| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is yeaD [H]
Identifier: 148241243
GI number: 148241243
Start: 138078
End: 138932
Strand: Direct
Name: yeaD [H]
Synonym: SynRCC307_0144
Alternate gene names: 148241243
Gene position: 138078-138932 (Clockwise)
Preceding gene: 148241242
Following gene: 148241244
Centisome position: 6.21
GC content: 61.64
Gene sequence:
>855_bases ATGCCTCTGCAGGAACTGTCGGCTCCCTATGACCATTCCGTGTTCACCGCTGAAAACGGTGATCTGATTCGGGTGGTGCC CGAGCGAGGCGGGCTGCTCACCGGCTGGCAGGTGCAGGGCCGCGAAATCATCTACTTAGACCTAGAGCGCTTTCTCACCC CGGGCCAATCGGTTCGCGGTGGTGCGCCAATCCTCTTCCCCATCTGCGGCAATCTCCCCGGCGACAGCTTGCCGTTGCCA GATGGCCGCACGGCCACGCTGAAGCAACACGGCTTTGCTCGCAACTTGCCTTGGAGCCTGAGTGCCTTGAGTGATGGCCG GGGCGTGCGGCTGGAGCTCAGCGATAGCGAGCAAACCCGTTCTGAATTTCCCTTTGAGTTTTTGCTGCAGCTGGATTACC GCCTGGCTCCCGGAGTGCTTGAGGTGGCGATGACGCTGCACAACCGCAGCGATCAGCCGTTGCCGTTCAGCTTTGGACTG CATCCCTATTTCAGTGTCAGCGGCCTGACGAGTTTGAGCTTTGAGGGCATGCCGGAGCAGGGCTTTGATCACAAACCCAT GGCCGCAGCCAACACCGCCAGCGTGCTCACCCAGTTGGATCAGGGCATTGATTTGTTGGTGCGGCCCGCAGGCAACGTGG CCTTGGTGGATGCCGCGGCGGGCCAGAAGCTCACGATGGAGCTCAGCGATCCCTGGAATCTGGCGGTGTTCTGGACCGAT CCGCCGCGATCGATGGTGTGCATGGAGCCCTGGACGGGGCCGCGCCAGAGCTTGATCAGTGGCGACCGCAAGCTTGAGCT GGCCCCTGGGGAACAGCGCAGCCTCTGTACCCGCTACGTGGTTTCAACTGTCTAA
Upstream 100 bases:
>100_bases GACGGAGGTGGTGCTGGAGGCAGGTCACTGCCCCCACGATGAAGTCCCCTCAATCGTTAACGCTGAGTTGCTGCAATGGC TGGGCACCTTGCCTTGAGCC
Downstream 100 bases:
>100_bases AGCTGATACATTCGCGCTTCTGTGAATGGGTCTGGGGTGCAGCAACTTCTCCAAAACCCTGTCAGCGTCGCAAGTAAACA ATCCAGCTGGACGTACCGGC
Product: galactose mutarotase-like protein
Products: NA
Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MPLQELSAPYDHSVFTAENGDLIRVVPERGGLLTGWQVQGREIIYLDLERFLTPGQSVRGGAPILFPICGNLPGDSLPLP DGRTATLKQHGFARNLPWSLSALSDGRGVRLELSDSEQTRSEFPFEFLLQLDYRLAPGVLEVAMTLHNRSDQPLPFSFGL HPYFSVSGLTSLSFEGMPEQGFDHKPMAAANTASVLTQLDQGIDLLVRPAGNVALVDAAAGQKLTMELSDPWNLAVFWTD PPRSMVCMEPWTGPRQSLISGDRKLELAPGEQRSLCTRYVVSTV
Sequences:
>Translated_284_residues MPLQELSAPYDHSVFTAENGDLIRVVPERGGLLTGWQVQGREIIYLDLERFLTPGQSVRGGAPILFPICGNLPGDSLPLP DGRTATLKQHGFARNLPWSLSALSDGRGVRLELSDSEQTRSEFPFEFLLQLDYRLAPGVLEVAMTLHNRSDQPLPFSFGL HPYFSVSGLTSLSFEGMPEQGFDHKPMAAANTASVLTQLDQGIDLLVRPAGNVALVDAAAGQKLTMELSDPWNLAVFWTD PPRSMVCMEPWTGPRQSLISGDRKLELAPGEQRSLCTRYVVSTV >Mature_283_residues PLQELSAPYDHSVFTAENGDLIRVVPERGGLLTGWQVQGREIIYLDLERFLTPGQSVRGGAPILFPICGNLPGDSLPLPD GRTATLKQHGFARNLPWSLSALSDGRGVRLELSDSEQTRSEFPFEFLLQLDYRLAPGVLEVAMTLHNRSDQPLPFSFGLH PYFSVSGLTSLSFEGMPEQGFDHKPMAAANTASVLTQLDQGIDLLVRPAGNVALVDAAAGQKLTMELSDPWNLAVFWTDP PRSMVCMEPWTGPRQSLISGDRKLELAPGEQRSLCTRYVVSTV
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI87081973, Length=259, Percent_Identity=24.7104247104247, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.15 [H]
Molecular weight: Translated: 31146; Mature: 31015
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLQELSAPYDHSVFTAENGDLIRVVPERGGLLTGWQVQGREIIYLDLERFLTPGQSVRG CCHHHHCCCCCCCEEEECCCCEEEEEECCCCEEECEEECCCEEEEEEHHHHCCCCCCCCC GAPILFPICGNLPGDSLPLPDGRTATLKQHGFARNLPWSLSALSDGRGVRLELSDSEQTR CCCEEEEECCCCCCCCCCCCCCCEEEHHHCCCCCCCCCEEEECCCCCCEEEEECCCHHHH SEFPFEFLLQLDYRLAPGVLEVAMTLHNRSDQPLPFSFGLHPYFSVSGLTSLSFEGMPEQ HHCCHHHEEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCEEEECCCCCCC GFDHKPMAAANTASVLTQLDQGIDLLVRPAGNVALVDAAAGQKLTMELSDPWNLAVFWTD CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCEEEEEECCCEEEEEEEEC PPRSMVCMEPWTGPRQSLISGDRKLELAPGEQRSLCTRYVVSTV CCCCEEEECCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure PLQELSAPYDHSVFTAENGDLIRVVPERGGLLTGWQVQGREIIYLDLERFLTPGQSVRG CHHHHCCCCCCCEEEECCCCEEEEEECCCCEEECEEECCCEEEEEEHHHHCCCCCCCCC GAPILFPICGNLPGDSLPLPDGRTATLKQHGFARNLPWSLSALSDGRGVRLELSDSEQTR CCCEEEEECCCCCCCCCCCCCCCEEEHHHCCCCCCCCCEEEECCCCCCEEEEECCCHHHH SEFPFEFLLQLDYRLAPGVLEVAMTLHNRSDQPLPFSFGLHPYFSVSGLTSLSFEGMPEQ HHCCHHHEEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCEEEECCCCCCC GFDHKPMAAANTASVLTQLDQGIDLLVRPAGNVALVDAAAGQKLTMELSDPWNLAVFWTD CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCEEEEEECCCEEEEEEEEC PPRSMVCMEPWTGPRQSLISGDRKLELAPGEQRSLCTRYVVSTV CCCCEEEECCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 9298646; 10493123 [H]