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The map label for this gene is flaC

Identifier: 147675419

GI number: 147675419

Start: 1886309

End: 1887442

Strand: Reverse

Name: flaC

Synonym: VC0395_A1779

Alternate gene names: 147675419

Gene position: 1887442-1886309 (Counterclockwise)

Preceding gene: 147674518

Following gene: 147673266

Centisome position: 62.41

GC content: 48.41

Gene sequence:

>1134_bases
ATGGCGGTGAATGTAAACACCAACGTGTCAGCAATGACAGCACAACGGTACTTGACGAGTGCAACCAATGCACAACAATC
GTCAATGGAACGTCTATCTTCAGGATACAAAATTAACAGCGCAAAAGACGATGCGGCCGGTCTGCAGATCTCTAACCGCT
TGAACGTGCAAAGCCGAGGTTTAGGTGTCGCCGTTCGTAACGCCAACGATGGTATTTCGATGGCGCAAACCGCGGAAGGG
GCAATGAAAGAGACCACCAACATCTTACAACGTATGCGTGATCTCTCCTTGCAATCAGCAAACGGTTCGAACTCAAAAGC
TGACCGTGTTGCGATTCAAGAAGAAATTACCGCGTTGAATGATGAGCTTAATCGTGTGGCCGAAACCACCTCTTTCGGAG
GTAACAAGCTGCTCAACGGTACATTCGCAACCAAATCATTCCAGATTGGTGCGGATAACGGTGAAGCGGTAATGCTTAAC
ATCAAAGATATGCGCAGCGATAACGCTTTGATGGGAGGTAAAACCTATCAAGCGGCTAACGGTAAAGACAAAAACTGGGG
CGTGGAAGCGGGTAAAACCGATCTGACCATCACTCTGAAAGACAAACGCGAAGGCGATGTCACCATTTCGATCAATGCGA
AAGAAGGGGATGATATCGAAGAGCTGGCCACTTACATCAACGGTCAAACCGACATGATCAAAGCATCGGTGGATGAAGAA
GGTAAGTTACAGCTATTCACTGATAACAACCGAATCGATGGTGCTGCGACCTTTGGTGGCGCACTTGCCGGTGAGTTAGG
TATCGGTGCTGCGCAAGACGTGACGGTTGATACTCTGGATGTCACTACGGTTGGTGGTGCACAAGAGAGTGTGGCGATTG
TCGATGCTGCCTTGAAATATGTGGATAGCCATCGTGCTGAACTCGGTGCATTCCAAAACCGATTCAACCACGCTATCAAC
AACTTAGATAACATTAACGAAAACGTGAATGCGTCTAAGAGCCGGATCAAAGATACAGACTTTGCCAAAGAAACGACTGC
ACTGACCAAGGCGCAGATCCTTTCTCAAGCATCAAGTTCTGTTCTCGCACAAGCCAAGCAGGCACCCAACTCAGCACTGG
CTCTTCTAGGCTAG

Upstream 100 bases:

>100_bases
CGCTAATAGAGGTAACTTTGAGAGAACTGCTTGGTTTTCCGAGACGTCGGAGACCGTTTGGGAGTTCCGCTACGTCGGAA
AATCAATAGGAGATACCACT

Downstream 100 bases:

>100_bases
TTCGAGTTGATAGGAAAAAACCCAGCTGCAGCTGGGTTTTTTATTGTCATCCCTAAACCACCGCTTTTAGCGGTGGTGAT
TGTCCCTAGGGGCTTTTGCC

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGVAVRNANDGISMAQTAEG
AMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLN
IKDMRSDNALMGGKTYQAANGKDKNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEE
GKLQLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNRFNHAIN
NLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALALLG

Sequences:

>Translated_377_residues
MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGVAVRNANDGISMAQTAEG
AMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLN
IKDMRSDNALMGGKTYQAANGKDKNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEE
GKLQLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNRFNHAIN
NLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALALLG
>Mature_376_residues
AVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGVAVRNANDGISMAQTAEGA
MKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNI
KDMRSDNALMGGKTYQAANGKDKNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEEG
KLQLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNRFNHAINN
LDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALALLG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. FlaC is not essential for flagellar synthesis and motility

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family

Homologues:

Organism=Escherichia coli, GI1788232, Length=166, Percent_Identity=45.1807228915663, Blast_Score=132, Evalue=4e-32,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): FLAC_VIBC3 (A5F671)

Other databases:

- EMBL:   AF007121
- EMBL:   CP000627
- EMBL:   CP001235
- ProteinModelPortal:   A5F671
- STRING:   A5F671
- GenomeReviews:   CP000627_GR
- GenomeReviews:   CP001235_GR
- KEGG:   vco:VC0395_A1779
- eggNOG:   COG1344
- HOGENOM:   HBG758847
- OMA:   VISRIND
- ProtClustDB:   PRK08869
- BioCyc:   VCHO345073:VC0395_A1779-MONOMER
- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810
- PRINTS:   PR00207

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N

EC number: NA

Molecular weight: Translated: 39906; Mature: 39774

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG
CEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCCCCCCCCEEECCCCCEECCC
LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAAN
HHHHHHHHHHCCCCCEEECCEEECCEEEEECCCCCEEEEEECCCCCCCCEECCCEEECCC
GKDKNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEE
CCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCC
GKLQLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKY
CCEEEEECCCCCCCHHHHCCHHHHHCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHH
VDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VLAQAKQAPNSALALLG
HHHHHHHCCCCEEEECC
>Mature Secondary Structure 
AVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG
EEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCCCCCCCCEEECCCCCEECCC
LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAAN
HHHHHHHHHHCCCCCEEECCEEECCEEEEECCCCCEEEEEECCCCCCCCEECCCEEECCC
GKDKNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEE
CCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCC
GKLQLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKY
CCEEEEECCCCCCCHHHHCCHHHHHCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHH
VDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VLAQAKQAPNSALALLG
HHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9440520