| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675281
Identifier: 147675281
GI number: 147675281
Start: 1766750
End: 1767253
Strand: Reverse
Name: 147675281
Synonym: VC0395_A1646
Alternate gene names: NA
Gene position: 1767253-1766750 (Counterclockwise)
Preceding gene: 147674307
Following gene: 147673545
Centisome position: 58.44
GC content: 47.42
Gene sequence:
>504_bases ATGGGACGAAATGGCTCATATGTAATGGTTGATTTGATTTGGTTAACCCCTCCTGTAATCGCAGGAGGGTCGGTTTTTGT TGTTTTGTGCATCATGCTGGCATTGTGGCGTCTTAAACGTGGTCAGCATCGTCAAAGTGAAACCTTGCGCCAACAAATTC GCAATCTGGATCGTGAGCTGCAGAAATCCAACAAACAACTGCTTGAAGTGCGTTCGGTGATGGTCGGGCTCGGACAAAAA GTCAGTGAGCAACAAGATATCATTCGCCATCTCAATGAGCGTTTACTTGAGCTGGAAAATACTGACGCGGATGCGCGTTT GTACACTCGTGCCAGTAAGATGGTGCAACTTGGTGCCGATCTCAATGAACTGATCCAAGAGTGCGAGCTGCCCAAAGCCG AAGCGGAATTGATGATGTCTTTGCAAAATAAACTGGCGGGTAAGGAATCGATTCCTCCGCTGGAAAGTCATCCCGAAGTT CGAGCCAACAAAGCCAAATCATAG
Upstream 100 bases:
>100_bases TGGGCACCGATGAAAGCTCGAAATTTATCCAAGGTGTGAGCAATCGTGATGGCAAACTACTGATTCTGGTGGATCTGAAC AAGTTCCTGACCGATGAAGA
Downstream 100 bases:
>100_bases TATGGCTTATTTCCTTGAAGCCTACTGGTAGCCAACATGACTACAGCTTCAATTAGGAAAAAGATATTCATTTGGATATG GCTCATGACTGAATGAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MGRNGSYVMVDLIWLTPPVIAGGSVFVVLCIMLALWRLKRGQHRQSETLRQQIRNLDRELQKSNKQLLEVRSVMVGLGQK VSEQQDIIRHLNERLLELENTDADARLYTRASKMVQLGADLNELIQECELPKAEAELMMSLQNKLAGKESIPPLESHPEV RANKAKS
Sequences:
>Translated_167_residues MGRNGSYVMVDLIWLTPPVIAGGSVFVVLCIMLALWRLKRGQHRQSETLRQQIRNLDRELQKSNKQLLEVRSVMVGLGQK VSEQQDIIRHLNERLLELENTDADARLYTRASKMVQLGADLNELIQECELPKAEAELMMSLQNKLAGKESIPPLESHPEV RANKAKS >Mature_166_residues GRNGSYVMVDLIWLTPPVIAGGSVFVVLCIMLALWRLKRGQHRQSETLRQQIRNLDRELQKSNKQLLEVRSVMVGLGQKV SEQQDIIRHLNERLLELENTDADARLYTRASKMVQLGADLNELIQECELPKAEAELMMSLQNKLAGKESIPPLESHPEVR ANKAKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18954; Mature: 18823
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRNGSYVMVDLIWLTPPVIAGGSVFVVLCIMLALWRLKRGQHRQSETLRQQIRNLDREL CCCCCCEEEEHHHHHCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH QKSNKQLLEVRSVMVGLGQKVSEQQDIIRHLNERLLELENTDADARLYTRASKMVQLGAD HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC LNELIQECELPKAEAELMMSLQNKLAGKESIPPLESHPEVRANKAKS HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GRNGSYVMVDLIWLTPPVIAGGSVFVVLCIMLALWRLKRGQHRQSETLRQQIRNLDREL CCCCCEEEEHHHHHCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH QKSNKQLLEVRSVMVGLGQKVSEQQDIIRHLNERLLELENTDADARLYTRASKMVQLGAD HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC LNELIQECELPKAEAELMMSLQNKLAGKESIPPLESHPEVRANKAKS HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA