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The map label for this gene is selD [H]

Identifier: 148241259

GI number: 148241259

Start: 156171

End: 158213

Strand: Direct

Name: selD [H]

Synonym: SynRCC307_0160

Alternate gene names: 148241259

Gene position: 156171-158213 (Clockwise)

Preceding gene: 148241258

Following gene: 148241260

Centisome position: 7.02

GC content: 64.07

Gene sequence:

>2043_bases
ATGGCAGCAGGCCAACCCCACCGGCTACCGGTGAGCCATCTGCTGCTGGCCGGAGGAGGCCATAGCCATGCCCTGTTGCT
GCGGCAATGGGCGATGCGGCCGTCCACGCGGCCTGCGGTTGAGGCCATCACGTTGGTGAGTGCTCAGCCCACCAGCCTGT
ATTCCGGCTTGATCCCTGCATGCATCAGTGGTGCTCTTGCGCCTAAGGCTTGTGTCCTTGACGTCTGGGGCCTTTGCCGG
GCCGCAGCGGTCAGCTTTGTGCAGGCCACGGTCACTGGCTTGGACACCGCCAACCGGCAGCTCAGCCTCAAAGGTGATCG
CCCGCCTCTGGCTTACGACTGGCTCAGCCTCAACCTGGGTGCTGAAGTCAGGGCACCCAAGCGGCTTGGCTGCCTACCGA
TCAAGCCGCTCGAGCCGGTGTTGGCTGCACTCGCGGCTTTGCCACTGGGTGCTGCCGTGCGGGTGGTGGGCAGTGGTCCT
GCGGCGGTGGAAGTCAGTTTGGCTCTCGCTGCTCGTGGTTTTGCCGTCAACCTGTCGGGACAGCCAGAGCGTGCTTTCTG
GCAGGGCTTCAGGGACTCCCTGAATGCGGCAGGAGTGGTTTTGGATCCTTCGCTCATGCGTGCTCATGTGGAACTTGAGC
TCCATTGCACGGGCAGCTGGGGCCCGAGTTGGCTTGCTCAAAGCGGCCTGGCCGTAGACGGCCGCGGCCGCGTGCTCACC
GGAGCTGATTTGCGTTCGGTGAATGACAGCTCCGTGTTTGCTTCAGGTGACTGCGGTGTGATTGATGGCCGCGAGCGGCC
CCCCAGTGGTGTTTGGGCGGTGAGAGCAGCCCCCGTTTTGGCAGCCAACTTGCAGCGTGCTGTTTCGCGTCGCCGTTTAC
GGCGCTGGCGCCCGCAACCCCATGCCCTGCAATTGCTGGGCGATGGTCGCGGCCGTGCTTGGGCCCTATGGGCAGGTAGG
CAGCTCGGCCCCAGCCGCCGGATTTGGCGCTGGAAACAACACCTCGATCAGCGCTTTATGGCGATGCTGCGCCCGCCCCA
AATGGCCAGCGATCAGCCCATGGCCTGCAGTGGTTGCGCCGCCAAGCTTGCTGATGCGCCCTTGCGCGGGGCCCTGCAGC
AGTTGGCTGGTGGCCAGCTGCCTCCTGCGGAGGATGCTGCGGTGGCTGGTGATGGTTGGCTGCAGAGCGTGGATGGGTTT
CCGGCTCTTGTGGCAGACCCTTATCTCAATGGACGCCTAACGGCTCTGCATGCCAGCTCGGATCTCTGGGCTTGCGGGGC
GTCGCTGCGCCATGGCCAGGCGCTTGTCACCTTGCCCCGATGTTCTGAGCTCCTGCAGCAGGAGCTGCTCGTTCAGAGCC
TGGCGGGGGTGCAATCGGTGATGCCGCTGATTGGCGGGCACACCTTGCAGGCGCTGGAGGCCAGCGATCCCAGCAAGCCT
TTGGCCAAACAGCTCAGCCTGGGCTTGGTGGTCAACGGTCAGCTCTCTCCCGGCCAGCTCAGCTGGGGCAAGGGACCGCT
CAGGCCTGGTCATGTGTTGCTGCTCAGCCGGCCGATTGGAACAGGCGTGCTCTTCGCAGCAGCCCAGGCTGGTTCGGCGG
AGCCCCAATGGCTGATAGCTGCATTGGAGGTGATGCAACAGAGCCAGGCGCCGCTGGTTGAGCTTTTGGCTGCCCATGGC
TGCAGCGCTTGCACCGATGTGACAGGGTTTGGCCTCTTGGGCCATCTCAACGAGATGCTCGATGCCTCAATGGGGGTGGA
TGTGCAGCTGCAGGCTGATCAAGTGCCGGCTTTGGCTGGATCCTTGGAGCTCCTGGAGGCAGGAATCACCAGCACCTTGG
CCCCCAGCAATGCTGTTGCGCTGGCGAGGTGGCCAGAGCTGTTGGGAACCCGCGCGCGGTTGTTGATTGATCCGCAGACC
TGCGGGCCTTTGCTAGCTGCTGTCCCTGAGCAGCAGGCTGGCCCTTGCTTGGCAGCCATGCGATTAGCCGGTTTTTCCCA
GGCAGTACGGATCGGAACCGTCCAAAGCAAGGGGCTGCTTTGA

Upstream 100 bases:

>100_bases
GGGATGCGGCCAGCACCGTTGCTGATCCTGGTTTGGCTAAAGAGCTTTTGGGATGGAGCACCAAGCGAGGCCTTGAGGAA
TGCTGCCGTGATGGCTGGGC

Downstream 100 bases:

>100_bases
AGCGTTTGTTTTGGCCACTACTGGCTCTGCTCTGGCTGCTGAGCACGGTGTTGGACAGGCGCTGGCTGGCTTTGGATCAG
CGCTTGCCCTCCTGGGATCA

Product: selenophosphate synthase/FAD/NAD(P)-binding domain-containing protein

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 680; Mature: 679

Protein sequence:

>680_residues
MAAGQPHRLPVSHLLLAGGGHSHALLLRQWAMRPSTRPAVEAITLVSAQPTSLYSGLIPACISGALAPKACVLDVWGLCR
AAAVSFVQATVTGLDTANRQLSLKGDRPPLAYDWLSLNLGAEVRAPKRLGCLPIKPLEPVLAALAALPLGAAVRVVGSGP
AAVEVSLALAARGFAVNLSGQPERAFWQGFRDSLNAAGVVLDPSLMRAHVELELHCTGSWGPSWLAQSGLAVDGRGRVLT
GADLRSVNDSSVFASGDCGVIDGRERPPSGVWAVRAAPVLAANLQRAVSRRRLRRWRPQPHALQLLGDGRGRAWALWAGR
QLGPSRRIWRWKQHLDQRFMAMLRPPQMASDQPMACSGCAAKLADAPLRGALQQLAGGQLPPAEDAAVAGDGWLQSVDGF
PALVADPYLNGRLTALHASSDLWACGASLRHGQALVTLPRCSELLQQELLVQSLAGVQSVMPLIGGHTLQALEASDPSKP
LAKQLSLGLVVNGQLSPGQLSWGKGPLRPGHVLLLSRPIGTGVLFAAAQAGSAEPQWLIAALEVMQQSQAPLVELLAAHG
CSACTDVTGFGLLGHLNEMLDASMGVDVQLQADQVPALAGSLELLEAGITSTLAPSNAVALARWPELLGTRARLLIDPQT
CGPLLAAVPEQQAGPCLAAMRLAGFSQAVRIGTVQSKGLL

Sequences:

>Translated_680_residues
MAAGQPHRLPVSHLLLAGGGHSHALLLRQWAMRPSTRPAVEAITLVSAQPTSLYSGLIPACISGALAPKACVLDVWGLCR
AAAVSFVQATVTGLDTANRQLSLKGDRPPLAYDWLSLNLGAEVRAPKRLGCLPIKPLEPVLAALAALPLGAAVRVVGSGP
AAVEVSLALAARGFAVNLSGQPERAFWQGFRDSLNAAGVVLDPSLMRAHVELELHCTGSWGPSWLAQSGLAVDGRGRVLT
GADLRSVNDSSVFASGDCGVIDGRERPPSGVWAVRAAPVLAANLQRAVSRRRLRRWRPQPHALQLLGDGRGRAWALWAGR
QLGPSRRIWRWKQHLDQRFMAMLRPPQMASDQPMACSGCAAKLADAPLRGALQQLAGGQLPPAEDAAVAGDGWLQSVDGF
PALVADPYLNGRLTALHASSDLWACGASLRHGQALVTLPRCSELLQQELLVQSLAGVQSVMPLIGGHTLQALEASDPSKP
LAKQLSLGLVVNGQLSPGQLSWGKGPLRPGHVLLLSRPIGTGVLFAAAQAGSAEPQWLIAALEVMQQSQAPLVELLAAHG
CSACTDVTGFGLLGHLNEMLDASMGVDVQLQADQVPALAGSLELLEAGITSTLAPSNAVALARWPELLGTRARLLIDPQT
CGPLLAAVPEQQAGPCLAAMRLAGFSQAVRIGTVQSKGLL
>Mature_679_residues
AAGQPHRLPVSHLLLAGGGHSHALLLRQWAMRPSTRPAVEAITLVSAQPTSLYSGLIPACISGALAPKACVLDVWGLCRA
AAVSFVQATVTGLDTANRQLSLKGDRPPLAYDWLSLNLGAEVRAPKRLGCLPIKPLEPVLAALAALPLGAAVRVVGSGPA
AVEVSLALAARGFAVNLSGQPERAFWQGFRDSLNAAGVVLDPSLMRAHVELELHCTGSWGPSWLAQSGLAVDGRGRVLTG
ADLRSVNDSSVFASGDCGVIDGRERPPSGVWAVRAAPVLAANLQRAVSRRRLRRWRPQPHALQLLGDGRGRAWALWAGRQ
LGPSRRIWRWKQHLDQRFMAMLRPPQMASDQPMACSGCAAKLADAPLRGALQQLAGGQLPPAEDAAVAGDGWLQSVDGFP
ALVADPYLNGRLTALHASSDLWACGASLRHGQALVTLPRCSELLQQELLVQSLAGVQSVMPLIGGHTLQALEASDPSKPL
AKQLSLGLVVNGQLSPGQLSWGKGPLRPGHVLLLSRPIGTGVLFAAAQAGSAEPQWLIAALEVMQQSQAPLVELLAAHGC
SACTDVTGFGLLGHLNEMLDASMGVDVQLQADQVPALAGSLELLEAGITSTLAPSNAVALARWPELLGTRARLLIDPQTC
GPLLAAVPEQQAGPCLAAMRLAGFSQAVRIGTVQSKGLL

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG1252

COG function: function code C; NADH dehydrogenase, FAD-containing subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788062, Length=316, Percent_Identity=30.379746835443, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 71160; Mature: 71029

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAGQPHRLPVSHLLLAGGGHSHALLLRQWAMRPSTRPAVEAITLVSAQPTSLYSGLIPA
CCCCCCCCCCHHHHEEECCCCHHHHHHHHHHCCCCCCCHHHEEEEECCCCHHHHHHHHHH
CISGALAPKACVLDVWGLCRAAAVSFVQATVTGLDTANRQLSLKGDRPPLAYDWLSLNLG
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEECCC
AEVRAPKRLGCLPIKPLEPVLAALAALPLGAAVRVVGSGPAAVEVSLALAARGFAVNLSG
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEEECCEEEECCC
QPERAFWQGFRDSLNAAGVVLDPSLMRAHVELELHCTGSWGPSWLAQSGLAVDGRGRVLT
CCCHHHHHHHHHCCCCCCEEECHHHHEEEEEEEEEECCCCCHHHHHHCCCEECCCCCEEE
GADLRSVNDSSVFASGDCGVIDGRERPPSGVWAVRAAPVLAANLQRAVSRRRLRRWRPQP
CCCCCCCCCCCEEECCCCCEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
HALQLLGDGRGRAWALWAGRQLGPSRRIWRWKQHLDQRFMAMLRPPQMASDQPMACSGCA
CEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
AKLADAPLRGALQQLAGGQLPPAEDAAVAGDGWLQSVDGFPALVADPYLNGRLTALHASS
HHHHCCHHHHHHHHHHCCCCCCCCCCEECCCHHHHHCCCCCCCCCCCCCCCEEEEEECCC
DLWACGASLRHGQALVTLPRCSELLQQELLVQSLAGVQSVMPLIGGHTLQALEASDPSKP
CHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH
LAKQLSLGLVVNGQLSPGQLSWGKGPLRPGHVLLLSRPIGTGVLFAAAQAGSAEPQWLIA
HHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHH
ALEVMQQSQAPLVELLAAHGCSACTDVTGFGLLGHLNEMLDASMGVDVQLQADQVPALAG
HHHHHHHCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH
SLELLEAGITSTLAPSNAVALARWPELLGTRARLLIDPQTCGPLLAAVPEQQAGPCLAAM
HHHHHHHCHHHCCCCCCCEEHHHCHHHHCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHH
RLAGFSQAVRIGTVQSKGLL
HHHCCHHHHEEEECCCCCCC
>Mature Secondary Structure 
AAGQPHRLPVSHLLLAGGGHSHALLLRQWAMRPSTRPAVEAITLVSAQPTSLYSGLIPA
CCCCCCCCCHHHHEEECCCCHHHHHHHHHHCCCCCCCHHHEEEEECCCCHHHHHHHHHH
CISGALAPKACVLDVWGLCRAAAVSFVQATVTGLDTANRQLSLKGDRPPLAYDWLSLNLG
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEECCC
AEVRAPKRLGCLPIKPLEPVLAALAALPLGAAVRVVGSGPAAVEVSLALAARGFAVNLSG
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEEECCEEEECCC
QPERAFWQGFRDSLNAAGVVLDPSLMRAHVELELHCTGSWGPSWLAQSGLAVDGRGRVLT
CCCHHHHHHHHHCCCCCCEEECHHHHEEEEEEEEEECCCCCHHHHHHCCCEECCCCCEEE
GADLRSVNDSSVFASGDCGVIDGRERPPSGVWAVRAAPVLAANLQRAVSRRRLRRWRPQP
CCCCCCCCCCCEEECCCCCEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
HALQLLGDGRGRAWALWAGRQLGPSRRIWRWKQHLDQRFMAMLRPPQMASDQPMACSGCA
CEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
AKLADAPLRGALQQLAGGQLPPAEDAAVAGDGWLQSVDGFPALVADPYLNGRLTALHASS
HHHHCCHHHHHHHHHHCCCCCCCCCCEECCCHHHHHCCCCCCCCCCCCCCCEEEEEECCC
DLWACGASLRHGQALVTLPRCSELLQQELLVQSLAGVQSVMPLIGGHTLQALEASDPSKP
CHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH
LAKQLSLGLVVNGQLSPGQLSWGKGPLRPGHVLLLSRPIGTGVLFAAAQAGSAEPQWLIA
HHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHH
ALEVMQQSQAPLVELLAAHGCSACTDVTGFGLLGHLNEMLDASMGVDVQLQADQVPALAG
HHHHHHHCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH
SLELLEAGITSTLAPSNAVALARWPELLGTRARLLIDPQTCGPLLAAVPEQQAGPCLAAM
HHHHHHHCHHHCCCCCCCEEHHHCHHHHCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHH
RLAGFSQAVRIGTVQSKGLL
HHHCCHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA