Click here to switch to the map view.

The map label for this gene is rnfG

Identifier: 147675771

GI number: 147675771

Start: 572456

End: 573085

Strand: Reverse

Name: rnfG

Synonym: VC0395_A0534

Alternate gene names: 147675771

Gene position: 573085-572456 (Counterclockwise)

Preceding gene: 147674988

Following gene: 147673085

Centisome position: 18.95

GC content: 49.37

Gene sequence:

>630_bases
ATGCTGACAGCAATTCGAAAAAATGGCCTGATCCTCGCCGTCTTTGCCTGTGTTTCAACGGGTTTGGTGGCGCTGACATA
CGCCCTCACCGCAGAGCAAATTCAACAACAAGAGCAAAAGCAGCTACTGCAGGTTCTCAACCAAGTGATCCCACATAAGT
ATCACGATAACCCTCTGGCGCAAGCCTGTACTTTAGTCAATGATGACAAACTCGGTACAGCCAAACCCATGCATGCTTAT
CTGGCGCAACGTGACGGCCAGCCCACAGCCATTGCGATTGAGACCATTGCCCCCGATGGTTATAACGGTGAAATAAAATT
GATCGTCGGGATCGCCAATAACGGCACCGTACTTGGTGTGCGTGTACTTGCCCACCAAGAAACACCGGGGCTAGGTGATA
AGATTGATTTACGGATCAGTAATTGGGTATTAGGCTTTAACGGCCAACAAGTCACCGCCGATAATCAGGATGACTGGAAA
GTACGTAAAGATGGCGGTCAGTTTGACCAATTTACGGGTGCAACCATTACTCCTCGCGCTGTCGTACTGGCGGTCAAAAA
AGCCGTGGAGTATGTCAACCAACATCAACAACAGCTGCACAATCAGCCGAATCCGTGTGAGGGTCAATAA

Upstream 100 bases:

>100_bases
CTGATGGTGTCGCCTTTGCCGTACTGCTCGCCAACATGTGCGTACCGCTGATTGACTACTACACCAAACCGAGAACTTAC
GGACACTAAGAGCGCGACTT

Downstream 100 bases:

>100_bases
CATGAGTGAAAACCGAACTCTGATGTTAAATGGCATGTGGAACAACAACCCAGCCTTAGTGCAATTACTGGGATTGTGTC
CGCTGCTCGCCGTTTCCTCC

Product: electron transport complex protein RnfG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MLTAIRKNGLILAVFACVSTGLVALTYALTAEQIQQQEQKQLLQVLNQVIPHKYHDNPLAQACTLVNDDKLGTAKPMHAY
LAQRDGQPTAIAIETIAPDGYNGEIKLIVGIANNGTVLGVRVLAHQETPGLGDKIDLRISNWVLGFNGQQVTADNQDDWK
VRKDGGQFDQFTGATITPRAVVLAVKKAVEYVNQHQQQLHNQPNPCEGQ

Sequences:

>Translated_209_residues
MLTAIRKNGLILAVFACVSTGLVALTYALTAEQIQQQEQKQLLQVLNQVIPHKYHDNPLAQACTLVNDDKLGTAKPMHAY
LAQRDGQPTAIAIETIAPDGYNGEIKLIVGIANNGTVLGVRVLAHQETPGLGDKIDLRISNWVLGFNGQQVTADNQDDWK
VRKDGGQFDQFTGATITPRAVVLAVKKAVEYVNQHQQQLHNQPNPCEGQ
>Mature_209_residues
MLTAIRKNGLILAVFACVSTGLVALTYALTAEQIQQQEQKQLLQVLNQVIPHKYHDNPLAQACTLVNDDKLGTAKPMHAY
LAQRDGQPTAIAIETIAPDGYNGEIKLIVGIANNGTVLGVRVLAHQETPGLGDKIDLRISNWVLGFNGQQVTADNQDDWK
VRKDGGQFDQFTGATITPRAVVLAVKKAVEYVNQHQQQLHNQPNPCEGQ

Specific function: May be part of a membrane complex involved in electron transport

COG id: COG4659

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfG

Gene ontology:

Cell location: Cell inner membrane (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnfG family

Homologues:

Organism=Escherichia coli, GI1787918, Length=203, Percent_Identity=49.2610837438424, Blast_Score=196, Evalue=9e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFG_VIBC3 (A5F2S8)

Other databases:

- EMBL:   CP000627
- EMBL:   CP001235
- STRING:   A5F2S8
- GenomeReviews:   CP000627_GR
- GenomeReviews:   CP001235_GR
- KEGG:   vco:VC0395_A0534
- eggNOG:   COG4659
- HOGENOM:   HBG454413
- OMA:   DAVTEVN
- ProtClustDB:   PRK01908
- BioCyc:   VCHO345073:VC0395_A0534-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00479
- InterPro:   IPR022989
- InterPro:   IPR010209
- InterPro:   IPR007329
- SMART:   SM00900
- TIGRFAMs:   TIGR01947

Pfam domain/function: PF04205 FMN_bind

EC number: NA

Molecular weight: Translated: 22810; Mature: 22810

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17bdf7dc)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTAIRKNGLILAVFACVSTGLVALTYALTAEQIQQQEQKQLLQVLNQVIPHKYHDNPLA
CCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
QACTLVNDDKLGTAKPMHAYLAQRDGQPTAIAIETIAPDGYNGEIKLIVGIANNGTVLGV
HHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEEEE
RVLAHQETPGLGDKIDLRISNWVLGFNGQQVTADNQDDWKVRKDGGQFDQFTGATITPRA
EEEEECCCCCCCCEEEEEEEEEEEECCCCEEECCCCCCCEEECCCCCCCCCCCCCCCHHH
VVLAVKKAVEYVNQHQQQLHNQPNPCEGQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCH
>Mature Secondary Structure
MLTAIRKNGLILAVFACVSTGLVALTYALTAEQIQQQEQKQLLQVLNQVIPHKYHDNPLA
CCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
QACTLVNDDKLGTAKPMHAYLAQRDGQPTAIAIETIAPDGYNGEIKLIVGIANNGTVLGV
HHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEEEE
RVLAHQETPGLGDKIDLRISNWVLGFNGQQVTADNQDDWKVRKDGGQFDQFTGATITPRA
EEEEECCCCCCCCEEEEEEEEEEEECCCCEEECCCCCCCEEECCCCCCCCCCCCCCCHHH
VVLAVKKAVEYVNQHQQQLHNQPNPCEGQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA