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The map label for this gene is flgC [H]

Identifier: 147675208

GI number: 147675208

Start: 1899527

End: 1899943

Strand: Reverse

Name: flgC [H]

Synonym: VC0395_A1791

Alternate gene names: 147675208

Gene position: 1899943-1899527 (Counterclockwise)

Preceding gene: 147673875

Following gene: 147674438

Centisome position: 62.83

GC content: 46.28

Gene sequence:

>417_bases
ATGAGCTTATTCAGCGTATTTAATGTCACAGGTTCTGCGATGAGCGCCGAGTCGGTTCGTCTCAATACGACCTCAAGTAA
TCTGGCCAATGCTGATAGTATTAGTAGTTCAGCGAAAGATACTTACAAAGCTCGTCATGCAGTATTTGGCGCAGAGTTGA
GTAAAGCGCGTTTCAACCGCGATCCCAATGTGCCGGTGAAGGTTTTGGGGATTGTGGAAAGTGATAAACCGCTGGTCGCT
GAATTTAATCCAGAACATCCACTTGCCAATGATGAAGGCTATATCTACAAGTCCAACGTCAATGTGATGGAAGAGATGGC
CAATATGATTTCTGCCTCTCGTTCTTATCAAACCAACGTGCAGGTGGCGGATGCCAGTAAACAGATGCTGCTGCGTACGC
TGCAGATGGGTCAATAA

Upstream 100 bases:

>100_bases
AACTTGTTTATGCAAAACCAAATCCGTCACCAAGCGTCACTGGATTTTCTAGGCAGTAAATTTAAGAACTTAACCAAGTC
GCTTAAAGGGGAGTAGATCG

Downstream 100 bases:

>100_bases
GGATAAGGAGTTAACGTATGGCCGGAGTCAATAATGTTGGTCAAAGCGGCTTGTCCTATATTGATCAGCTTAAAGCTCTT
CAAGAGCAGAAAAAGCCGGA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSLFSVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKARFNRDPNVPVKVLGIVESDKPLVA
EFNPEHPLANDEGYIYKSNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQMGQ

Sequences:

>Translated_138_residues
MSLFSVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKARFNRDPNVPVKVLGIVESDKPLVA
EFNPEHPLANDEGYIYKSNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQMGQ
>Mature_137_residues
SLFSVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKARFNRDPNVPVKVLGIVESDKPLVAE
FNPEHPLANDEGYIYKSNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQMGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=141, Percent_Identity=42.5531914893617, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15051; Mature: 14920

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFSVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKARFNR
CCCEEEECCCCCCCCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
DPNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKSNVNVMEEMANMISASRSYQTNV
CCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCE
QVADASKQMLLRTLQMGQ
EEECHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLFSVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKARFNR
CCEEEECCCCCCCCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
DPNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKSNVNVMEEMANMISASRSYQTNV
CCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCE
QVADASKQMLLRTLQMGQ
EEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]