| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is mdoH
Identifier: 147675546
GI number: 147675546
Start: 920845
End: 923010
Strand: Reverse
Name: mdoH
Synonym: VC0395_A0906
Alternate gene names: 147675546
Gene position: 923010-920845 (Counterclockwise)
Preceding gene: 147675383
Following gene: 147675102
Centisome position: 30.52
GC content: 51.06
Gene sequence:
>2166_bases ATGACAAACCCAATGGTTGAACAAGGAGCCTCCCAGTTAATGGGAGGCTCTGCCATGCCACCAGAACAACACGGCGAAAT GCCGGAACAAAATCTTAAACGACTGAGTGAAGGTTTTCCGCGTGACGCCATTCAAACGGGTGGGGTTAAATCCTGCTCGT GGCGACGTGTGTTTGTGGTTGGTTTTGCTTTACTCATTTCTGCTTTTGCCATCTTTGAAATGCGCGGCGTATTTTTGGTC GGTGGACTAACGCCTATCGAATACGCGGTACTGGTTCTCTTTGCTATCAACTTCTGCTGGATTGCCTTAGCCTTCTCAAG CTCGATTGCCGGATTTTTTGTTCTCGCGAGTCGCAAACCTGCCCCCAATACAGAACAACCCCTAACGACACGTACCGCAA TTTTGATGCCGACTTACAACGAGGCACCCGATCGAGTCTTTGCCGCAGTAGAAACCATGGCTTTGGCTCTGGCGAAAACT GAACACGGACATGCCTTCGATTGGTTTATTCTCAGTGACACCACCGATCCTGAAGTGGCGTTATCTGAAGAGCAAGCCTT CTGGTTGCTGCGTCAACAAACCGCAGGTAAAGCTAACGTTTATTACCGCCGCCGTCGTAAAAACATTGCGCGCAAAGCGG GGAATATTGCCGATTTCTGCCGTCGTTGGGGCTCGGGGTACGACCACTTATTAGTATTGGATGCCGATAGTGTGATGCAG CCAAGTACTATGATTTCATTGGCTCAACGGATGCAAAGTGACCCAGATGCTGGATTGATTCAAACCATTCCGGCGCTGAT CAATGGCACGACGCTCATGGCTCGTGTGCAGCAGTTTGCCGCTCGCATCTATGGTCCAGTGGTCGGTACTGGTCTGGCTT GGTGGGTACAAAAGGAAGGTAACTTCTGGGGTCACAACGCGATTATTCGTACGGAAGCCTTTATGAGTGCCGCTGGCCTA CCGCATTTATCTGGTAGACCGCCTTTTGGTGGACATATCCTCAGTCACGATTTCGTGGAAGCTGCTTTAATTCGTCGCGC AGGTTGGAGTGTTACCATCGCCGCGGATCTGAGTGGCTCTTTTGAAGAGTGCCCTCCTTCGATTATCGATTTAGCCGTGC GCGATCGCCGTTGGTGTCAAGGCAACCTGCAACACAGCCGCATCATAGGCACCAAAGGTCTGCACTGGATCAGTCGTTTG CACCTGACTACGGGCATTATGTCCTACCTCTCTTCGCCATTTTGGCTGCTGTTGATTTTGTCGGGTTTGTTACTGGCACT GCAAGCGCACTTTATTCGTCCTGAGTATTTTACCGAGCAGTTTTCACTGTTCCCGACTTGGCCGGTCATGGACTCCGCAC GCGCATTGCAACTATTTTACATCACCATGGGTATTCTATTTAGCCCGAAAATTTTCGGATTACTGCTGCTGATGTTTGAT GGTGAAATGTGTCGTACCTTAGGGGGACGACTGAGAGTCATACTCAGCGCGGTGACAGAGATCCTACTGTCTGCACTGGT CGCTCCCATCATGATGCTCATCCACTGTGGCGCGGTTGTGTCGATTTTGTTTGGACGTGATAGTGGTTGGGCTCCTCAAC GACGTGATGACGGTAGCTTGCCAATCAAAGACTTGCTGTACCGCCACCGTTGGCATATGACAGCGGGAGTACTCCTTGGT TATGCAGCGATGCTCGACTCATGGACCCTACTGGCGTGGATGTCTCCAGCCTTAATCGGTTTGTGGTTCTCTGTACCACT CTCTGGGATCACGGCGTCATACACCATCGGAGCTTGGTTTAAACAAAAACGCATTCTTGCGACTCCAGAAGAAATTGAAA CACCGGCTATTGTGCTTGCTGCGCAAGCTCGTCGTGACGAGTATGTGGTGGATCTTCAGGAAGTGTGGAACGCACGCATG GTACTTGCTGATCACAACCTGATCGCTCTACATATTGCGATGATGGATAAACTGCCGTCGCGCCAACCCGGCACCGCGAT TGAGCCTTTGGATGCGGTAGCACGCATTAAAGTACAGGAAGCGGAGAGTCAGGAAAGCCTATTGGCGCTACTGACCAAAG TCGAACTGAGTTATGTTCTTGGCAATCCCCTGCTGATCCAGCAGGTAGCCAAACTGCCGCCCAGCTTAGCGAACCAGACT GTCTAA
Upstream 100 bases:
>100_bases GACGCTGGCTGAACTACGGGCAGAGCTCACTTTGCAAGAAGCGCGTCCTGTAGAAACTTGGTTGTATCGTTGGACCCTGT AGTAAGTACTCGGATTTTTT
Downstream 100 bases:
>100_bases ACTGAAAGTGTCGCCTACACGATTGTGTTCGCGACACTTTTTTATCCGCTCTTACTTTTTATCCCCGCTGACTTTTTACT CCCCTATTACTTAACGCTTA
Product: glucosyltransferase MdoH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 721; Mature: 720
Protein sequence:
>721_residues MTNPMVEQGASQLMGGSAMPPEQHGEMPEQNLKRLSEGFPRDAIQTGGVKSCSWRRVFVVGFALLISAFAIFEMRGVFLV GGLTPIEYAVLVLFAINFCWIALAFSSSIAGFFVLASRKPAPNTEQPLTTRTAILMPTYNEAPDRVFAAVETMALALAKT EHGHAFDWFILSDTTDPEVALSEEQAFWLLRQQTAGKANVYYRRRRKNIARKAGNIADFCRRWGSGYDHLLVLDADSVMQ PSTMISLAQRMQSDPDAGLIQTIPALINGTTLMARVQQFAARIYGPVVGTGLAWWVQKEGNFWGHNAIIRTEAFMSAAGL PHLSGRPPFGGHILSHDFVEAALIRRAGWSVTIAADLSGSFEECPPSIIDLAVRDRRWCQGNLQHSRIIGTKGLHWISRL HLTTGIMSYLSSPFWLLLILSGLLLALQAHFIRPEYFTEQFSLFPTWPVMDSARALQLFYITMGILFSPKIFGLLLLMFD GEMCRTLGGRLRVILSAVTEILLSALVAPIMMLIHCGAVVSILFGRDSGWAPQRRDDGSLPIKDLLYRHRWHMTAGVLLG YAAMLDSWTLLAWMSPALIGLWFSVPLSGITASYTIGAWFKQKRILATPEEIETPAIVLAAQARRDEYVVDLQEVWNARM VLADHNLIALHIAMMDKLPSRQPGTAIEPLDAVARIKVQEAESQESLLALLTKVELSYVLGNPLLIQQVAKLPPSLANQT V
Sequences:
>Translated_721_residues MTNPMVEQGASQLMGGSAMPPEQHGEMPEQNLKRLSEGFPRDAIQTGGVKSCSWRRVFVVGFALLISAFAIFEMRGVFLV GGLTPIEYAVLVLFAINFCWIALAFSSSIAGFFVLASRKPAPNTEQPLTTRTAILMPTYNEAPDRVFAAVETMALALAKT EHGHAFDWFILSDTTDPEVALSEEQAFWLLRQQTAGKANVYYRRRRKNIARKAGNIADFCRRWGSGYDHLLVLDADSVMQ PSTMISLAQRMQSDPDAGLIQTIPALINGTTLMARVQQFAARIYGPVVGTGLAWWVQKEGNFWGHNAIIRTEAFMSAAGL PHLSGRPPFGGHILSHDFVEAALIRRAGWSVTIAADLSGSFEECPPSIIDLAVRDRRWCQGNLQHSRIIGTKGLHWISRL HLTTGIMSYLSSPFWLLLILSGLLLALQAHFIRPEYFTEQFSLFPTWPVMDSARALQLFYITMGILFSPKIFGLLLLMFD GEMCRTLGGRLRVILSAVTEILLSALVAPIMMLIHCGAVVSILFGRDSGWAPQRRDDGSLPIKDLLYRHRWHMTAGVLLG YAAMLDSWTLLAWMSPALIGLWFSVPLSGITASYTIGAWFKQKRILATPEEIETPAIVLAAQARRDEYVVDLQEVWNARM VLADHNLIALHIAMMDKLPSRQPGTAIEPLDAVARIKVQEAESQESLLALLTKVELSYVLGNPLLIQQVAKLPPSLANQT V >Mature_720_residues TNPMVEQGASQLMGGSAMPPEQHGEMPEQNLKRLSEGFPRDAIQTGGVKSCSWRRVFVVGFALLISAFAIFEMRGVFLVG GLTPIEYAVLVLFAINFCWIALAFSSSIAGFFVLASRKPAPNTEQPLTTRTAILMPTYNEAPDRVFAAVETMALALAKTE HGHAFDWFILSDTTDPEVALSEEQAFWLLRQQTAGKANVYYRRRRKNIARKAGNIADFCRRWGSGYDHLLVLDADSVMQP STMISLAQRMQSDPDAGLIQTIPALINGTTLMARVQQFAARIYGPVVGTGLAWWVQKEGNFWGHNAIIRTEAFMSAAGLP HLSGRPPFGGHILSHDFVEAALIRRAGWSVTIAADLSGSFEECPPSIIDLAVRDRRWCQGNLQHSRIIGTKGLHWISRLH LTTGIMSYLSSPFWLLLILSGLLLALQAHFIRPEYFTEQFSLFPTWPVMDSARALQLFYITMGILFSPKIFGLLLLMFDG EMCRTLGGRLRVILSAVTEILLSALVAPIMMLIHCGAVVSILFGRDSGWAPQRRDDGSLPIKDLLYRHRWHMTAGVLLGY AAMLDSWTLLAWMSPALIGLWFSVPLSGITASYTIGAWFKQKRILATPEEIETPAIVLAAQARRDEYVVDLQEVWNARMV LADHNLIALHIAMMDKLPSRQPGTAIEPLDAVARIKVQEAESQESLLALLTKVELSYVLGNPLLIQQVAKLPPSLANQTV
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
COG id: COG2943
COG function: function code M; Membrane glycosyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily
Homologues:
Organism=Escherichia coli, GI1787287, Length=542, Percent_Identity=39.6678966789668, Blast_Score=391, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): OPGH_VIBC3 (A5F1Q0)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - ProteinModelPortal: A5F1Q0 - STRING: A5F1Q0 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A0906 - eggNOG: COG2943 - HOGENOM: HBG668600 - OMA: MSGECLT - ProtClustDB: PRK05454 - BioCyc: VCHO345073:VC0395_A0906-MONOMER - HAMAP: MF_01072 - InterPro: IPR001173
Pfam domain/function: PF00535 Glycos_transf_2
EC number: 2.4.1.- [C]
Molecular weight: Translated: 79881; Mature: 79750
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x18cba490)-; HASH(0x187a926c)-; HASH(0x19518010)-; HASH(0x1952a3cc)-; HASH(0x185ece38)-; HASH(0x190534c0)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPMVEQGASQLMGGSAMPPEQHGEMPEQNLKRLSEGFPRDAIQTGGVKSCSWRRVFVV CCCCHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHH GFALLISAFAIFEMRGVFLVGGLTPIEYAVLVLFAINFCWIALAFSSSIAGFFVLASRKP HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC APNTEQPLTTRTAILMPTYNEAPDRVFAAVETMALALAKTEHGHAFDWFILSDTTDPEVA CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEE LSEEQAFWLLRQQTAGKANVYYRRRRKNIARKAGNIADFCRRWGSGYDHLLVLDADSVMQ ECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCHHCC PSTMISLAQRMQSDPDAGLIQTIPALINGTTLMARVQQFAARIYGPVVGTGLAWWVQKEG HHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC NFWGHNAIIRTEAFMSAAGLPHLSGRPPFGGHILSHDFVEAALIRRAGWSVTIAADLSGS CCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCC FEECPPSIIDLAVRDRRWCQGNLQHSRIIGTKGLHWISRLHLTTGIMSYLSSPFWLLLIL HHHCCHHHHHHHHHCCHHHCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH SGLLLALQAHFIRPEYFTEQFSLFPTWPVMDSARALQLFYITMGILFSPKIFGLLLLMFD HHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHC GEMCRTLGGRLRVILSAVTEILLSALVAPIMMLIHCGAVVSILFGRDSGWAPQRRDDGSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PIKDLLYRHRWHMTAGVLLGYAAMLDSWTLLAWMSPALIGLWFSVPLSGITASYTIGAWF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHH KQKRILATPEEIETPAIVLAAQARRDEYVVDLQEVWNARMVLADHNLIALHIAMMDKLPS HCCCCCCCCHHHCCCEEEEEEHHCCCCCEEEHHHHCCCEEEEECCCEEEHHHHHHHHCCC RQPGTAIEPLDAVARIKVQEAESQESLLALLTKVELSYVLGNPLLIQQVAKLPPSLANQT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCC V H >Mature Secondary Structure TNPMVEQGASQLMGGSAMPPEQHGEMPEQNLKRLSEGFPRDAIQTGGVKSCSWRRVFVV CCCHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHH GFALLISAFAIFEMRGVFLVGGLTPIEYAVLVLFAINFCWIALAFSSSIAGFFVLASRKP HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC APNTEQPLTTRTAILMPTYNEAPDRVFAAVETMALALAKTEHGHAFDWFILSDTTDPEVA CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEE LSEEQAFWLLRQQTAGKANVYYRRRRKNIARKAGNIADFCRRWGSGYDHLLVLDADSVMQ ECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCHHCC PSTMISLAQRMQSDPDAGLIQTIPALINGTTLMARVQQFAARIYGPVVGTGLAWWVQKEG HHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC NFWGHNAIIRTEAFMSAAGLPHLSGRPPFGGHILSHDFVEAALIRRAGWSVTIAADLSGS CCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCC FEECPPSIIDLAVRDRRWCQGNLQHSRIIGTKGLHWISRLHLTTGIMSYLSSPFWLLLIL HHHCCHHHHHHHHHCCHHHCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH SGLLLALQAHFIRPEYFTEQFSLFPTWPVMDSARALQLFYITMGILFSPKIFGLLLLMFD HHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHC GEMCRTLGGRLRVILSAVTEILLSALVAPIMMLIHCGAVVSILFGRDSGWAPQRRDDGSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PIKDLLYRHRWHMTAGVLLGYAAMLDSWTLLAWMSPALIGLWFSVPLSGITASYTIGAWF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHH KQKRILATPEEIETPAIVLAAQARRDEYVVDLQEVWNARMVLADHNLIALHIAMMDKLPS HCCCCCCCCHHHCCCEEEEEEHHCCCCCEEEHHHHCCCEEEEECCCEEEHHHHHHHHCCC RQPGTAIEPLDAVARIKVQEAESQESLLALLTKVELSYVLGNPLLIQQVAKLPPSLANQT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCC V H
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA