Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241253

Identifier: 148241253

GI number: 148241253

Start: 149727

End: 150134

Strand: Direct

Name: 148241253

Synonym: SynRCC307_0154

Alternate gene names: NA

Gene position: 149727-150134 (Clockwise)

Preceding gene: 148241250

Following gene: 148241254

Centisome position: 6.73

GC content: 62.5

Gene sequence:

>408_bases
ATGAATGCCGCTGAGCAGGCCCGCAGCGTTGAGTTGGCTCAGCTCATTGCTTCGGCGCTGAATCAGTTCCGGCAGCGCTT
CCCAGAGCTCAAGCCGAACCTGCGGCCTTGGCGCGATGACCCCCAGACCCGCGCCTTTGCTGAAGGCAGCTCATTGGATC
TGGCCTTTCATCTCCCCGGCTGGAGCCCGCGCTGGCAATGCCGCAGCCTGTTGGTGCAGCTTCGTTTGGCTGATGCCGAG
CAGCCACGCCTGATGGGGATGCTGATCAGTGGCATGACCTTTCAAGGCGAACAGTGGCGACTCGCCACCGTGGGGCCTTG
GAGCGTGAGCGGTGAACGCGTGCCAGATGAAGCGATTTGCACTCAGCTTCAGCAGGTGTGCCGCGAACTGGTTGGACCGC
TGCCGTAA

Upstream 100 bases:

>100_bases
GCCGCCGTTGCTGGGGGGTGTGAGCTTCTCGTAACTAACCATGGGATGCGCAAGCCGGAGGTTGTCGGCATCGTGAGCCT
AGAGATTGACCTGCGCTGTC

Downstream 100 bases:

>100_bases
CCCTTCGCAACCAGATTGCCCCTGATCCCAGTCATGGCGCTTACGTTGGAAAACTGTTAACCGCGCCTGGCCCCATGGCT
GTTGCCCTCGCTGCCCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNAAEQARSVELAQLIASALNQFRQRFPELKPNLRPWRDDPQTRAFAEGSSLDLAFHLPGWSPRWQCRSLLVQLRLADAE
QPRLMGMLISGMTFQGEQWRLATVGPWSVSGERVPDEAICTQLQQVCRELVGPLP

Sequences:

>Translated_135_residues
MNAAEQARSVELAQLIASALNQFRQRFPELKPNLRPWRDDPQTRAFAEGSSLDLAFHLPGWSPRWQCRSLLVQLRLADAE
QPRLMGMLISGMTFQGEQWRLATVGPWSVSGERVPDEAICTQLQQVCRELVGPLP
>Mature_135_residues
MNAAEQARSVELAQLIASALNQFRQRFPELKPNLRPWRDDPQTRAFAEGSSLDLAFHLPGWSPRWQCRSLLVQLRLADAE
QPRLMGMLISGMTFQGEQWRLATVGPWSVSGERVPDEAICTQLQQVCRELVGPLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15268; Mature: 15268

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAEQARSVELAQLIASALNQFRQRFPELKPNLRPWRDDPQTRAFAEGSSLDLAFHLPG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCC
WSPRWQCRSLLVQLRLADAEQPRLMGMLISGMTFQGEQWRLATVGPWSVSGERVPDEAIC
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHH
TQLQQVCRELVGPLP
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MNAAEQARSVELAQLIASALNQFRQRFPELKPNLRPWRDDPQTRAFAEGSSLDLAFHLPG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCC
WSPRWQCRSLLVQLRLADAEQPRLMGMLISGMTFQGEQWRLATVGPWSVSGERVPDEAIC
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHH
TQLQQVCRELVGPLP
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA