Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241264

Identifier: 148241264

GI number: 148241264

Start: 162533

End: 164053

Strand: Direct

Name: 148241264

Synonym: SynRCC307_0165

Alternate gene names: NA

Gene position: 162533-164053 (Clockwise)

Preceding gene: 148241262

Following gene: 148241265

Centisome position: 7.31

GC content: 60.03

Gene sequence:

>1521_bases
ATGCAGACCATGGGCCATGGCAACGGTTGCCAGCCAGTCCATCCATTGCTCGGCAGCGCTGCTGGGGTGCACTACGGTTT
GCCCGGCTTTCGCACGGCTGTGACTTCACCTGCCCAGGGTGACGACTGGTTCAGCAAGTTCAAGCGTTGGCGCCTGGCCA
AGGCGGTGCGATTGATCAAAGAACTGGAGATCTACCGAAATTTTTTTCCTGCTGATCTGATCAGGCAGTGGCTAATCGGC
ATTCAGCCGGGGATTGCGCCACTGCGGCAAAGGCTCAGTCAGCAGGTGGAGTTTGTGCTGTGGCTGCCTCCAGGTTGGCA
ACTCTCCGTTGCGCAACGAAAGCGTTTGCATCGGGTTCTTGTCCGCCGGCAAGCCCGCACGGGCGCCCAGGTGGTGAGTT
GTGATGACTGGCTTCTGCTTCCCACCGGCAAGCGGCTTTGGCGCCAGAAAGGCCGGCTTGATCCGTTATTGGATCGAGCC
ACTGGTGAAGCAGAGGGTCCTTTGTGGATTCAACGCAACTTGCTGCAGCAACTGGGTGAGCCGCCCGAGCAGGTACAAGC
GCGGCCTGCTTGGCGTGCTCACCTTTTTGAGACCGTTGGAGCTGAGGCCTGGGCCCATGTGGCCTTGCCGCTAGCGATCT
CTCCACCGGTTGAGTTGCCACCAGCCCAGCCTGCTCAGCCCAAAGGAAACCCTTTGGTGAGTGTGTTGATTCCATCCGGT
GGGTTTCACAAGCCCATTGGTGGCCGCAACACGATGTTGCTGCGCCATTGCCTCACTTGCCTGTTGCAGCGCAGTGACTA
CCGCGAACTCGAGATTGTTCTGATTGATGGTGGTGAGCTCAGCGCAGCCGAGCTTGAGGAGTTTGAGAATTTGATTGGCT
ATGGGCTAGGCCCAGGTCGCTGGCGCCACGGACGTAGCGACTTGTCCTACAGCTACAGCCAGCGCATCAACCAGGCGGCG
GCTGCAGCTCGCGGAGAGTTTTTATTGCAACTCAACGACGACACCGAGTTGCTGGAGCCAGGGGCCATCGGCTCCATGCT
GGCCCATGCCCAGGAACCCCAGATCGGCGTTGTCGGTGCGTTGTTGCTTTACCCGGGTGGCCGCGTTCAGCACGCCGGCG
TTGCGGTCGACAATCTCGCCCCGCGTCACGCCTGGGTTGGTTGTTGGCCTAACCGTTTACCCCCTGGCTTGCTTGCTGCT
GCGCGTCAATTTCAGGCTGTCACGGCTGCAGTGAGTCTGTGCAGCGCTGAGCTATGGCAACAGCTGGGTGGTCTTCGCAA
TGACCTGCCCATCAACTACGGCGATGTGGATTTCTGCTTGCGGGCGCGGCAGCGCGGCCATGCGGTGGTGCTGGATCCAG
CAAGCCGCTGGACACACTTCGAATCAGCTAGCCGGAGCACCGCCGGAATTCCGCCTGAATTACCACGCTTCCGCGAGTTG
TGGAGTACGGAACTCGGAGGCCGCTGGAGCATTGATCCATATGTCTCACGCTGGCGCGAGCTGATGCTGCAGAAGGGTTA
A

Upstream 100 bases:

>100_bases
CTGGCCAGCTGCACACTCCTTCAACAACCAGATCCAAATCCTTGTCGGGGGTGCTTTTGCCAAGGAGCCGGTCGCGAACA
GCACCACCCACCACGCTGAG

Downstream 100 bases:

>100_bases
TGGCTAAGCACTTTTGGATTTACACGCACAACTTCACCCATAGCGGCGCCCCTCTGGTGATGGCGTCGGTTGCACGCGAA
CTGGCAGCAGCTGGTTGGCG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MQTMGHGNGCQPVHPLLGSAAGVHYGLPGFRTAVTSPAQGDDWFSKFKRWRLAKAVRLIKELEIYRNFFPADLIRQWLIG
IQPGIAPLRQRLSQQVEFVLWLPPGWQLSVAQRKRLHRVLVRRQARTGAQVVSCDDWLLLPTGKRLWRQKGRLDPLLDRA
TGEAEGPLWIQRNLLQQLGEPPEQVQARPAWRAHLFETVGAEAWAHVALPLAISPPVELPPAQPAQPKGNPLVSVLIPSG
GFHKPIGGRNTMLLRHCLTCLLQRSDYRELEIVLIDGGELSAAELEEFENLIGYGLGPGRWRHGRSDLSYSYSQRINQAA
AAARGEFLLQLNDDTELLEPGAIGSMLAHAQEPQIGVVGALLLYPGGRVQHAGVAVDNLAPRHAWVGCWPNRLPPGLLAA
ARQFQAVTAAVSLCSAELWQQLGGLRNDLPINYGDVDFCLRARQRGHAVVLDPASRWTHFESASRSTAGIPPELPRFREL
WSTELGGRWSIDPYVSRWRELMLQKG

Sequences:

>Translated_506_residues
MQTMGHGNGCQPVHPLLGSAAGVHYGLPGFRTAVTSPAQGDDWFSKFKRWRLAKAVRLIKELEIYRNFFPADLIRQWLIG
IQPGIAPLRQRLSQQVEFVLWLPPGWQLSVAQRKRLHRVLVRRQARTGAQVVSCDDWLLLPTGKRLWRQKGRLDPLLDRA
TGEAEGPLWIQRNLLQQLGEPPEQVQARPAWRAHLFETVGAEAWAHVALPLAISPPVELPPAQPAQPKGNPLVSVLIPSG
GFHKPIGGRNTMLLRHCLTCLLQRSDYRELEIVLIDGGELSAAELEEFENLIGYGLGPGRWRHGRSDLSYSYSQRINQAA
AAARGEFLLQLNDDTELLEPGAIGSMLAHAQEPQIGVVGALLLYPGGRVQHAGVAVDNLAPRHAWVGCWPNRLPPGLLAA
ARQFQAVTAAVSLCSAELWQQLGGLRNDLPINYGDVDFCLRARQRGHAVVLDPASRWTHFESASRSTAGIPPELPRFREL
WSTELGGRWSIDPYVSRWRELMLQKG
>Mature_506_residues
MQTMGHGNGCQPVHPLLGSAAGVHYGLPGFRTAVTSPAQGDDWFSKFKRWRLAKAVRLIKELEIYRNFFPADLIRQWLIG
IQPGIAPLRQRLSQQVEFVLWLPPGWQLSVAQRKRLHRVLVRRQARTGAQVVSCDDWLLLPTGKRLWRQKGRLDPLLDRA
TGEAEGPLWIQRNLLQQLGEPPEQVQARPAWRAHLFETVGAEAWAHVALPLAISPPVELPPAQPAQPKGNPLVSVLIPSG
GFHKPIGGRNTMLLRHCLTCLLQRSDYRELEIVLIDGGELSAAELEEFENLIGYGLGPGRWRHGRSDLSYSYSQRINQAA
AAARGEFLLQLNDDTELLEPGAIGSMLAHAQEPQIGVVGALLLYPGGRVQHAGVAVDNLAPRHAWVGCWPNRLPPGLLAA
ARQFQAVTAAVSLCSAELWQQLGGLRNDLPINYGDVDFCLRARQRGHAVVLDPASRWTHFESASRSTAGIPPELPRFREL
WSTELGGRWSIDPYVSRWRELMLQKG

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 56267; Mature: 56267

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTMGHGNGCQPVHPLLGSAAGVHYGLPGFRTAVTSPAQGDDWFSKFKRWRLAKAVRLIK
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ELEIYRNFFPADLIRQWLIGIQPGIAPLRQRLSQQVEFVLWLPPGWQLSVAQRKRLHRVL
HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCEECHHHHHHHHHHH
VRRQARTGAQVVSCDDWLLLPTGKRLWRQKGRLDPLLDRATGEAEGPLWIQRNLLQQLGE
HHHHHHCCCEEEECCCEEEECCCHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCC
PPEQVQARPAWRAHLFETVGAEAWAHVALPLAISPPVELPPAQPAQPKGNPLVSVLIPSG
CHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCC
GFHKPIGGRNTMLLRHCLTCLLQRSDYRELEIVLIDGGELSAAELEEFENLIGYGLGPGR
CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC
WRHGRSDLSYSYSQRINQAAAAARGEFLLQLNDDTELLEPGAIGSMLAHAQEPQIGVVGA
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCHHHHHHHHCCCCCHHHHHH
LLLYPGGRVQHAGVAVDNLAPRHAWVGCWPNRLPPGLLAAARQFQAVTAAVSLCSAELWQ
HHHCCCCCEEECCEEHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGGLRNDLPINYGDVDFCLRARQRGHAVVLDPASRWTHFESASRSTAGIPPELPRFREL
HHCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHH
WSTELGGRWSIDPYVSRWRELMLQKG
HHHCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTMGHGNGCQPVHPLLGSAAGVHYGLPGFRTAVTSPAQGDDWFSKFKRWRLAKAVRLIK
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ELEIYRNFFPADLIRQWLIGIQPGIAPLRQRLSQQVEFVLWLPPGWQLSVAQRKRLHRVL
HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCEECHHHHHHHHHHH
VRRQARTGAQVVSCDDWLLLPTGKRLWRQKGRLDPLLDRATGEAEGPLWIQRNLLQQLGE
HHHHHHCCCEEEECCCEEEECCCHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCC
PPEQVQARPAWRAHLFETVGAEAWAHVALPLAISPPVELPPAQPAQPKGNPLVSVLIPSG
CHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCC
GFHKPIGGRNTMLLRHCLTCLLQRSDYRELEIVLIDGGELSAAELEEFENLIGYGLGPGR
CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC
WRHGRSDLSYSYSQRINQAAAAARGEFLLQLNDDTELLEPGAIGSMLAHAQEPQIGVVGA
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCHHHHHHHHCCCCCHHHHHH
LLLYPGGRVQHAGVAVDNLAPRHAWVGCWPNRLPPGLLAAARQFQAVTAAVSLCSAELWQ
HHHCCCCCEEECCEEHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGGLRNDLPINYGDVDFCLRARQRGHAVVLDPASRWTHFESASRSTAGIPPELPRFREL
HHCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHH
WSTELGGRWSIDPYVSRWRELMLQKG
HHHCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]