| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241255
Identifier: 148241255
GI number: 148241255
Start: 150943
End: 151935
Strand: Direct
Name: 148241255
Synonym: SynRCC307_0156
Alternate gene names: NA
Gene position: 150943-151935 (Clockwise)
Preceding gene: 148241254
Following gene: 148241256
Centisome position: 6.78
GC content: 64.45
Gene sequence:
>993_bases TTGCGTTTTTTGGTCCCCGGCACCGGGGACCGTTTCCGTTGTGGGGGCTTATCCGTTGAGCTGCAGAGCGCTCGCCTTTG CGAGGGCTTGGCCCCCAGTGTTGAGGTGGTCACCTACCGGCGGCGCGAGCCTGGTCGGCCTTTCCTCTCTGATCTGCTGA AGCAGGAACGATCACCTGGTGAAGCCCTCTGGTTGGTGAGTTGGGGTTTTCATGTGCCCGAGCTGCTGCGGCAGTTGCGG GGCCGGCCTGTGGCTTATCACGCCCATAGCAGTGGCTATGGCTTTGATCTGCCAGCAGGGGTGCCGGTGTTGGCGGTGAG CCGCAACACCCTGGGCTACTGGGGCGACCGGGCGCCCCGTGCACCCTTGCAATGGGTGCCCAATGCCATCGATTCAGGCT TTGGCGGGGGCACCGGAGAGCGCCCCATTGATGTGCTGGTGCAGGTCCGCAAGAGCAGTGCCTATGTGCGTGAGCAGCTG CTGCCAGCCCTGCGGCAGCGCGGCTTGCAGGTGGAACTGCAGCAGGGCTGGGTGGATGATCTTGGCGATTTGTTTCGCAG CGCCAAGGTGGTGCTCTACGACTCGGCCGATCACTGGCGCCGCGCGGGGGTGAGTGAGGGCTTTGGTCTGCCGCCCATCG AAGCTCTGGCTTGCGGCTGCGTGGTGTTCAGCAGCTTCAACCACGCTCTGGCTGACACCCTGGACCCAGGGCATCTGGCC TGGCAGATCGGCCGCGGAACTCTGAGCGCTGATCTCGATCGCATCACAGCGGCTGCGCGAGCTACCCAGCAATGGCTGCC TGAACCTGCGTTGCTGCAGCGTTTGTTGGCTAGCCACAGCGAATCCGCTGTCCGTCAGCGCTGGCGCGAGGCGTTGGAGG TGGTGAATGACCATTGGGATCGTGTTGTTAGCGGAGAGCAGCCGCTAAAGGCCCTCTCTCCTTGGCGTTTGCGCTGGGGC CGGCGGCTCAGCCGGTTGCGTCGCCGCAGCTGA
Upstream 100 bases:
>100_bases TGGCGGCCATCGGCAAGGTGCTGTTTGGCTTCCTCACCCGCCGTCAGCGCACCGGCAGCACTGAGGAGCCTGTGGCTGCC TGACTGTGAGTCAGCGCCCG
Downstream 100 bases:
>100_bases GTTGCCGCGCCGGCCATAGGGTTTGGCTGTGAAACCCCACCTCAATGACATGACCGGCCCGCTGGGCTGGATCCGGCGCC GGAGTCAGACGCTGGATTTG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MRFLVPGTGDRFRCGGLSVELQSARLCEGLAPSVEVVTYRRREPGRPFLSDLLKQERSPGEALWLVSWGFHVPELLRQLR GRPVAYHAHSSGYGFDLPAGVPVLAVSRNTLGYWGDRAPRAPLQWVPNAIDSGFGGGTGERPIDVLVQVRKSSAYVREQL LPALRQRGLQVELQQGWVDDLGDLFRSAKVVLYDSADHWRRAGVSEGFGLPPIEALACGCVVFSSFNHALADTLDPGHLA WQIGRGTLSADLDRITAAARATQQWLPEPALLQRLLASHSESAVRQRWREALEVVNDHWDRVVSGEQPLKALSPWRLRWG RRLSRLRRRS
Sequences:
>Translated_330_residues MRFLVPGTGDRFRCGGLSVELQSARLCEGLAPSVEVVTYRRREPGRPFLSDLLKQERSPGEALWLVSWGFHVPELLRQLR GRPVAYHAHSSGYGFDLPAGVPVLAVSRNTLGYWGDRAPRAPLQWVPNAIDSGFGGGTGERPIDVLVQVRKSSAYVREQL LPALRQRGLQVELQQGWVDDLGDLFRSAKVVLYDSADHWRRAGVSEGFGLPPIEALACGCVVFSSFNHALADTLDPGHLA WQIGRGTLSADLDRITAAARATQQWLPEPALLQRLLASHSESAVRQRWREALEVVNDHWDRVVSGEQPLKALSPWRLRWG RRLSRLRRRS >Mature_330_residues MRFLVPGTGDRFRCGGLSVELQSARLCEGLAPSVEVVTYRRREPGRPFLSDLLKQERSPGEALWLVSWGFHVPELLRQLR GRPVAYHAHSSGYGFDLPAGVPVLAVSRNTLGYWGDRAPRAPLQWVPNAIDSGFGGGTGERPIDVLVQVRKSSAYVREQL LPALRQRGLQVELQQGWVDDLGDLFRSAKVVLYDSADHWRRAGVSEGFGLPPIEALACGCVVFSSFNHALADTLDPGHLA WQIGRGTLSADLDRITAAARATQQWLPEPALLQRLLASHSESAVRQRWREALEVVNDHWDRVVSGEQPLKALSPWRLRWG RRLSRLRRRS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36853; Mature: 36853
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLVPGTGDRFRCGGLSVELQSARLCEGLAPSVEVVTYRRREPGRPFLSDLLKQERSPG CEEECCCCCCCEEECCCEEEEHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCC EALWLVSWGFHVPELLRQLRGRPVAYHAHSSGYGFDLPAGVPVLAVSRNTLGYWGDRAPR CEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC APLQWVPNAIDSGFGGGTGERPIDVLVQVRKSSAYVREQLLPALRQRGLQVELQQGWVDD CCHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHCCHHH LGDLFRSAKVVLYDSADHWRRAGVSEGFGLPPIEALACGCVVFSSFNHALADTLDPGHLA HHHHHHCCEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE WQIGRGTLSADLDRITAAARATQQWLPEPALLQRLLASHSESAVRQRWREALEVVNDHWD EEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RVVSGEQPLKALSPWRLRWGRRLSRLRRRS HHHCCCCCHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRFLVPGTGDRFRCGGLSVELQSARLCEGLAPSVEVVTYRRREPGRPFLSDLLKQERSPG CEEECCCCCCCEEECCCEEEEHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCC EALWLVSWGFHVPELLRQLRGRPVAYHAHSSGYGFDLPAGVPVLAVSRNTLGYWGDRAPR CEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC APLQWVPNAIDSGFGGGTGERPIDVLVQVRKSSAYVREQLLPALRQRGLQVELQQGWVDD CCHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHCCHHH LGDLFRSAKVVLYDSADHWRRAGVSEGFGLPPIEALACGCVVFSSFNHALADTLDPGHLA HHHHHHCCEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE WQIGRGTLSADLDRITAAARATQQWLPEPALLQRLLASHSESAVRQRWREALEVVNDHWD EEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RVVSGEQPLKALSPWRLRWGRRLSRLRRRS HHHCCCCCHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA