Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241260

Identifier: 148241260

GI number: 148241260

Start: 158210

End: 160225

Strand: Direct

Name: 148241260

Synonym: SynRCC307_0161

Alternate gene names: NA

Gene position: 158210-160225 (Clockwise)

Preceding gene: 148241259

Following gene: 148241262

Centisome position: 7.11

GC content: 62.75

Gene sequence:

>2016_bases
TTGAAGCGTTTGTTTTGGCCACTACTGGCTCTGCTCTGGCTGCTGAGCACGGTGTTGGACAGGCGCTGGCTGGCTTTGGA
TCAGCGCTTGCCCTCCTGGGATCAAGCCGACTATCTCAACAGCGCTTTGGACCACGGCCGGGCCTTGGGATTGCTGCCCG
GTGGCAGCTGGCAAGGCTGGTCAGCGCTGCTGGACCATTCCCCCAAGATCCCGCCGCTGGCCTCCTTGGTGAACGGCACG
GTGATGGCGGTTTCAGGCGATAGCCCTGATCAGGCGGCCTGGACCTTGAGCCTTTGGTTTGGTCTTTTGCTGGTGGGCGT
TGCGCTTTGGGGCCGGCAATGGCAAGGCCCTGGGCTTGGTCTGTTGGCGGCTTTGTTTTGTGTTGTGGCTCCGGGGCTGG
CGGAATGGCGTGTCGACTACGTGCTGGAGATTCCCCTCTGTGCGGGGTGCATTTGGGCTCAGTGGTTGTTGGGGCGATGG
CTGCGGCCAAACGGGGCCACCTGGATCGCCGCTCTTTTGGCTGCGCTCGCCATCGCCAGTGCGCTGTTGATTAAGCAAAG
CGCCTTGTTGGTGCTGCTTGGTCCGGCGCTTTGGGCGGTGGTGGTGGGGCTTCAGGAGCGAAAGCGGCGCTGGCAGCTGT
TGGCCTCATTCGGCTTTGTGCTGGCTTTGGTGGCTCCCTGGCTGGGCCACAACCTGATCACCGCCATTGGTGGCACCAAC
CGCGCCACCTTGGAGTCGGCGGCCCGCGAGGGGGATCCCAATGCAACGTCTCTGGCGGGCTGGCTGTGGTACCCCAAGCG
GTTGTCTGGCCTGATCGGTCAGATCCCGTTGATCGGCGGTTTGGCAGGAGCCGTGGTGGCCGCCCGCAGGCCGAGTTGGC
CGCGGGGCGATGGGGCCTGGCTTTGGTTCGTTGTCTTAAGTGGTTGGTTGCTGACCACCCTCAGCCCCAACAAAGATCCC
CGTTATCTCGCTCCATTGCTGCCCTTGCTGGCCTTGTTGTTAGCCCGCACTTGGTTGGTTCTGCTGGCTGTGATGCCAAA
AAGCTGGGGCCAGCCCCTGCTGGGGGTTGGTTTATTGGTTTCAGCTTGGGGAACCGTTCAGACCCGCTTTCAAGGCATTC
TCTGGGCGCCAGTGTTCCCGCAGCCGATCGAGCAGATTGTTGATGCTGCCCAGGGTGCTGACCCCTCAACGGCTCGCACG
CTGATCGTGGTGCCCAGTCGGCCCCAGCTCAATCAACACAGCATCAGTTTTTTGGGGCGCCGCGGCGGCGGCGGCTTGGT
TGGCCGGCAGCTCGGTTCCAGCTCCGCTGACATCCAACCGGCGCTTAAGCAGGCGAAGCAAGTGCTTCTGGCAACAGGTG
ATCAGGGCTCAGTGCGCCGCAGCGCTGAGCAGTTCTCGCAGGCGATTCGCAGCAGTGGTTCTTTTGCACTCCAGCAGCAG
TGGCCGCGTCCTGAGGGGGGCACCTATGAGCTTTGGGCGCGCCGGCCGGAGGCTTCCCAGCCGGTGCCTTTTGAGCAACG
CTTCCCTCAGTTAGCGGCCGGTTTGGCCCTAGGCCCTGCCGGGCTTGATCCAGTGTTTGCAGCTGTGGGTGTTGAGCACC
AGCTCGATGGTCATCGGCTCTATCAGCAGCGGGTGGAGCAACAGGCCACTGCTGCTCTTGCAGCTGATCCGAATGATCGT
CAGGCGCTGTGGAGCCTGGCTCTTCTGAAGGTTCTGCAGAACAGGCCACTAGAGGCTGATCACTGGTTTGAGCGCTTACA
GAAGCTGGAGCCCAAGAGCCCCTGGCCTGCGGCTTATCGGGCTGTGGTGCTCACTGCAGCTGGACGCCTCTGGCAGGCCA
GGGCAGTTGCCGATCAGGCGCAGGGCTTAAATCCATCGCCTGTGCTGGAGGGTTTGGGAGATCTCAGTGGAGTTCTGGGC
GGTCAGCTGTGGCGTCTACCTGCTGCCAGTCGTTCGCTGCCAGCGGCTACGCAGGCGGTTGAGCAGCAGCTCAAGACGCC
GGAATCAGCGCGCTGA

Upstream 100 bases:

>100_bases
CTGTCCCTGAGCAGCAGGCTGGCCCTTGCTTGGCAGCCATGCGATTAGCCGGTTTTTCCCAGGCAGTACGGATCGGAACC
GTCCAAAGCAAGGGGCTGCT

Downstream 100 bases:

>100_bases
GCTTGTCGCGGAAATCGCCTTTGGGCATGCCGCCTTTGAGCTCGCCATGGATTACGAACTCCCCCTCGGGATTAGTCACG
ATCAGGTAGGTCGGCCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MKRLFWPLLALLWLLSTVLDRRWLALDQRLPSWDQADYLNSALDHGRALGLLPGGSWQGWSALLDHSPKIPPLASLVNGT
VMAVSGDSPDQAAWTLSLWFGLLLVGVALWGRQWQGPGLGLLAALFCVVAPGLAEWRVDYVLEIPLCAGCIWAQWLLGRW
LRPNGATWIAALLAALAIASALLIKQSALLVLLGPALWAVVVGLQERKRRWQLLASFGFVLALVAPWLGHNLITAIGGTN
RATLESAAREGDPNATSLAGWLWYPKRLSGLIGQIPLIGGLAGAVVAARRPSWPRGDGAWLWFVVLSGWLLTTLSPNKDP
RYLAPLLPLLALLLARTWLVLLAVMPKSWGQPLLGVGLLVSAWGTVQTRFQGILWAPVFPQPIEQIVDAAQGADPSTART
LIVVPSRPQLNQHSISFLGRRGGGGLVGRQLGSSSADIQPALKQAKQVLLATGDQGSVRRSAEQFSQAIRSSGSFALQQQ
WPRPEGGTYELWARRPEASQPVPFEQRFPQLAAGLALGPAGLDPVFAAVGVEHQLDGHRLYQQRVEQQATAALAADPNDR
QALWSLALLKVLQNRPLEADHWFERLQKLEPKSPWPAAYRAVVLTAAGRLWQARAVADQAQGLNPSPVLEGLGDLSGVLG
GQLWRLPAASRSLPAATQAVEQQLKTPESAR

Sequences:

>Translated_671_residues
MKRLFWPLLALLWLLSTVLDRRWLALDQRLPSWDQADYLNSALDHGRALGLLPGGSWQGWSALLDHSPKIPPLASLVNGT
VMAVSGDSPDQAAWTLSLWFGLLLVGVALWGRQWQGPGLGLLAALFCVVAPGLAEWRVDYVLEIPLCAGCIWAQWLLGRW
LRPNGATWIAALLAALAIASALLIKQSALLVLLGPALWAVVVGLQERKRRWQLLASFGFVLALVAPWLGHNLITAIGGTN
RATLESAAREGDPNATSLAGWLWYPKRLSGLIGQIPLIGGLAGAVVAARRPSWPRGDGAWLWFVVLSGWLLTTLSPNKDP
RYLAPLLPLLALLLARTWLVLLAVMPKSWGQPLLGVGLLVSAWGTVQTRFQGILWAPVFPQPIEQIVDAAQGADPSTART
LIVVPSRPQLNQHSISFLGRRGGGGLVGRQLGSSSADIQPALKQAKQVLLATGDQGSVRRSAEQFSQAIRSSGSFALQQQ
WPRPEGGTYELWARRPEASQPVPFEQRFPQLAAGLALGPAGLDPVFAAVGVEHQLDGHRLYQQRVEQQATAALAADPNDR
QALWSLALLKVLQNRPLEADHWFERLQKLEPKSPWPAAYRAVVLTAAGRLWQARAVADQAQGLNPSPVLEGLGDLSGVLG
GQLWRLPAASRSLPAATQAVEQQLKTPESAR
>Mature_671_residues
MKRLFWPLLALLWLLSTVLDRRWLALDQRLPSWDQADYLNSALDHGRALGLLPGGSWQGWSALLDHSPKIPPLASLVNGT
VMAVSGDSPDQAAWTLSLWFGLLLVGVALWGRQWQGPGLGLLAALFCVVAPGLAEWRVDYVLEIPLCAGCIWAQWLLGRW
LRPNGATWIAALLAALAIASALLIKQSALLVLLGPALWAVVVGLQERKRRWQLLASFGFVLALVAPWLGHNLITAIGGTN
RATLESAAREGDPNATSLAGWLWYPKRLSGLIGQIPLIGGLAGAVVAARRPSWPRGDGAWLWFVVLSGWLLTTLSPNKDP
RYLAPLLPLLALLLARTWLVLLAVMPKSWGQPLLGVGLLVSAWGTVQTRFQGILWAPVFPQPIEQIVDAAQGADPSTART
LIVVPSRPQLNQHSISFLGRRGGGGLVGRQLGSSSADIQPALKQAKQVLLATGDQGSVRRSAEQFSQAIRSSGSFALQQQ
WPRPEGGTYELWARRPEASQPVPFEQRFPQLAAGLALGPAGLDPVFAAVGVEHQLDGHRLYQQRVEQQATAALAADPNDR
QALWSLALLKVLQNRPLEADHWFERLQKLEPKSPWPAAYRAVVLTAAGRLWQARAVADQAQGLNPSPVLEGLGDLSGVLG
GQLWRLPAASRSLPAATQAVEQQLKTPESAR

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72634; Mature: 72634

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLFWPLLALLWLLSTVLDRRWLALDQRLPSWDQADYLNSALDHGRALGLLPGGSWQGW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCHH
SALLDHSPKIPPLASLVNGTVMAVSGDSPDQAAWTLSLWFGLLLVGVALWGRQWQGPGLG
HHHHCCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LLAALFCVVAPGLAEWRVDYVLEIPLCAGCIWAQWLLGRWLRPNGATWIAALLAALAIAS
HHHHHHHHHCCCHHHHHHHHEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ALLIKQSALLVLLGPALWAVVVGLQERKRRWQLLASFGFVLALVAPWLGHNLITAIGGTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
RATLESAAREGDPNATSLAGWLWYPKRLSGLIGQIPLIGGLAGAVVAARRPSWPRGDGAW
HHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
LWFVVLSGWLLTTLSPNKDPRYLAPLLPLLALLLARTWLVLLAVMPKSWGQPLLGVGLLV
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SAWGTVQTRFQGILWAPVFPQPIEQIVDAAQGADPSTARTLIVVPSRPQLNQHSISFLGR
HHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHC
RGGGGLVGRQLGSSSADIQPALKQAKQVLLATGDQGSVRRSAEQFSQAIRSSGSFALQQQ
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEHHHC
WPRPEGGTYELWARRPEASQPVPFEQRFPQLAAGLALGPAGLDPVFAAVGVEHQLDGHRL
CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHCCCHHHH
YQQRVEQQATAALAADPNDRQALWSLALLKVLQNRPLEADHWFERLQKLEPKSPWPAAYR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH
AVVLTAAGRLWQARAVADQAQGLNPSPVLEGLGDLSGVLGGQLWRLPAASRSLPAATQAV
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHHH
EQQLKTPESAR
HHHHCCCCCCC
>Mature Secondary Structure
MKRLFWPLLALLWLLSTVLDRRWLALDQRLPSWDQADYLNSALDHGRALGLLPGGSWQGW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCHH
SALLDHSPKIPPLASLVNGTVMAVSGDSPDQAAWTLSLWFGLLLVGVALWGRQWQGPGLG
HHHHCCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LLAALFCVVAPGLAEWRVDYVLEIPLCAGCIWAQWLLGRWLRPNGATWIAALLAALAIAS
HHHHHHHHHCCCHHHHHHHHEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ALLIKQSALLVLLGPALWAVVVGLQERKRRWQLLASFGFVLALVAPWLGHNLITAIGGTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
RATLESAAREGDPNATSLAGWLWYPKRLSGLIGQIPLIGGLAGAVVAARRPSWPRGDGAW
HHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
LWFVVLSGWLLTTLSPNKDPRYLAPLLPLLALLLARTWLVLLAVMPKSWGQPLLGVGLLV
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SAWGTVQTRFQGILWAPVFPQPIEQIVDAAQGADPSTARTLIVVPSRPQLNQHSISFLGR
HHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHC
RGGGGLVGRQLGSSSADIQPALKQAKQVLLATGDQGSVRRSAEQFSQAIRSSGSFALQQQ
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEHHHC
WPRPEGGTYELWARRPEASQPVPFEQRFPQLAAGLALGPAGLDPVFAAVGVEHQLDGHRL
CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHCCCHHHH
YQQRVEQQATAALAADPNDRQALWSLALLKVLQNRPLEADHWFERLQKLEPKSPWPAAYR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH
AVVLTAAGRLWQARAVADQAQGLNPSPVLEGLGDLSGVLGGQLWRLPAASRSLPAATQAV
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHHH
EQQLKTPESAR
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA