGCAGCTTTGGCGGCTAAA
CAGTTGCTTCGCCCCTCCAGCACAGGGATCCCAGGAATCGATCTCAGCTCTGATACCGGCCGGTTGGCGATCGCTCAGTG
TTATGGCGCGATTCCGTTCAGCGGTAACAACCGGTTCCTCTATGGCGTCGGTTTCGACCGCGCTGGTGAGTTTTGTTCCG
ACCCCATCAACGGTGGTGTGGCTGATCATGCCCACAACATTTATCTCCAGCTCTTTGCAAGCTCAGGGGTGCTGGGGGTG
TTCGGGCTTTTTCTCCTTCTGGCCTTGCTGGTGCAGGCATGGCGCTCAGCGGCCCCTGTGATGGACCCATTTCCGCTAGT
TGCTGGACAGCTGGCGCTGCTCTACACGCTGATTCAGGGCTTCCTCGATCTTTCGCTTCTGCATTGGCCTGTCACCTTGG
TGCTCACAGGCGTCCTTTTGGGCATCCCATTGAGCTGGCACAGGGCCAGTGATAACCAGTTCACGCAAATTTAG

Upstream 100 bases:

>100_bases
TCACTTGGCTGGTTGGTGTAATTTCCTGGCTCAGTACTGGTTGCACAGCGCTGAGTGAAAGCATGGCTGCAGCAACGGCG
CGGCTCAGCACAAGACTCAG

Downstream 100 bases:

>100_bases
TCTCACCGTGAATAAATGAGATAGCCCTTGCGGCCAGCTTCCCGGCAACAGCTCAGTCCAGTGATCAGGCGCTTGCTGCT
GCTCGCTGCTGATGCTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MKDPGKLRGMPLLSGSRWPVRHLPKWRAAVDALFLISIVLFLWPLDPWISSIPAVLWVLLQLLVAPVQRRWAAWPMLFVL
LLFSRSWWLNQMPHPVAAQDGVLVAGALLAGACVAPQRWQLLLRLPLLVLPLLLFEMGAKPWTPNPLAGANQGGYLLGLI
WLLAIAWFRQGNQPHLQRVLAGVATALAAVMVWQTGSRAAFVAAVVSAALLWIQQGIGLGQVCKRGFLLLGFGAAALAAK
QLLRPSSTGIPGIDLSSDTGRLAIAQCYGAIPFSGNNRFLYGVGFDRAGEFCSDPINGGVADHAHNIYLQLFASSGVLGV
FGLFLLLALLVQAWRSAAPVMDPFPLVAGQLALLYTLIQGFLDLSLLHWPVTLVLTGVLLGIPLSWHRASDNQFTQI

Sequences:

>Translated_397_residues
MKDPGKLRGMPLLSGSRWPVRHLPKWRAAVDALFLISIVLFLWPLDPWISSIPAVLWVLLQLLVAPVQRRWAAWPMLFVL
LLFSRSWWLNQMPHPVAAQDGVLVAGALLAGACVAPQRWQLLLRLPLLVLPLLLFEMGAKPWTPNPLAGANQGGYLLGLI
WLLAIAWFRQGNQPHLQRVLAGVATALAAVMVWQTGSRAAFVAAVVSAALLWIQQGIGLGQVCKRGFLLLGFGAAALAAK
QLLRPSSTGIPGIDLSSDTGRLAIAQCYGAIPFSGNNRFLYGVGFDRAGEFCSDPINGGVADHAHNIYLQLFASSGVLGV
FGLFLLLALLVQAWRSAAPVMDPFPLVAGQLALLYTLIQGFLDLSLLHWPVTLVLTGVLLGIPLSWHRASDNQFTQI
>Mature_397_residues
MKDPGKLRGMPLLSGSRWPVRHLPKWRAAVDALFLISIVLFLWPLDPWISSIPAVLWVLLQLLVAPVQRRWAAWPMLFVL
LLFSRSWWLNQMPHPVAAQDGVLVAGALLAGACVAPQRWQLLLRLPLLVLPLLLFEMGAKPWTPNPLAGANQGGYLLGLI
WLLAIAWFRQGNQPHLQRVLAGVATALAAVMVWQTGSRAAFVAAVVSAALLWIQQGIGLGQVCKRGFLLLGFGAAALAAK
QLLRPSSTGIPGIDLSSDTGRLAIAQCYGAIPFSGNNRFLYGVGFDRAGEFCSDPINGGVADHAHNIYLQLFASSGVLGV
FGLFLLLALLVQAWRSAAPVMDPFPLVAGQLALLYTLIQGFLDLSLLHWPVTLVLTGVLLGIPLSWHRASDNQFTQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43047; Mature: 43047

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA