| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673266
Identifier: 147673266
GI number: 147673266
Start: 1886189
End: 1886302
Strand: Reverse
Name: 147673266
Synonym: VC0395_A1778
Alternate gene names: NA
Gene position: 1886302-1886189 (Counterclockwise)
Preceding gene: 147675419
Following gene: 147673504
Centisome position: 62.38
GC content: 48.25
Gene sequence:
>114_bases TTGATAGGAAAAAACCCAGCTGCAGCTGGGTTTTTTATTGTCATCCCTAAACCACCGCTTTTAGCGGTGGTGATTGTCCC TAGGGGCTTTTGCCCGAAAATGCGCCCATGTTAG
Upstream 100 bases:
>100_bases ACTGACCAAGGCGCAGATCCTTTCTCAAGCATCAAGTTCTGTTCTCGCACAAGCCAAGCAGGCACCCAACTCAGCACTGG CTCTTCTAGGCTAGTTCGAG
Downstream 100 bases:
>100_bases AAGACAAACTCTTATTCACCATAAGTAAGAGGATTCAAATAACATGGGCGACTACAGAAGTTCATCACACGTCTATTGGC GTTGCAAATATCATATCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 37; Mature: 37
Protein sequence:
>37_residues MIGKNPAAAGFFIVIPKPPLLAVVIVPRGFCPKMRPC
Sequences:
>Translated_37_residues MIGKNPAAAGFFIVIPKPPLLAVVIVPRGFCPKMRPC >Mature_37_residues MIGKNPAAAGFFIVIPKPPLLAVVIVPRGFCPKMRPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3950; Mature: 3950
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 10.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGKNPAAAGFFIVIPKPPLLAVVIVPRGFCPKMRPC CCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MIGKNPAAAGFFIVIPKPPLLAVVIVPRGFCPKMRPC CCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA