Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

Click here to switch to the map view.

The map label for this gene is 148241262

Identifier: 148241262

GI number: 148241262

Start: 160468

End: 161358

Strand: Direct

Name: 148241262

Synonym: SynRCC307_0163

Alternate gene names: NA

Gene position: 160468-161358 (Clockwise)

Preceding gene: 148241260

Following gene: 148241264

Centisome position: 7.21

GC content: 61.73

Gene sequence:

>891_bases
GTGCCACAGTCTTCCGAGCTGAACTTGAGAACGGTGGGCACGGCGTTGCCTCTGGTGGTGGTCAGTGTTGCCTATCACAG
CCAGAGCTCCCTGGCGAGCCTGGCCGCTGATCTGGGCCGTCATCAAGGCGGCTTAACCCGCTGGATTGTGGTGGATCAGG
CCCCAAAGTCCGCACCGTTGGATCCAGAGCCATTGCGCCGGCACTTGGGCTCGGTCCCGTTGCTGGTGCTCCAGGGGGAG
GAGGGGGATGGCTTTGGGGCAGGTTGCAATCGGGGCTTTGACTATCTGCAGAAAACCGGAAGCAGCGGATGGGTTTGGTT
GCTCAATCCCGACACCTCGTTGCCCCAGGGTGATGAAGCCCGGCGGTTGCTTGAGGCTGTGGCTGATCTGCCAGCTCAGG
CTGTTGTTGGAACCGCTGTGCAGGACGCAACCGGCACCATCGAACCCAGTGCCGGCTGGATTGATCAGGGGCTGAATTTC
CGCCGGCGCAAAGTCAGTACGGCTGATGCGTTGCTGCATGAGCCACTGCGGCTGGATTGGCTCAGTGGCTGCAGCTTGCT
GCTGCGACCCATGGCCCATCAGCCACCTGCCCGTTTTGATCCCTGTTTCCCTCTCTATTACGAAGATATGGATCTGTGTC
TGCGCCTGGCACAGCAGGAGGCCCCTGTGCTCTGGTTGCCGCAGGTAGTGGTCAGCCACCAGAAAGGGGAGGGGAGTGTC
ACCCCGTCGAGTCGCCGAATTGAGCTCTCCACGATCAGTTATTTGCGCTTCTTGCGCCGCCATTGCCCGCCATGGGTGAG
GCTGCTACGGCAACTGCGTTTGTTGCTGTCGGCGTTGCTGCGGCCGCGGCGGGCTGGCGCCATCTGGCGCGGCTTTAAGC
GTTCTGGTTGA

Upstream 100 bases:

>100_bases
GTATTTGCGGTAGGTCTCGGTGTCCTGCAACATCACGCTGACAAAGCCAAGACCCAGTTCTTCGGCCACCTTGCCGTCGT
AATGGCTCATGCGGTGACAG

Downstream 100 bases:

>100_bases
TGGCTTCAACTCGTAGTTCCTTAAGCCGGCTACCGAGCTCGGGGCCCGCCGATAGCCCCTGATTCATGAGCTCCTTGGCG
CTGAGCGGGGATTGGATCAA

Product: glyscosytransferase

Products: NA

Alternate protein names: Glyscosytransferase; Glycosyl Transferase Family Protein; Family 2 Glycosyl Transferase

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MPQSSELNLRTVGTALPLVVVSVAYHSQSSLASLAADLGRHQGGLTRWIVVDQAPKSAPLDPEPLRRHLGSVPLLVLQGE
EGDGFGAGCNRGFDYLQKTGSSGWVWLLNPDTSLPQGDEARRLLEAVADLPAQAVVGTAVQDATGTIEPSAGWIDQGLNF
RRRKVSTADALLHEPLRLDWLSGCSLLLRPMAHQPPARFDPCFPLYYEDMDLCLRLAQQEAPVLWLPQVVVSHQKGEGSV
TPSSRRIELSTISYLRFLRRHCPPWVRLLRQLRLLLSALLRPRRAGAIWRGFKRSG

Sequences:

>Translated_296_residues
MPQSSELNLRTVGTALPLVVVSVAYHSQSSLASLAADLGRHQGGLTRWIVVDQAPKSAPLDPEPLRRHLGSVPLLVLQGE
EGDGFGAGCNRGFDYLQKTGSSGWVWLLNPDTSLPQGDEARRLLEAVADLPAQAVVGTAVQDATGTIEPSAGWIDQGLNF
RRRKVSTADALLHEPLRLDWLSGCSLLLRPMAHQPPARFDPCFPLYYEDMDLCLRLAQQEAPVLWLPQVVVSHQKGEGSV
TPSSRRIELSTISYLRFLRRHCPPWVRLLRQLRLLLSALLRPRRAGAIWRGFKRSG
>Mature_295_residues
PQSSELNLRTVGTALPLVVVSVAYHSQSSLASLAADLGRHQGGLTRWIVVDQAPKSAPLDPEPLRRHLGSVPLLVLQGEE
GDGFGAGCNRGFDYLQKTGSSGWVWLLNPDTSLPQGDEARRLLEAVADLPAQAVVGTAVQDATGTIEPSAGWIDQGLNFR
RRKVSTADALLHEPLRLDWLSGCSLLLRPMAHQPPARFDPCFPLYYEDMDLCLRLAQQEAPVLWLPQVVVSHQKGEGSVT
PSSRRIELSTISYLRFLRRHCPPWVRLLRQLRLLLSALLRPRRAGAIWRGFKRSG

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32681; Mature: 32550

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQSSELNLRTVGTALPLVVVSVAYHSQSSLASLAADLGRHQGGLTRWIVVDQAPKSAPL
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
DPEPLRRHLGSVPLLVLQGEEGDGFGAGCNRGFDYLQKTGSSGWVWLLNPDTSLPQGDEA
CHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHH
RRLLEAVADLPAQAVVGTAVQDATGTIEPSAGWIDQGLNFRRRKVSTADALLHEPLRLDW
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCHHHHH
LSGCSLLLRPMAHQPPARFDPCFPLYYEDMDLCLRLAQQEAPVLWLPQVVVSHQKGEGSV
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHCCCCCCCC
TPSSRRIELSTISYLRFLRRHCPPWVRLLRQLRLLLSALLRPRRAGAIWRGFKRSG
CCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHCCHHHHHHCCCC
>Mature Secondary Structure 
PQSSELNLRTVGTALPLVVVSVAYHSQSSLASLAADLGRHQGGLTRWIVVDQAPKSAPL
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
DPEPLRRHLGSVPLLVLQGEEGDGFGAGCNRGFDYLQKTGSSGWVWLLNPDTSLPQGDEA
CHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHH
RRLLEAVADLPAQAVVGTAVQDATGTIEPSAGWIDQGLNFRRRKVSTADALLHEPLRLDW
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCHHHHH
LSGCSLLLRPMAHQPPARFDPCFPLYYEDMDLCLRLAQQEAPVLWLPQVVVSHQKGEGSV
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHCCCCCCCC
TPSSRRIELSTISYLRFLRRHCPPWVRLLRQLRLLLSALLRPRRAGAIWRGFKRSG
CCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA