Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is yugF [H]

Identifier: 148241242

GI number: 148241242

Start: 137199

End: 138074

Strand: Direct

Name: yugF [H]

Synonym: SynRCC307_0143

Alternate gene names: 148241242

Gene position: 137199-138074 (Clockwise)

Preceding gene: 148241240

Following gene: 148241243

Centisome position: 6.17

GC content: 62.21

Gene sequence:

>876_bases
TTGGCTTGCGCCGCTGTGTCAGCGTCTTGGACTTTTCGCGGCAGCCCGATTCATTGTGTTGCTGCTGGTGATGATCAGCA
GCGCCCTGCTGTGCTGCTGGTGCATGGCTTTGGTGCTTCTACCGACCACTGGCGTCACAACCTTCCGGTGCTCTCCGAGA
GCTATGAGGTGCACGCCCTCGACCTGCTCGGCTTTGGCCGCAGCGCCAAGCCAGCTGGGGTGGCTTACGGGGGAGCGCTG
TGGCGCGATCTGCTCTGCGCCTATACCCGCGAGCGCATTGGCCGGCCCACGGTGTTGGTGGGGAACTCCTTGGGCGGCTA
TTCAGCCTTGGCTGCCGGTGCAGCTCTTGGCGATGACTGCGCTGGGGTGGTGCTGCTGAATGCAGCCGGGCCATTCAGTG
AGGAAAAAGCTCCCCTGAAGGGTTGGGGCGCCATTGCCCGCAAAAGCATTGGCACGGCCATCTTGAAAAGCCCTGTGGTG
CAGAGGTTGCTGTTTGAAAACCTGCGCCGTCCCGCCACCATTCGCCGCACCTTGCGGCAGGTGTACATCGATCAGACCAA
CGTCGATGACGAGCTGGTGGAGGCGATCCGCCAGCCCTCCCTCGATCCAGGGGCGTTTGGCGTGTTTCGCACGGTGTTCG
ACATCCCCAGCGGCCAACCCCTTGATGAGTTGTTTGCCCAGTTGAAGGCTCCACTGCTGTTGCTTTGGGGAATCCGCGAT
CCCTGGATCAATGCCGCCGGGCGCCGAGAAGCATTCCAGCGCTATGCCCCTGAGGCCACGACGGAGGTGGTGCTGGAGGC
AGGTCACTGCCCCCACGATGAAGTCCCCTCAATCGTTAACGCTGAGTTGCTGCAATGGCTGGGCACCTTGCCTTGA

Upstream 100 bases:

>100_bases
AGGCCCATAGCGCTGAACCGCTGGCCAAGGTGATCCAGTCGCTACTGCTCAGGGGCAAGGCTCGGCGGCAAACGCCGCGT
ATCCCTAGCATCTCTGGCCC

Downstream 100 bases:

>100_bases
GCCATGCCTCTGCAGGAACTGTCGGCTCCCTATGACCATTCCGTGTTCACCGCTGAAAACGGTGATCTGATTCGGGTGGT
GCCCGAGCGAGGCGGGCTGC

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MACAAVSASWTFRGSPIHCVAAGDDQQRPAVLLVHGFGASTDHWRHNLPVLSESYEVHALDLLGFGRSAKPAGVAYGGAL
WRDLLCAYTRERIGRPTVLVGNSLGGYSALAAGAALGDDCAGVVLLNAAGPFSEEKAPLKGWGAIARKSIGTAILKSPVV
QRLLFENLRRPATIRRTLRQVYIDQTNVDDELVEAIRQPSLDPGAFGVFRTVFDIPSGQPLDELFAQLKAPLLLLWGIRD
PWINAAGRREAFQRYAPEATTEVVLEAGHCPHDEVPSIVNAELLQWLGTLP

Sequences:

>Translated_291_residues
MACAAVSASWTFRGSPIHCVAAGDDQQRPAVLLVHGFGASTDHWRHNLPVLSESYEVHALDLLGFGRSAKPAGVAYGGAL
WRDLLCAYTRERIGRPTVLVGNSLGGYSALAAGAALGDDCAGVVLLNAAGPFSEEKAPLKGWGAIARKSIGTAILKSPVV
QRLLFENLRRPATIRRTLRQVYIDQTNVDDELVEAIRQPSLDPGAFGVFRTVFDIPSGQPLDELFAQLKAPLLLLWGIRD
PWINAAGRREAFQRYAPEATTEVVLEAGHCPHDEVPSIVNAELLQWLGTLP
>Mature_290_residues
ACAAVSASWTFRGSPIHCVAAGDDQQRPAVLLVHGFGASTDHWRHNLPVLSESYEVHALDLLGFGRSAKPAGVAYGGALW
RDLLCAYTRERIGRPTVLVGNSLGGYSALAAGAALGDDCAGVVLLNAAGPFSEEKAPLKGWGAIARKSIGTAILKSPVVQ
RLLFENLRRPATIRRTLRQVYIDQTNVDDELVEAIRQPSLDPGAFGVFRTVFDIPSGQPLDELFAQLKAPLLLLWGIRDP
WINAAGRREAFQRYAPEATTEVVLEAGHCPHDEVPSIVNAELLQWLGTLP

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 31390; Mature: 31259

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACAAVSASWTFRGSPIHCVAAGDDQQRPAVLLVHGFGASTDHWRHNLPVLSESYEVHAL
CCCCEECCCEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCHHCCCCCCCCCCCEEEE
DLLGFGRSAKPAGVAYGGALWRDLLCAYTRERIGRPTVLVGNSLGGYSALAAGAALGDDC
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCC
AGVVLLNAAGPFSEEKAPLKGWGAIARKSIGTAILKSPVVQRLLFENLRRPATIRRTLRQ
CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VYIDQTNVDDELVEAIRQPSLDPGAFGVFRTVFDIPSGQPLDELFAQLKAPLLLLWGIRD
HHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCC
PWINAAGRREAFQRYAPEATTEVVLEAGHCPHDEVPSIVNAELLQWLGTLP
CCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ACAAVSASWTFRGSPIHCVAAGDDQQRPAVLLVHGFGASTDHWRHNLPVLSESYEVHAL
CCCEECCCEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCHHCCCCCCCCCCCEEEE
DLLGFGRSAKPAGVAYGGALWRDLLCAYTRERIGRPTVLVGNSLGGYSALAAGAALGDDC
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCC
AGVVLLNAAGPFSEEKAPLKGWGAIARKSIGTAILKSPVVQRLLFENLRRPATIRRTLRQ
CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VYIDQTNVDDELVEAIRQPSLDPGAFGVFRTVFDIPSGQPLDELFAQLKAPLLLLWGIRD
HHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCC
PWINAAGRREAFQRYAPEATTEVVLEAGHCPHDEVPSIVNAELLQWLGTLP
CCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]