| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241265
Identifier: 148241265
GI number: 148241265
Start: 164053
End: 165183
Strand: Direct
Name: 148241265
Synonym: SynRCC307_0166
Alternate gene names: NA
Gene position: 164053-165183 (Clockwise)
Preceding gene: 148241264
Following gene: 148241270
Centisome position: 7.37
GC content: 44.12
Gene sequence:
>1131_bases ATGGCTAAGCACTTTTGGATTTACACGCACAACTTCACCCATAGCGGCGCCCCTCTGGTGATGGCGTCGGTTGCACGCGA ACTGGCAGCAGCTGGTTGGCGCGAGCAGTTGCGTGTTGTGAGTTGGGGTGGACTGCATGACAGACGCCACTCAACGCTGC AGCACGAATTGACTGTAGAGGGTATCCATTGCCAAGTCCTTGATTTACATCAAAGGCCCCCACATATAAAGCGGAGAGAT CGCTTGCTTTTGAATTCCTTGGCGTTACCTGAAGCTGTTGTTTGTCAGGCTTTAGATTGGTTGTGGGACGGCAAGCTCAG CAGATTAGATTGGTATTGTCATGAGGGTAATCCTGAGGCTTTTTTTTCAGGCCAAAAGTGGCCTGAAAATATAAATCAAG CATTGAACACAGGGAGATTCCGAATGCGAGTGCCATCCCTGAAGGCTCTTCAGGTATATACTAATTGGTTGCATTATAAA GGAGCTGGCTTAGATGTCCAGGCCCCACAGGTTTTGGTTCCAGAACATTTAATAGCCTCAGCATGTAGTGATTTTTCATC TCTCAAAATTCAATTGACGGGTTCAGTTGGATTTGGTCAAAAGGGACATTTATGGATTTTGCAATTGCTTGAGAAAGTGT TAAGTCAATATCCACAAACCACTAAAGTTTTGAGGCCAATTCGCTTAGAATTTATAGGTATAGAAACAGGTCCATACGCT GCTTTGGCAAGAAAAGTTTGTTCTTATGGCGTGAACCTTTTGGGAGAAAACTTTTCCTGGTCTCCTCAAGATTCTCATGA AAATACCTTACGTACGATGGCAAAATCTAATCTGAGCATAAGTTGCTCTCAAGATGAGACATTTTCTCTTGTAAGTGCTG AGTCCATGGCTTTAGGTCAGCCTATTTTGCGTAATGAAACCGGTGGATTCGATGAGCAACTAAATTGTGGAGACTGTGGA TTTAGTTTGGGCCCCCCTTCGCCATATGTTAGTTCATTATGTGTTCAACTTCTTGGCTCGTTGAGGGATCCTCAGACACA TTCGGAGCAGTCTTTTCTCGATAAAAGAAAGCAAGCTCTGAATCGTTATGCTTGCTTTGCCTCATCAAACATAATTAACT GGCTGATTTAG
Upstream 100 bases:
>100_bases TACCACGCTTCCGCGAGTTGTGGAGTACGGAACTCGGAGGCCGCTGGAGCATTGATCCATATGTCTCACGCTGGCGCGAG CTGATGCTGCAGAAGGGTTA
Downstream 100 bases:
>100_bases AAACCAAGACTTGTACGGAAAGTCCAAATCCATCTATTGCTTTCCAGGAGTTCATTCTGTTGAGCAAAGTTTACCCCCCA CGTTAGTCTGATCGGTAAGG
Product: glycosyltransferse
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MAKHFWIYTHNFTHSGAPLVMASVARELAAAGWREQLRVVSWGGLHDRRHSTLQHELTVEGIHCQVLDLHQRPPHIKRRD RLLLNSLALPEAVVCQALDWLWDGKLSRLDWYCHEGNPEAFFSGQKWPENINQALNTGRFRMRVPSLKALQVYTNWLHYK GAGLDVQAPQVLVPEHLIASACSDFSSLKIQLTGSVGFGQKGHLWILQLLEKVLSQYPQTTKVLRPIRLEFIGIETGPYA ALARKVCSYGVNLLGENFSWSPQDSHENTLRTMAKSNLSISCSQDETFSLVSAESMALGQPILRNETGGFDEQLNCGDCG FSLGPPSPYVSSLCVQLLGSLRDPQTHSEQSFLDKRKQALNRYACFASSNIINWLI
Sequences:
>Translated_376_residues MAKHFWIYTHNFTHSGAPLVMASVARELAAAGWREQLRVVSWGGLHDRRHSTLQHELTVEGIHCQVLDLHQRPPHIKRRD RLLLNSLALPEAVVCQALDWLWDGKLSRLDWYCHEGNPEAFFSGQKWPENINQALNTGRFRMRVPSLKALQVYTNWLHYK GAGLDVQAPQVLVPEHLIASACSDFSSLKIQLTGSVGFGQKGHLWILQLLEKVLSQYPQTTKVLRPIRLEFIGIETGPYA ALARKVCSYGVNLLGENFSWSPQDSHENTLRTMAKSNLSISCSQDETFSLVSAESMALGQPILRNETGGFDEQLNCGDCG FSLGPPSPYVSSLCVQLLGSLRDPQTHSEQSFLDKRKQALNRYACFASSNIINWLI >Mature_375_residues AKHFWIYTHNFTHSGAPLVMASVARELAAAGWREQLRVVSWGGLHDRRHSTLQHELTVEGIHCQVLDLHQRPPHIKRRDR LLLNSLALPEAVVCQALDWLWDGKLSRLDWYCHEGNPEAFFSGQKWPENINQALNTGRFRMRVPSLKALQVYTNWLHYKG AGLDVQAPQVLVPEHLIASACSDFSSLKIQLTGSVGFGQKGHLWILQLLEKVLSQYPQTTKVLRPIRLEFIGIETGPYAA LARKVCSYGVNLLGENFSWSPQDSHENTLRTMAKSNLSISCSQDETFSLVSAESMALGQPILRNETGGFDEQLNCGDCGF SLGPPSPYVSSLCVQLLGSLRDPQTHSEQSFLDKRKQALNRYACFASSNIINWLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42246; Mature: 42114
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHFWIYTHNFTHSGAPLVMASVARELAAAGWREQLRVVSWGGLHDRRHSTLQHELTVE CCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHEEEEEECCCCHHHHHHHHHHEEEE GIHCQVLDLHQRPPHIKRRDRLLLNSLALPEAVVCQALDWLWDGKLSRLDWYCHEGNPEA CEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCE FFSGQKWPENINQALNTGRFRMRVPSLKALQVYTNWLHYKGAGLDVQAPQVLVPEHLIAS EECCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHHHH ACSDFSSLKIQLTGSVGFGQKGHLWILQLLEKVLSQYPQTTKVLRPIRLEFIGIETGPYA HHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCEEEEEEEECCCCHH ALARKVCSYGVNLLGENFSWSPQDSHENTLRTMAKSNLSISCSQDETFSLVSAESMALGQ HHHHHHHHHCHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEEEHHHHHHHHCC PILRNETGGFDEQLNCGDCGFSLGPPSPYVSSLCVQLLGSLRDPQTHSEQSFLDKRKQAL CHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH NRYACFASSNIINWLI HHHHHHHCCCHHHHCC >Mature Secondary Structure AKHFWIYTHNFTHSGAPLVMASVARELAAAGWREQLRVVSWGGLHDRRHSTLQHELTVE CCEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHEEEEEECCCCHHHHHHHHHHEEEE GIHCQVLDLHQRPPHIKRRDRLLLNSLALPEAVVCQALDWLWDGKLSRLDWYCHEGNPEA CEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCE FFSGQKWPENINQALNTGRFRMRVPSLKALQVYTNWLHYKGAGLDVQAPQVLVPEHLIAS EECCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHHHH ACSDFSSLKIQLTGSVGFGQKGHLWILQLLEKVLSQYPQTTKVLRPIRLEFIGIETGPYA HHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCEEEEEEEECCCCHH ALARKVCSYGVNLLGENFSWSPQDSHENTLRTMAKSNLSISCSQDETFSLVSAESMALGQ HHHHHHHHHCHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEEEHHHHHHHHCC PILRNETGGFDEQLNCGDCGFSLGPPSPYVSSLCVQLLGSLRDPQTHSEQSFLDKRKQAL CHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH NRYACFASSNIINWLI HHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA