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The map label for this gene is ho1 [H]

Identifier: 148241254

GI number: 148241254

Start: 150209

End: 150925

Strand: Direct

Name: ho1 [H]

Synonym: SynRCC307_0155

Alternate gene names: 148241254

Gene position: 150209-150925 (Clockwise)

Preceding gene: 148241253

Following gene: 148241255

Centisome position: 6.75

GC content: 57.88

Gene sequence:

>717_bases
ATGGCTGTTGCCCTCGCTGCCCAGCTCCGTGAAGGGACAAAGAAATCCCACACGATGGCGGAGAACACTGGTTTTGTGAG
CTGCTTCCTCAAGGGAGTGGTCGACAAGCTCAGCTACCGCAAGTTGGTGGCTGACCTCTATTTCGTCTACGAGGCGATGG
AGGAAGAAATGCATCGCCTCAAAGACCATCCCGTGTTGGCGCCGATCGCCTTTGAGCAGCTCGACCGCCGTCAGGCGCTT
GAGGAAGATCTCACCTTCTACTTCGGTGCCGACTGGCGCAACCAAGTGGAAACTTCGCCGGCGGCCAAGGAATACGTTGC
CCGCATTCGCGAGATTGCCCAGAGCTCTCCCGAACTGCTGGTGGGTCACCACTACACCCGCTATTTGGGTGATCTCTCCG
GCGGCCAGATCCTCAAGACCATTGCCCAAAAGGCGATGAACAACCCCACCGATGACGGGCTGCACTTTTATGTGTTCCCC
CAGATTGAGGACGAGAAAGCTTTTAAGACCACCTATCGCTCAGCGATGGATGAGCTGCCGATCGATCAACCGATGGCTGA
TCGCATCGTGGAAGAGGCCAACCACGCCTTCCACCTCAACATGAAGATGTTCCAGGAGCTGGAAGGCAACTTGGTGGCGG
CCATCGGCAAGGTGCTGTTTGGCTTCCTCACCCGCCGTCAGCGCACCGGCAGCACTGAGGAGCCTGTGGCTGCCTGA

Upstream 100 bases:

>100_bases
GCGAACTGGTTGGACCGCTGCCGTAACCCTTCGCAACCAGATTGCCCCTGATCCCAGTCATGGCGCTTACGTTGGAAAAC
TGTTAACCGCGCCTGGCCCC

Downstream 100 bases:

>100_bases
CTGTGAGTCAGCGCCCGTTGCGTTTTTTGGTCCCCGGCACCGGGGACCGTTTCCGTTGTGGGGGCTTATCCGTTGAGCTG
CAGAGCGCTCGCCTTTGCGA

Product: Heme oxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MAVALAAQLREGTKKSHTMAENTGFVSCFLKGVVDKLSYRKLVADLYFVYEAMEEEMHRLKDHPVLAPIAFEQLDRRQAL
EEDLTFYFGADWRNQVETSPAAKEYVARIREIAQSSPELLVGHHYTRYLGDLSGGQILKTIAQKAMNNPTDDGLHFYVFP
QIEDEKAFKTTYRSAMDELPIDQPMADRIVEEANHAFHLNMKMFQELEGNLVAAIGKVLFGFLTRRQRTGSTEEPVAA

Sequences:

>Translated_238_residues
MAVALAAQLREGTKKSHTMAENTGFVSCFLKGVVDKLSYRKLVADLYFVYEAMEEEMHRLKDHPVLAPIAFEQLDRRQAL
EEDLTFYFGADWRNQVETSPAAKEYVARIREIAQSSPELLVGHHYTRYLGDLSGGQILKTIAQKAMNNPTDDGLHFYVFP
QIEDEKAFKTTYRSAMDELPIDQPMADRIVEEANHAFHLNMKMFQELEGNLVAAIGKVLFGFLTRRQRTGSTEEPVAA
>Mature_237_residues
AVALAAQLREGTKKSHTMAENTGFVSCFLKGVVDKLSYRKLVADLYFVYEAMEEEMHRLKDHPVLAPIAFEQLDRRQALE
EDLTFYFGADWRNQVETSPAAKEYVARIREIAQSSPELLVGHHYTRYLGDLSGGQILKTIAQKAMNNPTDDGLHFYVFPQ
IEDEKAFKTTYRSAMDELPIDQPMADRIVEEANHAFHLNMKMFQELEGNLVAAIGKVLFGFLTRRQRTGSTEEPVAA

Specific function: Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae [H]

COG id: COG5398

COG function: function code P; Heme oxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme oxygenase family [H]

Homologues:

Organism=Homo sapiens, GI187761311, Length=206, Percent_Identity=49.0291262135922, Blast_Score=208, Evalue=3e-54,
Organism=Homo sapiens, GI187761309, Length=206, Percent_Identity=49.0291262135922, Blast_Score=208, Evalue=3e-54,
Organism=Homo sapiens, GI187761307, Length=206, Percent_Identity=49.0291262135922, Blast_Score=208, Evalue=3e-54,
Organism=Homo sapiens, GI8051608, Length=206, Percent_Identity=49.0291262135922, Blast_Score=208, Evalue=3e-54,
Organism=Homo sapiens, GI4504437, Length=210, Percent_Identity=46.6666666666667, Blast_Score=200, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002051
- InterPro:   IPR016053
- InterPro:   IPR016084
- InterPro:   IPR018207 [H]

Pfam domain/function: PF01126 Heme_oxygenase [H]

EC number: =1.14.99.3 [H]

Molecular weight: Translated: 27035; Mature: 26904

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVALAAQLREGTKKSHTMAENTGFVSCFLKGVVDKLSYRKLVADLYFVYEAMEEEMHRL
CCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDHPVLAPIAFEQLDRRQALEEDLTFYFGADWRNQVETSPAAKEYVARIREIAQSSPELL
HCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEE
VGHHYTRYLGDLSGGQILKTIAQKAMNNPTDDGLHFYVFPQIEDEKAFKTTYRSAMDELP
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
IDQPMADRIVEEANHAFHLNMKMFQELEGNLVAAIGKVLFGFLTRRQRTGSTEEPVAA
CCCHHHHHHHHHCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AVALAAQLREGTKKSHTMAENTGFVSCFLKGVVDKLSYRKLVADLYFVYEAMEEEMHRL
CHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDHPVLAPIAFEQLDRRQALEEDLTFYFGADWRNQVETSPAAKEYVARIREIAQSSPELL
HCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEE
VGHHYTRYLGDLSGGQILKTIAQKAMNNPTDDGLHFYVFPQIEDEKAFKTTYRSAMDELP
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
IDQPMADRIVEEANHAFHLNMKMFQELEGNLVAAIGKVLFGFLTRRQRTGSTEEPVAA
CCCHHHHHHHHHCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]